Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 4.1e-65 251.1 119 100.0
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 3.2e-57 224.9 116 92.2
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 2.7e-56 221.9 116 89.7
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 8.7e-55 216.9 116 86.2
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 1.9e-54 215.7 112 90.2
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 5.6e-54 214.2 116 86.2
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 5.6e-54 214.2 116 87.9
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 1.6e-53 212.6 120 85.8
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 4.8e-53 211.1 108 86.1
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 3.1e-52 208.4 113 80.5
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 4.0e-52 208.0 114 81.6
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 5.3e-52 207.6 112 82.1
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 1.2e-51 206.5 116 81.0
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 7.6e-51 203.8 114 80.7
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 1.3e-50 203.0 118 75.4
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.7e-50 202.6 103 88.3
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 1.7e-50 202.6 111 82.9
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 2.2e-50 202.2 110 79.1
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 4.9e-50 201.1 105 85.7
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 6.4e-50 200.7 107 81.3
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 6.4e-50 200.7 105 85.7
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 1.1e-49 199.9 107 80.4
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 1.1e-49 199.9 107 81.3
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 1.1e-49 199.9 113 77.0
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 2.4e-49 198.7 110 78.2
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 3.2e-49 198.4 107 79.4
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 4.2e-49 198.0 107 81.3
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 5.4e-49 197.6 105 84.8
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 7.1e-49 197.2 108 79.6
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 9.3e-49 196.8 111 79.3
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 9.3e-49 196.8 107 79.4
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.2e-48 196.4 107 80.4
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 1.2e-48 196.4 107 78.5
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 1.6e-48 196.1 107 78.5
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 1.6e-48 196.1 107 78.5
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 2.1e-48 195.7 107 77.6
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 2.1e-48 195.7 107 79.4
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.1e-48 195.7 109 76.1
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 2.1e-48 195.7 109 76.1
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 2.7e-48 195.3 111 81.1
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 3.5e-48 194.9 107 78.5
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 3.5e-48 194.9 105 81.0
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 6.0e-48 194.1 108 79.6
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 6.0e-48 194.1 107 79.4
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 7.9e-48 193.7 109 75.2
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 7.9e-48 193.7 107 78.5
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 7.9e-48 193.7 110 75.5
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 7.9e-48 193.7 110 78.2
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.0e-47 193.4 107 77.6
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 1.0e-47 193.4 109 78.9
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 1.0e-47 193.4 108 78.7
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 1.3e-47 193.0 102 81.4
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 1.3e-47 193.0 106 77.4
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 1.7e-47 192.6 107 77.6
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 2.3e-47 192.2 106 76.4
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 3.0e-47 191.8 107 77.6
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 5.1e-47 191.0 109 78.9
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 8.7e-47 190.3 111 75.7
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 8.7e-47 190.3 108 77.8
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 1.1e-46 189.9 108 77.8
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.5e-46 189.5 106 77.4
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 1.9e-46 189.1 102 79.4
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 1.9e-46 189.1 107 77.6
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.5e-46 188.7 107 73.8
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.5e-46 188.7 107 73.8
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 2.5e-46 188.7 108 75.9
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 3.3e-46 188.3 106 74.5
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 3.3e-46 188.3 107 76.6
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 2.8e-45 185.3 107 76.6
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 6.2e-45 184.1 151 60.9
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 6.2e-45 184.1 131 65.6
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 1.8e-44 182.6 108 74.1
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 1.8e-44 182.6 108 74.1
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 3.1e-44 181.8 136 62.5
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 4.0e-44 181.4 112 67.9
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 6.9e-44 180.6 110 74.5
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 1.5e-43 179.5 108 68.5
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 2.6e-43 178.7 106 72.6
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 7.6e-43 177.2 102 70.6
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 9.9e-43 176.8 102 74.5
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 2.2e-42 175.6 102 70.6
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 4.9e-42 174.5 106 71.7
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.1e-41 173.3 105 70.5
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 6.0e-40 167.5 98 71.4
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.5e-38 162.9 131 62.6
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 1.4e-36 156.4 99 67.7
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 1.8e-36 156.0 91 68.1
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 2.4e-36 155.6 141 51.1
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 2.4e-36 155.6 84 79.8
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 9.0e-36 153.7 111 59.5
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 5.8e-35 151.0 105 63.8
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 1.3e-34 149.8 109 57.8
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 4.2e-33 144.8 89 67.4
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 2.7e-32 142.1 112 65.2
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 2.7e-32 142.1 127 51.2
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 5.1e-31 137.9 71 90.1
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 1.5e-27 126.3 91 57.1
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 1.7e-26 122.9 129 49.6
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 3.2e-25 118.6 118 46.6
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 6.1e-24 114.4 108 51.9
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 3.9e-23 111.7 68 72.1
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.5e-22 109.8 81 59.3
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 3.3e-22 108.6 59 76.3
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 8.5e-18 94.0 88 46.6
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 3.2e-17 92.0 54 75.9
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 2.3e-07 59.3 39 66.7
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 3.9e-07 58.5 41 56.1


User provided reference genes

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