Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20939 Trifolium pratense HOM05D003044 ORTHO05D001869 3.1e-41 171.4 87 100.0
Medtr1g090340 Medicago truncatula HOM05D003044 ORTHO05D001869 6.0e-29 130.6 83 83.1
Ca_10372_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 1.2e-21 106.3 83 72.3
Ca_10422_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 1.2e-21 106.3 83 72.3
Psat6g171360 Pisum sativum HOM05D003044 ORTHO05D001869 2.7e-21 105.1 84 69.0
VMungo0720G0604 Vigna mungo HOM05D003044 ORTHO05D001869 7.8e-21 103.6 87 65.5
Lalb_Chr02g0150891 Lupinus albus HOM05D003044 ORTHO05D001869 8.6e-20 100.1 87 67.8
Phvul.007G136500 Phaseolus vulgaris HOM05D003044 ORTHO05D001869 9.5e-19 96.7 87 62.1
TPR.G19799 Trifolium pratense HOM05D003044 ORTHO05D001869 1.4e-17 92.8 87 60.9
arahy.Tifrunner.gnm1.ann1.JKR5UJ Arachis hypogaea HOM05D003044 ORTHO05D001869 4.0e-17 91.3 69 71.0
arahy.Tifrunner.gnm1.ann1.Y6HWEI Arachis hypogaea HOM05D003044 ORTHO05D001869 4.0e-17 91.3 69 71.0
Medtr1g040610 Medicago truncatula HOM05D003044 ORTHO05D001869 6.8e-17 90.5 86 60.5
Ca_18140_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 8.9e-17 90.1 87 59.8
Psat6g049400 Pisum sativum HOM05D003044 ORTHO05D001869 1.2e-16 89.7 87 58.6
Lalb_Chr01g0010681 Lupinus albus HOM05D003044 ORTHO05D001869 2.9e-15 85.1 83 57.8
Lalb_Chr19g0128991 Lupinus albus HOM05D003044 ORTHO05D001869 3.8e-15 84.7 87 59.8
Glyma.20G195200 Glycine max HOM05D003044 ORTHO05D001869 6.4e-15 84.0 70 64.3
MD02G1257800 Malus domestica HOM05D003044 ORTHO05D001869 6.4e-15 84.0 82 59.8
Haze_03430 Corylus avellana HOM05D003044 ORTHO05D001869 2.4e-14 82.0 60 73.3
Glyma.10G194700 Glycine max HOM05D003044 ORTHO05D001869 2.4e-14 82.0 74 59.5
Cfa010501 Carpinus fangiana HOM05D003044 ORTHO05D001869 3.2e-14 81.6 88 56.8
QL04p048819 Quercus lobata HOM05D003044 ORTHO05D001869 5.4e-14 80.9 76 60.5
QL04p049165 Quercus lobata HOM05D003044 ORTHO05D001869 5.4e-14 80.9 76 60.5
Lj6g0024518 Lotus japonicus HOM05D003044 ORTHO05D001869 1.6e-13 79.3 79 55.7
Prupe.2G074800 Prunus persica HOM05D003044 ORTHO05D001869 3.9e-12 74.7 82 54.9
CiPaw.13G045500 Carya illinoinensis HOM05D003044 ORTHO05D001869 5.1e-12 74.3 86 52.3
CsaV3_6G004440 Cucumis sativus L. HOM05D003044 ORTHO05D001869 5.1e-12 74.3 85 51.8
Lj5g0009221 Lotus japonicus HOM05D003044 ORTHO05D001869 8.7e-12 73.6 88 54.5
CiPaw.14G036200 Carya illinoinensis HOM05D003044 ORTHO05D001869 1.1e-11 73.2 79 58.2
MD07G1063100 Malus domestica HOM05D003044 ORTHO05D001869 1.1e-11 73.2 82 54.9
MELO3C019915.2 Cucumis melo HOM05D003044 ORTHO05D001869 1.3e-10 69.7 85 50.6
Lj2A36T50 Lonicera japonica HOM05D003044 ORTHO05D001869 1.3e-10 69.7 86 52.3
Lalb_Chr21g0312741 Lupinus albus HOM05D003044 ORTHO05D001869 1.3e-10 69.7 83 53.0
RcHm_v2.0_Chr1g0332241 Rosa chinensis HOM05D003044 ORTHO05D001869 2.1e-10 68.9 86 48.8
CSS0000792 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 2.8e-10 68.6 86 50.0
VMungo0720G1731 Vigna mungo HOM05D003044 ORTHO05D001869 3.6e-10 68.2 87 52.9
Phvul.007G233800 Phaseolus vulgaris HOM05D003044 ORTHO05D001869 8.1e-10 67.0 86 53.5
Glyma.20G070600 Glycine max HOM05D003044 ORTHO05D001869 1.1e-09 66.6 87 51.7
ClCG08G008450 Citrullus lanatus HOM05D003044 ORTHO05D001869 1.8e-09 65.9 81 51.9
FAN01G2117 Fragaria x ananassa HOM05D003044 ORTHO05D001869 1.8e-09 65.9 86 47.7
FAN06G3518 Fragaria x ananassa HOM05D003044 ORTHO05D001869 1.8e-09 65.9 86 47.7
FAN10G1738 Fragaria x ananassa HOM05D003044 ORTHO05D001869 2.4e-09 65.5 86 47.7
Lj3A920T29 Lonicera japonica HOM05D003044 ORTHO05D001869 2.4e-09 65.5 86 50.0
FvH4_7g05480 Fragaria vesca HOM05D003044 ORTHO05D001869 3.1e-09 65.1 86 47.7
FAN01G1587 Fragaria x ananassa HOM05D003044 ORTHO05D001869 3.1e-09 65.1 86 47.7
FAN03G0021 Fragaria x ananassa HOM05D003044 ORTHO05D001869 3.1e-09 65.1 86 47.7
Actinidia34738 Actinidia chinensis HOM05D003044 ORTHO05D001869 4.0e-09 64.7 79 49.4
TAR633G1492 Trochodendron aralioides HOM05D003044 ORTHO05D001869 4.0e-09 64.7 87 49.4
FAN10G0351 Fragaria x ananassa HOM05D003044 ORTHO05D001869 6.9e-09 63.9 86 47.7
Glyma.10G120200 Glycine max HOM05D003044 ORTHO05D001869 6.9e-09 63.9 87 49.4
TAR636G1345 Trochodendron aralioides HOM05D003044 ORTHO05D001869 9.0e-09 63.5 86 50.0
Actinidia31115 Actinidia chinensis HOM05D003044 ORTHO05D001869 1.5e-08 62.8 79 48.1
Sed0023754 Sechium edule HOM05D003044 ORTHO05D001869 1.5e-08 62.8 70 54.3
Dinv04420 Davidia involucrata HOM05D003044 ORTHO05D001869 2.0e-08 62.4 85 48.2
CANSAT56G3871 Cannabis sativa HOM05D003044 ORTHO05D001869 3.4e-08 61.6 70 51.4
Sed0010208 Sechium edule HOM05D003044 ORTHO05D001869 4.4e-08 61.2 70 51.4
Thecc.10G119700 Theobroma cacao HOM05D003044 ORTHO05D001869 7.6e-08 60.5 68 52.9
Duzib106G0590 Durio zibethinus HOM05D003044 ORTHO05D001869 1.7e-07 59.3 68 52.9
PGR044G1498 Punica granatum HOM05D003044 ORTHO05D001869 1.7e-07 59.3 75 46.7
Rhsim03G0094000 Rhododendron simsii HOM05D003044 ORTHO05D001869 1.7e-07 59.3 87 46.0
CDE04G3330 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 2.2e-07 58.9 83 43.4
CDE07G1072 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 3.8e-07 58.2 83 45.8
Sopen05g033570 Solanum pennellii HOM05D003044 ORTHO05D001869 3.8e-07 58.2 83 47.0
DCAR_018987 Daucus carota HOM05D003044 ORTHO05D001869 4.9e-07 57.8 85 42.4
Nn6g34609 Nelumbo nucifera HOM05D003044 ORTHO05D001869 4.9e-07 57.8 86 46.5
Nn6g34615 Nelumbo nucifera HOM05D003044 ORTHO05D001869 4.9e-07 57.8 86 46.5
Oeu015285.1 Olea europaea HOM05D003044 ORTHO05D001869 4.9e-07 57.8 86 41.9
SGA_v2.0_scaffold13G06427 Striga asiatica HOM05D003044 ORTHO05D001869 6.4e-07 57.4 82 47.6
Hma1.2p1_0153F.1_g067850 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 8.4e-07 57.0 86 47.7
GSVIVG01034601001 Vitis vinifera HOM05D003044 ORTHO05D001869 8.4e-07 57.0 69 50.7
Dinv03806 Davidia involucrata HOM05D003044 ORTHO05D001869 1.1e-06 56.6 86 47.7
FvH4_7g05430 Fragaria vesca HOM05D003044 ORTHO05D001869 1.1e-06 56.6 79 46.8
Potri.010G244700 Populus trichocarpa HOM05D003044 ORTHO05D001869 1.1e-06 56.6 82 48.8
SGA_v2.0_scaffold90G27707 Striga asiatica HOM05D003044 ORTHO05D001869 1.1e-06 56.6 86 44.2
Duzib114G0797 Durio zibethinus HOM05D003044 ORTHO05D001869 1.4e-06 56.2 68 51.5
Sabra10G0191200 Salix brachista HOM05D003044 ORTHO05D001869 2.4e-06 55.5 82 48.8
Sabra08G0009300 Salix brachista HOM05D003044 ORTHO05D001869 3.2e-06 55.1 82 50.0
Oeu040012.1 Olea europaea HOM05D003044 ORTHO05D001869 4.2e-06 54.7 88 43.2
Rhsim09G0140200 Rhododendron simsii HOM05D003044 ORTHO05D001869 4.2e-06 54.7 83 43.4
Aqoxy2G00627 Aquilegia oxysepala HOM05D003044 ORTHO05D001869 7.1e-06 53.9 73 49.3
vmacro10333 Vaccinium macrocarpon HOM05D003044 ORTHO05D001869 7.1e-06 53.9 71 47.9
Atru.chr12.1091 Acer truncatum HOM05D003044 ORTHO05D001869 9.3e-06 53.5 86 44.2
Cpa.g.sc33.124 Carica papaya HOM05D003044 ORTHO05D001869 9.3e-06 53.5 70 50.0
Duzib128G0650 Durio zibethinus HOM05D003044 ORTHO05D001869 9.3e-06 53.5 68 50.0
Solyc05g055110.4 Solanum lycopersicum HOM05D003044 ORTHO05D001869 9.3e-06 53.5 83 44.6


User provided reference genes

Program Settings