Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g120040 Pisum sativum HOM05D005347 ORTHO05D007838 7.3e-65 250.4 123 100.0
TPR.G20810 Trifolium pratense HOM05D005347 ORTHO05D030226 7.3e-65 250.4 123 100.0
TPR.G7382 Trifolium pratense HOM05D005347 ORTHO05D030226 7.3e-65 250.4 123 100.0
Ca_26018_v3 Cicer arietinum L. HOM05D005347 ORTHO05D007838 6.2e-64 247.3 123 98.4
Phvul.007G252700 Phaseolus vulgaris HOM05D005347 ORTHO05D007838 3.1e-63 245.0 123 97.6
MBI17_g13973_MAGBIO Magnolia biondii HOM05D005347 ORTHO05D007838 2.0e-62 242.3 123 95.1
SalBow6G2907 Salvia bowleyana HOM05D005347 ORTHO05D007838 2.0e-62 242.3 123 95.9
arahy.Tifrunner.gnm1.ann1.RSU8B2 Arachis hypogaea HOM05D005347 ORTHO05D007838 2.6e-62 241.9 123 95.1
arahy.Tifrunner.gnm1.ann1.XR90DA Arachis hypogaea HOM05D005347 ORTHO05D007838 2.6e-62 241.9 123 95.1
Dinv12481 Davidia involucrata HOM05D005347 ORTHO05D007838 3.4e-62 241.5 123 95.1
AUR62024447 Chenopodium quinoa HOM05D005347 ORTHO05D007838 4.4e-62 241.1 123 94.3
AUR62026037 Chenopodium quinoa HOM05D005347 ORTHO05D007838 4.4e-62 241.1 123 94.3
CsaV3_4G011730 Cucumis sativus L. HOM05D005347 ORTHO05D007838 4.4e-62 241.1 123 95.1
Glyma.03G137000 Glycine max HOM05D005347 ORTHO05D007838 4.4e-62 241.1 123 95.1
Glyma.10G097800 Glycine max HOM05D005347 ORTHO05D007838 5.8e-62 240.7 123 94.3
VMungo1383G0107 Vigna mungo HOM05D005347 ORTHO05D007838 5.8e-62 240.7 123 95.1
Actinidia38547 Actinidia chinensis HOM05D005347 ORTHO05D007838 7.6e-62 240.4 123 94.3
EL10Ac3g07089 Beta vulgaris HOM05D005347 ORTHO05D007838 7.6e-62 240.4 123 94.3
Ciclev10004154m.g Citrus clementina HOM05D005347 ORTHO05D007838 7.6e-62 240.4 123 94.3
Migut.J01759 Erythranthe guttata HOM05D005347 ORTHO05D007838 7.6e-62 240.4 123 93.5
Rhsim04G0102500 Rhododendron simsii HOM05D005347 ORTHO05D007838 7.6e-62 240.4 123 94.3
GSVIVG01033277001 Vitis vinifera HOM05D005347 ORTHO05D007838 7.6e-62 240.4 122 94.3
MELO3C023131.2 Cucumis melo HOM05D005347 ORTHO05D007838 9.9e-62 240.0 123 94.3
DCAR_013602 Daucus carota HOM05D005347 ORTHO05D007838 9.9e-62 240.0 123 94.3
Glyma.19G139300 Glycine max HOM05D005347 ORTHO05D007838 9.9e-62 240.0 123 94.3
Hund05283 Selenicereus undatus HOM05D005347 ORTHO05D007838 9.9e-62 240.0 123 94.3
CSS0016317 Camellia sinensis var. sinensis HOM05D005347 ORTHO05D007838 1.3e-61 239.6 123 94.3
CDE05G2234 Ceratophyllum demersum HOM05D005347 ORTHO05D007838 1.3e-61 239.6 123 93.5
Sed0003738 Sechium edule HOM05D005347 ORTHO05D007838 1.3e-61 239.6 123 94.3
Actinidia17237 Actinidia chinensis HOM05D005347 ORTHO05D007838 1.7e-61 239.2 123 93.5
Lalb_Chr25g0287111 Lupinus albus HOM05D005347 ORTHO05D007838 1.7e-61 239.2 121 94.2
Sabra06G0035800 Salix brachista HOM05D005347 ORTHO05D007838 1.7e-61 239.2 123 93.5
Cpa.g.sc92.51 Carica papaya HOM05D005347 ORTHO05D007838 2.2e-61 238.8 123 93.5
ClCG04G000090 Citrullus lanatus HOM05D005347 ORTHO05D007838 2.2e-61 238.8 123 93.5
MD12G1073700 Malus domestica HOM05D005347 ORTHO05D007838 2.2e-61 238.8 123 93.5
MD14G1072000 Malus domestica HOM05D005347 ORTHO05D007838 2.2e-61 238.8 123 93.5
MSTRG.10814 Avicennia marina HOM05D005347 ORTHO05D007838 2.9e-61 238.4 123 93.5
CAN.G676.69 Capsicum annuum HOM05D005347 ORTHO05D007838 2.9e-61 238.4 123 93.5
Cc06_g17100 Coffea canephora HOM05D005347 ORTHO05D007838 2.9e-61 238.4 123 93.5
Phvul.001G132200 Phaseolus vulgaris HOM05D005347 ORTHO05D007838 2.9e-61 238.4 123 93.5
Lsat_1_v5_gn_9_29020 Lactuca sativa HOM05D005347 ORTHO05D007838 3.8e-61 238.0 123 92.7
vmacro09075 Vaccinium macrocarpon HOM05D005347 ORTHO05D007838 3.8e-61 238.0 123 92.7
ECA247G2461 Erigeron canadensis HOM05D005347 ORTHO05D007838 4.9e-61 237.7 123 93.5
Lsat_1_v5_gn_9_29121 Lactuca sativa HOM05D005347 ORTHO05D007838 4.9e-61 237.7 122 92.6
Manes.08G050600 Manihot esculenta HOM05D005347 ORTHO05D007838 4.9e-61 237.7 123 92.7
Potri.006G051100 Populus trichocarpa HOM05D005347 ORTHO05D007838 4.9e-61 237.7 123 92.7
Peaxi162Scf00130g00022 Petunia axillaris HOM05D005347 ORTHO05D007838 6.4e-61 237.3 123 92.7
SGA_v2.0_scaffold105G30411 Striga asiatica HOM05D005347 ORTHO05D007838 6.4e-61 237.3 123 92.7
COL.COLO4_28282 Corchorus olitorius HOM05D005347 ORTHO05D007838 8.4e-61 236.9 123 92.7
Duzib093G0142 Durio zibethinus HOM05D005347 ORTHO05D007838 8.4e-61 236.9 123 92.7
Gohir.A09G122100 Gossypium hirsutum HOM05D005347 ORTHO05D007838 1.1e-60 236.5 123 91.9
Gohir.D09G118200 Gossypium hirsutum HOM05D005347 ORTHO05D007838 1.1e-60 236.5 123 91.9
Gorai.006G136500 Gossypium raimondii HOM05D005347 ORTHO05D007838 1.1e-60 236.5 123 91.9
Prupe.7G061100 Prunus persica HOM05D005347 ORTHO05D007838 1.1e-60 236.5 123 91.9
PGR004G1765 Punica granatum HOM05D005347 ORTHO05D007838 1.1e-60 236.5 123 92.7
HanXRQChr10g0288781 Helianthus annuus HOM05D005347 ORTHO05D007838 1.4e-60 236.1 123 91.9
HanXRQChr10g0296641 Helianthus annuus HOM05D005347 ORTHO05D007838 1.4e-60 236.1 123 91.9
Lju124A41T48 Lonicera japonica HOM05D005347 ORTHO05D007838 1.4e-60 236.1 123 92.7
Lalb_Chr20g0110491 Lupinus albus HOM05D005347 ORTHO05D007838 1.4e-60 236.1 123 91.9
Solyc04g015750.3 Solanum lycopersicum HOM05D005347 ORTHO05D007838 1.4e-60 236.1 123 91.9
Sopen04g007830 Solanum pennellii HOM05D005347 ORTHO05D007838 1.4e-60 236.1 123 91.9
PGSC0003DMG400027276 Solanum tuberosum HOM05D005347 ORTHO05D007838 1.4e-60 236.1 123 91.9
unitig_578.g15983 Utricularia gibba HOM05D005347 ORTHO05D007838 1.4e-60 236.1 123 92.7
Dinv39601 Davidia involucrata HOM05D005347 ORTHO05D007838 1.9e-60 235.7 123 91.1
Duzib128G0418 Durio zibethinus HOM05D005347 ORTHO05D007838 1.9e-60 235.7 123 91.9
TWI53G0247 Tripterygium wilfordii HOM05D005347 ORTHO05D007838 1.9e-60 235.7 123 91.9
TAR369G0825 Trochodendron aralioides HOM05D005347 ORTHO05D007838 1.9e-60 235.7 122 91.8
Aa31sc144G60 Aethionema arabicum HOM05D005347 ORTHO05D007838 2.4e-60 235.3 123 91.1
ATR0626G393 Amborella trichopoda HOM05D005347 ORTHO05D007838 2.4e-60 235.3 122 91.0
Hma1.2p1_2002F.1_g310730 Hydrangea macrophylla HOM05D005347 ORTHO05D007838 2.4e-60 235.3 123 91.9
Hma1.2p1_2002F.1_g310740 Hydrangea macrophylla HOM05D005347 ORTHO05D007838 2.4e-60 235.3 123 91.9
Nn7g36281 Nelumbo nucifera HOM05D005347 ORTHO05D007838 2.4e-60 235.3 123 91.1
Aqoxy2G00152 Aquilegia oxysepala HOM05D005347 ORTHO05D007838 3.2e-60 235.0 123 91.1
Cfa016819 Carpinus fangiana HOM05D005347 ORTHO05D007838 3.2e-60 235.0 123 91.1
Eucgr.A02348 Eucalyptus grandis HOM05D005347 ORTHO05D007838 3.2e-60 235.0 121 92.6
Lj1g0017211 Lotus japonicus HOM05D005347 ORTHO05D007838 3.2e-60 235.0 123 91.1
Oeu017946.1 Olea europaea HOM05D005347 ORTHO05D007838 5.4e-60 234.2 121 93.4
QL07p000318 Quercus lobata HOM05D005347 ORTHO05D007838 7.1e-60 233.8 122 91.0
BcaB01g05345 Brassica carinata HOM05D005347 ORTHO05D007838 9.2e-60 233.4 123 89.4
A03p06120 Brassica napus HOM05D005347 ORTHO05D007838 9.2e-60 233.4 123 89.4
C03p07120 Brassica napus HOM05D005347 ORTHO05D007838 9.2e-60 233.4 123 89.4
BolC3t13211H Brassica oleracea HOM05D005347 ORTHO05D007838 9.2e-60 233.4 123 89.4
BraA03t09944Z Brassica rapa HOM05D005347 ORTHO05D007838 9.2e-60 233.4 123 89.4
SEGI_14472 Sequoiadendron giganteum HOM05D005347 ORTHO05D007838 9.2e-60 233.4 122 90.2
Carub.0006s1179 Capsella rubella HOM05D005347 ORTHO05D007838 1.6e-59 232.6 123 89.4
Sp6g30390 Schrenkiella parvula HOM05D005347 ORTHO05D007838 1.6e-59 232.6 123 89.4
Ah.13g076460 Amaranthus hybridus HOM05D005347 ORTHO05D007838 2.1e-59 232.3 120 92.5
PSO384G4351 Papaver somniferum HOM05D005347 ORTHO05D007838 2.1e-59 232.3 123 89.4
TAR465G0003 Trochodendron aralioides HOM05D005347 ORTHO05D007838 2.1e-59 232.3 123 88.6
TAR623G1548 Trochodendron aralioides HOM05D005347 ORTHO05D007838 2.1e-59 232.3 123 88.6
Oeu008920.1 Olea europaea HOM05D005347 ORTHO05D007838 3.5e-59 231.5 123 91.1
PSO339G0901 Papaver somniferum HOM05D005347 ORTHO05D007838 4.6e-59 231.1 123 88.6
Nn2g15252 Nelumbo nucifera HOM05D005347 ORTHO05D007838 6.0e-59 230.7 123 88.6
HPP92_012089 Vanilla planifolia HOM05D005347 ORTHO05D007838 6.0e-59 230.7 123 88.6
Thhalv10012443m.g Eutrema salsugineum HOM05D005347 ORTHO05D007838 1.0e-58 229.9 123 87.8
AL6G24240 Arabidopsis lyrata HOM05D005347 ORTHO05D007838 1.3e-58 229.6 123 87.8
AT5G13630 Arabidopsis thaliana HOM05D005347 ORTHO05D007838 1.3e-58 229.6 123 87.8
FvH4_6g23800 Fragaria vesca HOM05D005347 ORTHO05D007838 1.3e-58 229.6 123 89.4
FAN02G3940 Fragaria x ananassa HOM05D005347 ORTHO05D007838 1.3e-58 229.6 123 89.4
FAN09G2062 Fragaria x ananassa HOM05D005347 ORTHO05D007838 1.3e-58 229.6 123 89.4
FAN14G0383 Fragaria x ananassa HOM05D005347 ORTHO05D007838 1.3e-58 229.6 123 89.4
CARHR199810 Cardamine hirsuta HOM05D005347 ORTHO05D007838 2.3e-58 228.8 123 87.8
FAN05G5756 Fragaria x ananassa HOM05D005347 ORTHO05D007838 2.3e-58 228.8 123 89.4
RcHm_v2.0_Chr3g0482331 Rosa chinensis HOM05D005347 ORTHO05D007838 2.3e-58 228.8 123 88.6
Zm00001eb433610 Zea mays HOM05D005347 ORTHO05D007838 5.1e-58 227.6 123 87.8
AagrBONN_evm.TU.Sc2ySwM_368.2268 Anthoceros agrestis HOM05D005347 ORTHO05D007838 1.5e-57 226.1 123 86.2
SMO347G0130 Selaginella moellendorffii HOM05D005347 ORTHO05D007838 1.5e-57 226.1 122 86.9
Mapoly0008s0194 Marchantia polymorpha HOM05D005347 ORTHO05D007838 1.9e-57 225.7 123 86.2
Pp3c10_13960 Physcomitrium patens HOM05D005347 ORTHO05D007838 1.9e-57 225.7 123 86.2
Pp3c10_13970 Physcomitrium patens HOM05D005347 ORTHO05D007838 1.9e-57 225.7 123 86.2
Atru.chr1.1096 Acer truncatum HOM05D005347 ORTHO05D007838 4.3e-57 224.6 123 86.2
CBR_g40549 Chara braunii HOM05D005347 ORTHO05D007838 1.6e-56 222.6 123 84.6
Cre07.g325500 Chlamydomonas reinhardtii HOM05D005347 ORTHO05D007838 5.4e-52 207.6 121 77.7
MCO07G263 Micromonas commoda HOM05D005347 ORTHO05D007838 7.1e-52 207.2 123 77.2
Haze_19858 Corylus avellana HOM05D005347 ORTHO05D007838 1.2e-51 206.5 115 85.2
Os07g0656500 Oryza sativa ssp. japonica HOM05D005347 ORTHO05D007838 1.2e-38 163.3 94 84.0
MCO07G355 Micromonas commoda HOM05D005347 ORTHO05D034305 1.9e-28 129.4 120 47.5
Nn7g36276 Nelumbo nucifera HOM05D005347 ORTHO05D030226 2.1e-27 125.9 95 67.4
Pp3c5_16660 Physcomitrium patens HOM05D005347 ORTHO05D030226 6.0e-27 124.4 88 71.6
Cre11.g477625 Chlamydomonas reinhardtii HOM05D005347 ORTHO05D034305 1.3e-24 116.7 120 42.5
CBR_g6691 Chara braunii HOM05D005347 ORTHO05D034305 3.1e-23 112.1 120 40.8
TPR.G10615 Trifolium pratense HOM05D005347 ORTHO05D007838 1.8e-10 69.7 33 97.0


User provided reference genes

Program Settings