Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 2.9e-271 937.9 466 100.0
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 5.2e-220 767.7 465 81.9
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 5.5e-206 721.1 469 78.3
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 1.9e-198 696.0 489 72.8
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.9e-198 696.0 485 73.8
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 5.5e-198 694.5 485 73.6
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.6e-197 693.0 483 73.7
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 1.4e-196 689.9 490 72.0
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 6.8e-196 687.6 485 73.0
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 1.3e-194 683.3 490 71.6
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 2.8e-194 682.2 490 71.4
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 5.4e-193 677.9 487 71.5
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 1.1e-190 670.2 488 70.5
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 1.9e-190 669.5 490 69.6
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 3.3e-190 668.7 490 70.8
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 2.1e-189 666.0 490 70.4
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 6.1e-189 664.5 490 69.4
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 8.0e-189 664.1 489 69.1
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 2.3e-188 662.5 488 70.3
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 2.3e-188 662.5 487 70.4
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 1.5e-187 659.8 491 68.2
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 7.5e-187 657.5 485 69.1
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 2.2e-186 656.0 488 68.4
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 4.9e-186 654.8 479 69.9
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 6.4e-186 654.4 482 69.1
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 1.1e-185 653.7 490 67.3
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 4.1e-185 651.7 487 68.2
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 7.0e-185 651.0 488 68.2
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 9.2e-185 650.6 489 67.9
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 9.2e-185 650.6 490 68.2
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 1.6e-184 649.8 484 68.2
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 3.5e-184 648.7 469 69.7
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 6.0e-184 647.9 479 68.9
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 6.0e-184 647.9 485 68.5
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 7.8e-184 647.5 495 67.7
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 1.7e-183 646.4 488 67.8
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 3.0e-183 645.6 475 68.4
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 3.9e-183 645.2 475 68.6
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 5.0e-183 644.8 490 66.7
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 5.0e-183 644.8 495 67.3
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 5.0e-183 644.8 495 67.7
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 1.1e-182 643.7 490 67.6
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 1.5e-182 643.3 492 67.3
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 1.5e-182 643.3 493 67.7
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 1.2e-181 640.2 489 66.7
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 1.6e-181 639.8 499 65.9
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 2.1e-181 639.4 483 68.7
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 4.7e-181 638.3 492 66.7
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 8.0e-181 637.5 490 66.3
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 8.0e-181 637.5 476 67.2
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 1.4e-180 636.7 484 66.9
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 1.8e-180 636.3 488 67.2
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 2.3e-180 636.0 485 67.2
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 3.1e-180 635.6 482 67.8
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 4.0e-180 635.2 485 67.2
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 5.2e-180 634.8 488 67.8
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 8.9e-180 634.0 485 66.2
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 1.2e-179 633.6 485 67.2
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 1.5e-179 633.3 485 66.8
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 2.0e-179 632.9 490 66.9
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 2.6e-179 632.5 485 66.6
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 2.6e-179 632.5 482 67.2
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 2.6e-179 632.5 485 67.0
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 3.4e-179 632.1 481 67.6
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 4.4e-179 631.7 486 67.1
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 4.4e-179 631.7 485 66.6
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 4.4e-179 631.7 486 66.5
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 4.4e-179 631.7 486 66.5
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 5.8e-179 631.3 489 68.5
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 1.3e-178 630.2 486 67.9
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 1.3e-178 630.2 486 67.9
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 1.7e-178 629.8 482 66.2
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 1.7e-178 629.8 485 66.2
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 2.2e-178 629.4 489 66.9
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 2.2e-178 629.4 486 66.0
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 2.2e-178 629.4 486 67.5
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 3.7e-178 628.6 469 68.4
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 4.9e-178 628.2 485 66.0
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 6.4e-178 627.9 486 66.0
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 1.4e-177 626.7 490 66.3
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 1.9e-177 626.3 482 66.6
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 5.4e-177 624.8 488 65.8
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 5.4e-177 624.8 483 66.0
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 5.4e-177 624.8 483 66.0
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 2.1e-176 622.9 528 62.9
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 2.7e-176 622.5 488 65.6
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 2.7e-176 622.5 488 65.6
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 3.5e-176 622.1 485 66.0
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 7.8e-176 620.9 509 63.9
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 1.7e-175 619.8 485 65.2
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 3.0e-175 619.0 499 64.9
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 6.6e-175 617.8 496 64.1
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 4.3e-174 615.1 488 65.0
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 9.5e-174 614.0 488 65.0
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 1.6e-173 613.2 482 66.4
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 2.8e-173 612.5 487 64.5
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 2.8e-173 612.5 487 64.5
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 1.2e-171 607.1 485 64.9
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 1.3e-170 603.6 498 61.4
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 7.8e-168 594.3 525 61.5
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 1.0e-167 594.0 490 62.2
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 2.3e-167 592.8 492 61.0
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 1.1e-166 590.5 486 63.2
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 2.5e-166 589.3 492 60.6
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 5.6e-166 588.2 489 62.0
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 2.8e-165 585.9 472 62.7
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 8.9e-164 580.9 489 61.6
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 3.4e-163 578.9 483 60.2
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 1.7e-162 576.6 515 59.6
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 1.9e-161 573.2 456 64.5
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 2.7e-160 569.3 457 63.7
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 6.0e-160 568.2 498 58.0
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 3.9e-159 565.5 494 60.5
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 9.6e-158 560.8 568 55.8
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 1.6e-157 560.1 512 58.8
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 1.6e-157 560.1 488 63.1
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 8.1e-157 557.8 490 61.8
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 5.8e-155 551.6 490 61.6
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 9.9e-155 550.8 498 55.6
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 8.4e-154 547.7 489 57.7
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 1.1e-153 547.4 479 57.2
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 1.9e-153 546.6 498 55.2
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.0e-151 540.8 397 70.0
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 1.4e-148 530.4 435 63.4
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 5.4e-145 518.5 375 73.3
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 2.0e-139 500.0 443 56.4
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 1.0e-138 497.7 500 57.2
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 1.4e-137 493.8 508 51.4
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 2.3e-135 486.5 359 71.0
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 9.6e-134 481.1 345 72.5
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 1.6e-133 480.3 494 51.4
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 6.2e-133 478.4 379 66.5
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 2.2e-130 469.9 395 64.6
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 6.5e-130 468.4 393 61.3
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 3.9e-127 459.1 540 50.2
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 8.5e-122 441.4 352 65.3
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 9.4e-121 438.0 357 65.0
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.2e-120 437.6 380 64.5
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 1.7e-114 417.2 372 61.0
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 5.1e-111 405.6 282 74.1
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 3.7e-109 399.4 468 47.0
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.5e-105 387.5 272 72.8
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 8.8e-103 378.3 300 65.3
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 7.0e-100 368.6 295 63.7
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 7.7e-99 365.2 277 69.0
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 4.6e-75 286.2 248 60.1
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 4.7e-72 276.2 189 74.1
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 2.6e-70 270.4 464 35.8
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 4.4e-70 269.6 173 76.9
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 1.3e-69 268.1 246 61.8
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 6.0e-59 232.6 206 61.7
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 1.8e-55 221.1 200 57.0
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 1.1e-47 195.3 228 49.1
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 8.9e-47 192.2 137 71.5
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 4.4e-46 189.9 134 70.1
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 3.8e-45 186.8 233 46.8
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 1.4e-44 184.9 134 70.1
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 1.2e-43 181.8 150 64.7
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 6.2e-40 169.5 255 45.9
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 5.3e-39 166.4 116 69.8
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 2.4e-36 157.5 128 59.4
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 3.2e-36 157.1 125 64.0
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.1e-33 148.7 116 64.7
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 1.1e-28 132.1 122 54.1
Phvul.L001639 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 1.2e-27 128.6 95 63.2
Phvul.L008801 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 1.2e-27 128.6 95 63.2
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 3.8e-21 107.1 97 61.9
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 4.9e-21 106.7 65 81.5
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 4.2e-20 103.6 65 78.5
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 5.5e-20 103.2 170 42.4
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.2e-19 102.1 65 76.9
ClCG01G009330 Citrullus lanatus HOM05D003643 ORTHO05D018815 7.9e-19 99.4 63 76.2
Haze_13621 Corylus avellana HOM05D003643 ORTHO05D018815 7.9e-19 99.4 65 70.8
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 2.3e-18 97.8 65 81.5
Cc11_g00920 Coffea canephora HOM05D003643 ORTHO05D005001 1.5e-17 95.1 67 68.7
Gohir.A10G145401 Gossypium hirsutum HOM05D003643 ORTHO05D018815 2.5e-17 94.4 59 76.3
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 3.3e-17 94.0 77 66.2
CSS0023685 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 1.6e-16 91.7 67 67.2
Haze_13619 Corylus avellana HOM05D003643 ORTHO05D034905 1.2e-11 75.5 92 44.6
CSS0032340 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 7.4e-09 66.2 46 60.9


User provided reference genes

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