Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20777 Trifolium pratense HOM05D000588 ORTHO05D004275 1.6e-57 226.1 131 100.0
TPR.G690 Trifolium pratense HOM05D000588 ORTHO05D004275 3.7e-51 204.9 127 93.7
TPR.G40127 Trifolium pratense HOM05D000588 ORTHO05D004275 7.6e-28 127.5 94 70.2
TPR.G30924 Trifolium pratense HOM05D000588 ORTHO05D004275 2.5e-18 95.9 129 49.6
Lalb_Chr20g0114361 Lupinus albus HOM05D000588 ORTHO05D004275 2.1e-09 66.2 91 42.9
Medtr2g437700 Medicago truncatula HOM05D000588 ORTHO05D004275 1.0e-08 63.9 85 43.5
TPR.G30928 Trifolium pratense HOM05D000588 ORTHO05D004275 1.3e-08 63.5 101 38.6
Psat1g151360 Pisum sativum HOM05D000588 ORTHO05D004275 3.0e-08 62.4 85 42.4
FAN25G0853 Fragaria x ananassa HOM05D000588 ORTHO05D004275 6.7e-08 61.2 91 40.7
Lj6g0012231 Lotus japonicus HOM05D000588 ORTHO05D004275 6.7e-08 61.2 82 42.7
Ca_02403_v3 Cicer arietinum L. HOM05D000588 ORTHO05D004275 1.1e-07 60.5 121 34.7
Medtr2g018340 Medicago truncatula HOM05D000588 ORTHO05D004275 1.1e-07 60.5 85 36.5
FvH4_3g36000 Fragaria vesca HOM05D000588 ORTHO05D004275 1.5e-07 60.1 91 40.7
FAN16G3196 Fragaria x ananassa HOM05D000588 ORTHO05D004275 1.5e-07 60.1 91 40.7
FAN21G1353 Fragaria x ananassa HOM05D000588 ORTHO05D004275 1.5e-07 60.1 91 40.7
Nn3g19645 Nelumbo nucifera HOM05D000588 ORTHO05D004275 1.9e-07 59.7 82 39.0
arahy.Tifrunner.gnm1.ann1.42PK2U Arachis hypogaea HOM05D000588 ORTHO05D004275 2.5e-07 59.3 120 34.2
arahy.Tifrunner.gnm1.ann1.60SBBK Arachis hypogaea HOM05D000588 ORTHO05D004275 2.5e-07 59.3 120 34.2
FAN11G0300 Fragaria x ananassa HOM05D000588 ORTHO05D004275 4.3e-07 58.5 91 40.7
THA.LOC104815792 Tarenaya hassleriana HOM05D000588 ORTHO05D004275 4.3e-07 58.5 124 33.1
Actinidia23942 Actinidia chinensis HOM05D000588 ORTHO05D004275 5.7e-07 58.2 91 38.5
Glyma.09G048100 Glycine max HOM05D000588 ORTHO05D004275 5.7e-07 58.2 119 34.5
Manes.04G034700 Manihot esculenta HOM05D000588 ORTHO05D004275 5.7e-07 58.2 113 35.4
THA.LOC104810781 Tarenaya hassleriana HOM05D000588 ORTHO05D004275 5.7e-07 58.2 84 39.3
TWI31G1202 Tripterygium wilfordii HOM05D000588 ORTHO05D004275 5.7e-07 58.2 88 38.6
Atru.chr3.3897 Acer truncatum HOM05D000588 ORTHO05D004275 7.4e-07 57.8 119 35.3
Phvul.009G244800 Phaseolus vulgaris HOM05D000588 ORTHO05D004275 7.4e-07 57.8 82 41.5
THA.LOC104799443 Tarenaya hassleriana HOM05D000588 ORTHO05D004275 7.4e-07 57.8 104 36.5
TPR.G22191 Trifolium pratense HOM05D000588 ORTHO05D004275 7.4e-07 57.8 85 37.6
VMungo1309G0153 Vigna mungo HOM05D000588 ORTHO05D004275 7.4e-07 57.8 119 35.3
AL5G25410 Arabidopsis lyrata HOM05D000588 ORTHO05D004275 9.7e-07 57.4 94 38.3
Cc01_g12820 Coffea canephora HOM05D000588 ORTHO05D004275 9.7e-07 57.4 91 38.5
Glyma.15G155400 Glycine max HOM05D000588 ORTHO05D004275 9.7e-07 57.4 119 34.5
Nn2g10372 Nelumbo nucifera HOM05D000588 ORTHO05D004275 1.3e-06 57.0 82 40.2
Manes.11G130800 Manihot esculenta HOM05D000588 ORTHO05D004275 1.6e-06 56.6 82 41.5
RcHm_v2.0_Chr5g0064411 Rosa chinensis HOM05D000588 ORTHO05D004275 1.6e-06 56.6 83 38.6
CARHR155250 Cardamine hirsuta HOM05D000588 ORTHO05D004275 2.2e-06 56.2 96 36.5
Eucgr.B02370 Eucalyptus grandis HOM05D000588 ORTHO05D004275 2.2e-06 56.2 82 40.2
Lalb_Chr15g0083661 Lupinus albus HOM05D000588 ORTHO05D004275 2.2e-06 56.2 87 37.9
CiPaw.13G094900 Carya illinoinensis HOM05D000588 ORTHO05D004275 2.8e-06 55.8 92 39.1
CDE07G0122 Ceratophyllum demersum HOM05D000588 ORTHO05D004275 2.8e-06 55.8 87 37.9
TPR.G22197 Trifolium pratense HOM05D000588 ORTHO05D004275 2.8e-06 55.8 83 43.4
CDE04G3587 Ceratophyllum demersum HOM05D000588 ORTHO05D004275 3.7e-06 55.5 87 37.9
MELO3C020643.2 Cucumis melo HOM05D000588 ORTHO05D004275 3.7e-06 55.5 119 31.1
CsaV3_1G034110 Cucumis sativus L. HOM05D000588 ORTHO05D004275 3.7e-06 55.5 119 31.1
Nn5g26920 Nelumbo nucifera HOM05D000588 ORTHO05D004275 3.7e-06 55.5 82 37.8
Rhsim01G0227300 Rhododendron simsii HOM05D000588 ORTHO05D004275 3.7e-06 55.5 82 41.5
Aa31LG4G15550 Aethionema arabicum HOM05D000588 ORTHO05D004275 4.8e-06 55.1 81 39.5
AT3G46550 Arabidopsis thaliana HOM05D000588 ORTHO05D004275 4.8e-06 55.1 81 39.5
COL.COLO4_18502 Corchorus olitorius HOM05D000588 ORTHO05D004275 4.8e-06 55.1 114 34.2
SEGI_34657 Sequoiadendron giganteum HOM05D000588 ORTHO05D004275 4.8e-06 55.1 83 37.3
SEGI_38266 Sequoiadendron giganteum HOM05D000588 ORTHO05D004275 4.8e-06 55.1 83 39.8
Actinidia37205 Actinidia chinensis HOM05D000588 ORTHO05D004275 6.3e-06 54.7 91 37.4
Carub.0005s1282 Capsella rubella HOM05D000588 ORTHO05D004275 8.2e-06 54.3 88 36.4
Haze_24091 Corylus avellana HOM05D000588 ORTHO05D004275 8.2e-06 54.3 82 39.0
Lj1P154T18 Lonicera japonica HOM05D000588 ORTHO05D004275 8.2e-06 54.3 82 39.0
PSO339G2986 Papaver somniferum HOM05D000588 ORTHO05D004275 8.2e-06 54.3 82 36.6
PSO384G2134 Papaver somniferum HOM05D000588 ORTHO05D004275 8.2e-06 54.3 82 36.6
TAR625G0646 Trochodendron aralioides HOM05D000588 ORTHO05D004275 8.2e-06 54.3 83 37.3


User provided reference genes

Program Settings