Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20720 Trifolium pratense HOM05D000092 ORTHO05D005910 8.3e-126 453.8 235 100.0
Medtr3g062420 Medicago truncatula HOM05D000092 ORTHO05D005910 2.0e-63 246.5 290 53.4
TPR.G34177 Trifolium pratense HOM05D000092 ORTHO05D005910 1.6e-60 236.9 279 52.3
Medtr3g451150 Medicago truncatula HOM05D000092 ORTHO05D005910 4.6e-60 235.3 239 58.6
Medtr3g452250 Medicago truncatula HOM05D000092 ORTHO05D005910 4.6e-60 235.3 239 58.6
TPR.G24935 Trifolium pratense HOM05D000092 ORTHO05D000042 6.1e-60 235.0 245 58.4
Psat5g155080 Pisum sativum HOM05D000092 ORTHO05D005910 5.7e-58 228.4 252 53.6
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.5e-55 220.3 258 53.1
Medtr3g062400 Medicago truncatula HOM05D000092 ORTHO05D005910 2.0e-55 219.9 205 62.0
TPR.G13544 Trifolium pratense HOM05D000092 ORTHO05D005910 1.0e-54 217.6 125 89.6
Ca_15035_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 1.3e-54 217.2 353 46.2
Medtr0922s0020 Medicago truncatula HOM05D000092 ORTHO05D005910 4.2e-53 212.2 213 57.7
TPR.G5137 Trifolium pratense HOM05D000092 ORTHO05D005910 4.2e-53 212.2 258 51.2
Ca_14170_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 9.4e-53 211.1 258 51.2
Ca_30441_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 3.9e-51 205.7 242 52.9
Medtr3g062340 Medicago truncatula HOM05D000092 ORTHO05D005910 3.9e-51 205.7 260 50.8
Medtr3g435040 Medicago truncatula HOM05D000092 ORTHO05D005910 4.4e-50 202.2 238 52.5
Ca_27780_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 7.4e-50 201.4 265 48.3
Medtr3g062140 Medicago truncatula HOM05D000092 ORTHO05D005910 7.4e-50 201.4 260 48.8
Medtr3g062180 Medicago truncatula HOM05D000092 ORTHO05D005910 7.4e-50 201.4 260 48.8
TPR.G35834 Trifolium pratense HOM05D000092 ORTHO05D005910 9.7e-50 201.1 266 49.2
Psat5g150000 Pisum sativum HOM05D000092 ORTHO05D005910 3.8e-46 189.1 234 51.3
Ca_14166_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 8.5e-46 188.0 233 49.8
TPR.G5820 Trifolium pratense HOM05D000092 ORTHO05D005910 2.1e-44 183.3 174 60.3
TPR.G35609 Trifolium pratense HOM05D000092 ORTHO05D005910 2.7e-44 183.0 251 48.6
Ca_15038_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 3.6e-44 182.6 430 35.3
Medtr3g464870 Medicago truncatula HOM05D000092 ORTHO05D005910 5.2e-43 178.7 269 46.1
Medtr3g466750 Medicago truncatula HOM05D000092 ORTHO05D005910 2.0e-42 176.8 261 45.6
Medtr7g026240 Medicago truncatula HOM05D000092 ORTHO05D005910 2.2e-41 173.3 254 44.9
Medtr3g464950 Medicago truncatula HOM05D000092 ORTHO05D000042 1.1e-40 171.0 264 44.3
TPR.G20384 Trifolium pratense HOM05D000092 ORTHO05D005910 1.1e-40 171.0 241 45.6
Psat7g235480 Pisum sativum HOM05D000092 ORTHO05D005910 1.4e-40 170.6 145 63.4
Medtr2g049960 Medicago truncatula HOM05D000092 ORTHO05D005910 7.0e-40 168.3 248 43.1
Medtr3g027360 Medicago truncatula HOM05D000092 ORTHO05D005910 3.5e-39 166.0 185 53.5
Medtr3g464920 Medicago truncatula HOM05D000092 ORTHO05D000042 1.1e-37 161.0 267 43.4
Ca_15039_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 3.2e-37 159.5 207 48.8
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 4.2e-37 159.1 259 43.6
Medtr3g464810 Medicago truncatula HOM05D000092 ORTHO05D000042 7.2e-37 158.3 209 45.9
Ca_14011_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.2e-36 157.5 244 44.3
Phvul.010G023400 Phaseolus vulgaris HOM05D000092 ORTHO05D005910 1.6e-36 157.1 129 63.6
Medtr1147s0010 Medicago truncatula HOM05D000092 ORTHO05D005910 3.6e-36 156.0 154 59.1
Medtr3g062320 Medicago truncatula HOM05D000092 ORTHO05D005910 6.1e-36 155.2 174 52.9
Medtr3g062010 Medicago truncatula HOM05D000092 ORTHO05D000042 1.0e-35 154.5 209 48.8
TPR.G27793 Trifolium pratense HOM05D000092 ORTHO05D005910 1.8e-35 153.7 235 44.7
TPR.G40621 Trifolium pratense HOM05D000092 ORTHO05D005910 6.8e-35 151.8 145 57.2
TPR.G15149 Trifolium pratense HOM05D000092 ORTHO05D005910 8.8e-35 151.4 237 45.1
Medtr3g063010 Medicago truncatula HOM05D000092 ORTHO05D005910 2.2e-33 146.7 134 59.7
Ca_14165_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.4e-32 144.1 195 48.7
Medtr3g062130 Medicago truncatula HOM05D000092 ORTHO05D005910 1.2e-31 141.0 221 42.1
Medtr3g062980 Medicago truncatula HOM05D000092 ORTHO05D005910 1.2e-31 141.0 143 58.0
TPR.G40185 Trifolium pratense HOM05D000092 ORTHO05D005910 1.6e-28 130.6 212 46.7
Medtr2g451270 Medicago truncatula HOM05D000092 ORTHO05D005910 4.0e-27 125.9 221 40.3
Medtr2g023000 Medicago truncatula HOM05D000092 ORTHO05D005910 1.4e-24 117.5 165 48.5
TPR.G35072 Trifolium pratense HOM05D000092 ORTHO05D005910 2.0e-23 113.6 117 57.3
TPR.G23432 Trifolium pratense HOM05D000092 ORTHO05D005910 2.9e-22 109.8 111 57.7
VMungo0331G0363 Vigna mungo HOM05D000092 ORTHO05D000042 9.5e-21 104.8 130 47.7
Psat5g150040 Pisum sativum HOM05D000092 ORTHO05D005910 1.2e-20 104.4 66 75.8
Medtr3g069220 Medicago truncatula HOM05D000092 ORTHO05D005910 3.0e-19 99.8 69 71.0
Medtr2g450490 Medicago truncatula HOM05D000092 ORTHO05D005910 2.0e-18 97.1 201 34.8
Medtr3g048690 Medicago truncatula HOM05D000092 ORTHO05D000042 9.8e-18 94.7 90 60.0
Medtr3g466550 Medicago truncatula HOM05D000092 ORTHO05D005910 6.4e-17 92.0 92 52.2
Psat5g155000 Pisum sativum HOM05D000092 ORTHO05D005910 1.3e-14 84.3 152 39.5
Psat5g149920 Pisum sativum HOM05D000092 ORTHO05D005910 8.6e-14 81.6 143 41.3
Medtr3g063320 Medicago truncatula HOM05D000092 ORTHO05D005910 8.0e-12 75.1 81 51.9
TPR.G29423 Trifolium pratense HOM05D000092 ORTHO05D005910 4.0e-11 72.8 199 33.7
TPR.G20665 Trifolium pratense HOM05D008660 ORTHO05D005910 3.7e-09 66.2 289 30.1
TPR.G39391 Trifolium pratense HOM05D000092 ORTHO05D005910 4.9e-09 65.9 136 37.5
TPR.G40329 Trifolium pratense HOM05D000092 ORTHO05D000042 1.2e-07 61.2 63 55.6
Medtr3g466590 Medicago truncatula HOM05D008660 ORTHO05D013095 6.6e-06 55.5 47 57.4


User provided reference genes

Program Settings