Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20716 Trifolium pratense HOM05D000092 ORTHO05D025023 1.2e-58 229.6 115 100.0
Psat5g155000 Pisum sativum HOM05D000092 ORTHO05D005910 7.6e-24 114.0 94 64.9
Psat5g156160 Pisum sativum HOM05D000092 ORTHO05D000042 7.6e-24 114.0 94 64.9
Psat5g154880 Pisum sativum HOM05D000092 ORTHO05D025023 6.5e-23 110.9 65 83.1
Medtr3g062970 Medicago truncatula HOM05D000092 ORTHO05D000042 1.4e-22 109.8 94 60.6
Medtr3g451150 Medicago truncatula HOM05D000092 ORTHO05D005910 5.5e-22 107.8 117 53.0
Medtr3g452250 Medicago truncatula HOM05D000092 ORTHO05D005910 5.5e-22 107.8 117 53.0
Ca_15035_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 1.6e-21 106.3 65 80.0
Medtr3g062220 Medicago truncatula HOM05D000092 ORTHO05D000042 3.5e-21 105.1 65 76.9
Medtr7g026250 Medicago truncatula HOM05D000092 ORTHO05D000042 4.6e-21 104.8 65 78.5
Medtr3g062990 Medicago truncatula HOM05D000092 ORTHO05D000042 7.9e-21 104.0 94 59.6
Medtr3g062090 Medicago truncatula HOM05D000092 ORTHO05D013095 3.0e-20 102.1 94 57.4
Medtr3g063010 Medicago truncatula HOM05D000092 ORTHO05D005910 3.9e-20 101.7 85 62.4
Medtr3g062420 Medicago truncatula HOM05D000092 ORTHO05D005910 6.7e-20 100.9 65 75.4
Medtr3g062020 Medicago truncatula HOM05D000092 ORTHO05D000042 8.7e-20 100.5 65 73.8
Medtr3g062320 Medicago truncatula HOM05D000092 ORTHO05D005910 1.1e-19 100.1 94 56.4
Ca_31152_v3 Cicer arietinum L. HOM05D000092 ORTHO05D025023 3.3e-19 98.6 99 52.5
Medtr3g062340 Medicago truncatula HOM05D000092 ORTHO05D005910 3.3e-19 98.6 94 55.3
Ca_15037_v3 Cicer arietinum L. HOM05D000092 ORTHO05D025023 9.7e-19 97.1 85 60.0
Ca_29814_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 9.7e-19 97.1 85 60.0
Medtr3g062010 Medicago truncatula HOM05D000092 ORTHO05D000042 4.8e-18 94.7 65 69.2
Medtr0067s0070 Medicago truncatula HOM05D000092 ORTHO05D000042 1.1e-17 93.6 94 54.3
Medtr3g435040 Medicago truncatula HOM05D000092 ORTHO05D005910 1.1e-17 93.6 94 54.3
Medtr4g027135 Medicago truncatula HOM05D000092 ORTHO05D025023 4.5e-16 88.2 65 67.7
Medtr4g027255 Medicago truncatula HOM05D000092 ORTHO05D000042 4.5e-16 88.2 65 67.7
Medtr3g062140 Medicago truncatula HOM05D000092 ORTHO05D005910 5.0e-15 84.7 65 63.1
Ca_14169_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 6.5e-15 84.3 65 63.1
Psat5g150080 Pisum sativum HOM05D000092 ORTHO05D000042 5.5e-14 81.3 65 63.1
Medtr3g031750 Medicago truncatula HOM05D000092 ORTHO05D013095 6.1e-13 77.8 88 50.0
TPR.G5137 Trifolium pratense HOM05D000092 ORTHO05D005910 2.5e-11 72.4 65 55.4
Ca_15036_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 3.3e-11 72.0 47 72.3
Medtr3g467340 Medicago truncatula HOM05D000092 ORTHO05D000042 5.7e-11 71.2 63 54.0
Lj1g0016459 Lotus japonicus HOM05D000092 ORTHO05D000042 2.8e-10 68.9 67 47.8
Medtr3g464950 Medicago truncatula HOM05D000092 ORTHO05D000042 1.4e-09 66.6 94 36.2
Ca_14011_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.8e-09 66.2 94 39.4
Lj2g0015463 Lotus japonicus HOM05D000092 ORTHO05D000042 2.4e-09 65.9 63 52.4
VMungo0331G0363 Vigna mungo HOM05D000092 ORTHO05D000042 1.5e-08 63.2 65 44.6
Medtr0043s0110 Medicago truncatula HOM05D000092 ORTHO05D000042 2.0e-08 62.8 94 35.1
VMungo0331G0289 Vigna mungo HOM05D000092 ORTHO05D000042 2.0e-08 62.8 65 46.2
Medtr3g464810 Medicago truncatula HOM05D000092 ORTHO05D000042 2.6e-08 62.4 65 44.6
Medtr3g464870 Medicago truncatula HOM05D000092 ORTHO05D005910 4.5e-08 61.6 94 35.1
Medtr3g464920 Medicago truncatula HOM05D000092 ORTHO05D000042 4.5e-08 61.6 94 35.1
Medtr0912s0010 Medicago truncatula HOM05D000092 ORTHO05D000042 5.9e-08 61.2 94 36.2
Medtr3g466750 Medicago truncatula HOM05D000092 ORTHO05D005910 5.9e-08 61.2 94 43.6
Phvul.010G023200 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 5.9e-08 61.2 65 44.6
Medtr3g466580 Medicago truncatula HOM05D000092 ORTHO05D000042 1.0e-07 60.5 65 44.6
VMungo0331G0794 Vigna mungo HOM05D000092 ORTHO05D000042 1.7e-07 59.7 65 41.5
Phvul.010G023100 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 3.8e-07 58.5 66 42.4
Medtr3g466710 Medicago truncatula HOM05D000092 ORTHO05D000042 5.0e-07 58.2 66 53.0
Medtr3g466520 Medicago truncatula HOM05D000092 ORTHO05D000042 1.4e-06 56.6 105 34.3
Phvul.010G025100 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 2.5e-06 55.8 65 40.0
Medtr3g466620 Medicago truncatula HOM05D000092 ORTHO05D000042 4.2e-06 55.1 94 31.9
Medtr3g451650 Medicago truncatula HOM05D000092 ORTHO05D000042 9.4e-06 53.9 87 33.3


User provided reference genes

Program Settings