Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20651 Trifolium pratense HOM05D007594 ORTHO05D009607 4.7e-230 800.8 402 100.0
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 6.1e-193 677.6 403 86.4
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 1.4e-181 639.8 405 82.2
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 2.6e-159 565.8 404 72.3
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 1.1e-154 550.4 411 72.3
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 9.2e-149 530.8 411 69.6
VMungo1080G0650 Vigna mungo HOM05D007594 ORTHO05D009607 4.4e-143 511.9 411 67.6
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 7.3e-130 468.0 403 62.5
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 7.5e-127 458.0 403 61.8
TPR.G1438 Trifolium pratense HOM05D007594 ORTHO05D009607 1.3e-115 420.6 222 97.7
Ca_14092_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 1.1e-106 391.0 257 80.9
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 6.5e-86 322.0 358 50.0
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 1.1e-85 321.2 403 45.7
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 2.5e-85 320.1 371 47.2
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 6.0e-84 315.5 418 44.0
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 3.9e-83 312.8 403 46.2
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 1.2e-79 301.2 408 42.2
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 2.6e-79 300.1 402 42.0
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 3.8e-78 296.2 377 45.6
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 5.0e-78 295.8 395 42.8
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 1.2e-76 291.2 399 42.9
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 1.3e-75 287.7 350 46.3
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 2.3e-75 287.0 366 45.1
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 3.3e-74 283.1 389 44.0
Sc11g0006300 Simmondsia chinensis HOM05D007594 ORTHO05D009607 7.4e-74 282.0 382 41.9
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 1.6e-73 280.8 404 43.6
Ciclev10003355m.g Citrus clementina HOM05D007594 ORTHO05D009607 6.3e-73 278.9 324 46.9
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 4.1e-72 276.2 333 48.0
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 4.5e-71 272.7 378 43.1
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 5.0e-70 269.2 339 43.7
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 1.1e-69 268.1 378 42.6
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 5.5e-69 265.8 358 41.3
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 5.5e-69 265.8 378 41.8
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 1.6e-68 264.2 350 44.3
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 3.0e-67 260.0 316 44.0
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 1.3e-65 254.6 314 45.5
Ca_14091_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 2.2e-65 253.8 188 76.6
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 2.8e-65 253.4 386 38.6
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 4.8e-65 252.7 338 40.8
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 8.2e-65 251.9 317 47.0
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 1.1e-64 251.5 380 41.3
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 2.4e-64 250.4 401 38.2
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 3.1e-64 250.0 412 41.0
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 3.1e-64 250.0 412 41.0
Lj9P657T24 Lonicera japonica HOM05D007594 ORTHO05D009607 1.5e-63 247.7 360 41.9
Lalb_Chr24g0402831 Lupinus albus HOM05D007594 ORTHO05D009607 1.5e-63 247.7 231 59.7
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 2.9e-62 243.4 376 38.6
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 3.8e-62 243.0 375 38.7
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 8.5e-62 241.9 372 40.6
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 2.5e-61 240.4 320 40.9
THA.LOC104826746 Tarenaya hassleriana HOM05D007594 ORTHO05D009607 4.2e-61 239.6 334 42.2
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 5.5e-61 239.2 372 38.4
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 5.5e-61 239.2 320 41.6
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 7.2e-61 238.8 416 35.8
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 6.1e-60 235.7 357 40.3
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 1.4e-59 234.6 396 36.9
PGSC0003DMG400006140 Solanum tuberosum HOM05D007594 ORTHO05D009607 3.9e-59 233.0 377 37.7
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 1.5e-58 231.1 303 41.3
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 7.4e-58 228.8 319 40.1
Migut.B01185 Erythranthe guttata HOM05D007594 ORTHO05D009607 2.2e-57 227.3 297 44.1
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 2.2e-57 227.3 428 38.8
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 1.4e-56 224.6 356 39.3
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 1.8e-56 224.2 223 49.8
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 5.3e-56 222.6 310 41.6
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 1.0e-54 218.4 297 42.1
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 6.5e-54 215.7 250 47.2
AUR62002319 Chenopodium quinoa HOM05D007594 ORTHO05D009607 1.5e-53 214.5 373 36.2
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 1.9e-53 214.2 301 41.9
Lalb_Chr24g0402821 Lupinus albus HOM05D007594 ORTHO05D009607 6.7e-51 205.7 146 71.2
Os03g0811200 Oryza sativa ssp. japonica HOM05D007594 ORTHO05D009607 3.7e-49 199.9 340 37.1
Nn032s41616 Nelumbo nucifera HOM05D007594 ORTHO05D009607 3.1e-48 196.8 181 50.3
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 3.1e-48 196.8 375 36.5
Zm00001eb062110 Zea mays HOM05D007594 ORTHO05D009607 5.3e-48 196.1 386 35.8
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 7.0e-48 195.7 269 42.4
Atru.chr12.1243 Acer truncatum HOM05D007594 ORTHO05D009607 1.1e-45 188.3 275 44.7
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 2.0e-42 177.6 402 35.6
unitig_22.g5331 Utricularia gibba HOM05D007594 ORTHO05D009607 3.1e-40 170.2 207 44.9
Hund03164 Selenicereus undatus HOM05D007594 ORTHO05D009607 3.5e-31 140.2 137 43.8
Aqoxy1G00417 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 1.4e-27 128.3 167 41.3
CSS0016538 Camellia sinensis var. sinensis HOM05D007594 ORTHO05D009607 1.1e-21 108.6 109 48.6
Lj2g0024514 Lotus japonicus HOM05D007594 ORTHO05D009607 2.5e-21 107.5 67 76.1
Hund03165 Selenicereus undatus HOM05D007594 ORTHO05D009607 2.1e-20 104.4 221 36.7
Hund03166 Selenicereus undatus HOM05D007594 ORTHO05D009607 4.0e-19 100.1 221 35.7
Atru.chr12.1242 Acer truncatum HOM05D007594 ORTHO05D009607 2.6e-18 97.4 90 53.3
AagrBONN_evm.TU.Sc2ySwM_368.2306 Anthoceros agrestis HOM05D007594 ORTHO05D009607 8.1e-12 75.9 153 28.1
Aqoxy1G00418 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 3.4e-10 70.5 58 53.4
SEGI_38959 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 4.4e-10 70.1 76 36.8
COL.COLO4_04921 Corchorus olitorius HOM05D007594 ORTHO05D009607 6.4e-09 66.2 58 53.4
MELO3C011810.2 Cucumis melo HOM05D007594 ORTHO05D009607 2.4e-08 64.3 183 30.1
CBR_g49793 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-07 61.2 147 27.9
vmacro13770 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 6.6e-06 56.2 54 48.1


User provided reference genes

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