Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20582 Trifolium pratense HOM05D000469 ORTHO05D000323 3.3e-61 238.4 141 100.0
Psat2g069320 Pisum sativum HOM05D000469 ORTHO05D000323 2.9e-25 119.0 155 53.5
Lj1g0027351 Lotus japonicus HOM05D000469 ORTHO05D000323 2.7e-23 112.5 157 49.7
Ca_12563_v3 Cicer arietinum L. HOM05D000469 ORTHO05D000323 1.3e-20 103.6 144 50.0
VMungo1309G0398 Vigna mungo HOM05D000469 ORTHO05D000323 2.8e-20 102.4 157 55.4
Phvul.008G177500 Phaseolus vulgaris HOM05D000469 ORTHO05D000323 3.7e-20 102.1 153 52.3
Medtr5g064950 Medicago truncatula HOM05D000469 ORTHO05D000323 4.8e-20 101.7 146 50.0
Glyma.06G100000 Glycine max HOM05D000469 ORTHO05D000323 8.2e-20 100.9 161 52.2
VMungo0647G1744 Vigna mungo HOM05D000469 ORTHO05D000323 1.8e-19 99.8 154 55.2
Glyma.04G098400 Glycine max HOM05D000469 ORTHO05D000323 5.3e-19 98.2 164 51.8
Lalb_Chr10g0102561 Lupinus albus HOM05D000469 ORTHO05D000323 1.2e-18 97.1 163 50.9
Glyma.14G178000 Glycine max HOM05D000469 ORTHO05D000323 3.4e-18 95.5 156 52.6
Glyma.02G210500 Glycine max HOM05D000469 ORTHO05D000323 4.5e-18 95.1 159 49.7
Lalb_Chr23g0270211 Lupinus albus HOM05D000469 ORTHO05D000323 2.9e-17 92.4 159 56.0
Lalb_Chr23g0270311 Lupinus albus HOM05D000469 ORTHO05D000323 2.9e-17 92.4 159 56.0
Phvul.009G033800 Phaseolus vulgaris HOM05D000469 ORTHO05D000323 1.4e-16 90.1 153 52.3
Lalb_Chr08g0242231 Lupinus albus HOM05D000469 ORTHO05D000323 1.4e-14 83.6 147 51.7
Dinv44814 Davidia involucrata HOM05D000469 ORTHO05D000323 8.8e-14 80.9 145 40.7
TWI12G0455 Tripterygium wilfordii HOM05D000469 ORTHO05D000323 2.0e-13 79.7 159 42.1
Nn1g05475 Nelumbo nucifera HOM05D000469 ORTHO05D000323 2.6e-13 79.3 152 42.8
TAR628G1560 Trochodendron aralioides HOM05D000469 ORTHO05D000323 9.7e-13 77.4 154 40.9
Manes.02G148500 Manihot esculenta HOM05D000469 ORTHO05D000323 1.3e-12 77.0 160 45.6
Nn5g29978 Nelumbo nucifera HOM05D000469 ORTHO05D000323 8.2e-12 74.3 154 42.2
CSS0038310 Camellia sinensis var. sinensis HOM05D000469 ORTHO05D000323 1.8e-11 73.2 147 39.5
CiPaw.16G032200 Carya illinoinensis HOM05D000469 ORTHO05D000323 2.4e-11 72.8 160 44.4
Potri.002G101900 Populus trichocarpa HOM05D000469 ORTHO05D000323 4.1e-11 72.0 157 47.8
GSVIVG01009097001 Vitis vinifera HOM05D000469 ORTHO05D000323 5.3e-11 71.6 150 44.7
Thecc.08G064500 Theobroma cacao HOM05D000469 ORTHO05D000323 7.0e-11 71.2 164 45.7
Haze_04232 Corylus avellana HOM05D000469 ORTHO05D000323 9.1e-11 70.9 146 45.9
Manes.18G063000 Manihot esculenta HOM05D000469 ORTHO05D000323 9.1e-11 70.9 159 45.3
Gohir.D02G084200 Gossypium hirsutum HOM05D000469 ORTHO05D000323 1.2e-10 70.5 158 49.4
Gorai.005G094800 Gossypium raimondii HOM05D000469 ORTHO05D000323 1.2e-10 70.5 158 49.4
Ciclev10001811m.g Citrus clementina HOM05D000469 ORTHO05D000323 2.0e-10 69.7 157 49.0
CiPaw.15G044700 Carya illinoinensis HOM05D000469 ORTHO05D000323 2.6e-10 69.3 151 41.1
QL02p002208 Quercus lobata HOM05D000469 ORTHO05D000323 2.6e-10 69.3 165 44.2
Sabra02G0079900 Salix brachista HOM05D000469 ORTHO05D000323 4.5e-10 68.6 154 41.6
Hma1.2p1_0961F.1_g241640 Hydrangea macrophylla HOM05D000469 ORTHO05D000323 5.9e-10 68.2 144 36.1
Dinv42664 Davidia involucrata HOM05D000469 ORTHO05D000323 7.7e-10 67.8 150 46.7
TAR376G0452 Trochodendron aralioides HOM05D000469 ORTHO05D000323 1.0e-09 67.4 153 35.3
COL.COLO4_11989 Corchorus olitorius HOM05D000469 ORTHO05D000323 1.3e-09 67.0 176 42.6
Cfa006550 Carpinus fangiana HOM05D000469 ORTHO05D000323 1.7e-09 66.6 146 37.7
Gohir.A02G077000 Gossypium hirsutum HOM05D000469 ORTHO05D000323 1.7e-09 66.6 158 48.7
Haze_18248 Corylus avellana HOM05D000469 ORTHO05D000323 2.9e-09 65.9 154 44.8
Psat5g050120 Pisum sativum HOM05D000469 ORTHO05D000323 6.5e-09 64.7 156 42.3
Dinv32065 Davidia involucrata HOM05D000469 ORTHO05D000323 1.1e-08 63.9 145 34.5
FAN13G0981 Fragaria x ananassa HOM05D000469 ORTHO05D000323 1.1e-08 63.9 157 47.1
CSS0007204 Camellia sinensis var. sinensis HOM05D000469 ORTHO05D000323 1.5e-08 63.5 154 34.4
CSS0031609 Camellia sinensis var. sinensis HOM05D000469 ORTHO05D000323 1.5e-08 63.5 154 34.4
Phvul.007G181900 Phaseolus vulgaris HOM05D000469 ORTHO05D000323 1.5e-08 63.5 153 37.9
Actinidia10353 Actinidia chinensis HOM05D000469 ORTHO05D000323 1.9e-08 63.2 141 48.2
Dinv23972 Davidia involucrata HOM05D000469 ORTHO05D000323 1.9e-08 63.2 155 37.4
Cfa017904 Carpinus fangiana HOM05D000469 ORTHO05D000323 2.5e-08 62.8 151 43.0
CiPaw.07G014900 Carya illinoinensis HOM05D000469 ORTHO05D000323 2.5e-08 62.8 155 34.8
Lj4C94T4 Lonicera japonica HOM05D000469 ORTHO05D000323 2.5e-08 62.8 148 39.2
Medtr3g099620 Medicago truncatula HOM05D000469 ORTHO05D000323 2.5e-08 62.8 141 36.2
VMungo0540G2081 Vigna mungo HOM05D000469 ORTHO05D000323 2.5e-08 62.8 146 37.7
GSVIVG01000012001 Vitis vinifera HOM05D000469 ORTHO05D000323 5.5e-08 61.6 161 47.2
Duzib147G0976 Durio zibethinus HOM05D000469 ORTHO05D000323 7.2e-08 61.2 156 39.7
QL06p047917 Quercus lobata HOM05D000469 ORTHO05D000323 7.2e-08 61.2 156 41.0
arahy.Tifrunner.gnm1.ann1.AEJR4S Arachis hypogaea HOM05D000469 ORTHO05D000323 9.4e-08 60.8 160 40.0
CDE06G1308 Ceratophyllum demersum HOM05D000469 ORTHO05D000323 9.4e-08 60.8 153 37.3
Cc10_g06580 Coffea canephora HOM05D000469 ORTHO05D000323 9.4e-08 60.8 116 34.5
Dinv40260 Davidia involucrata HOM05D000469 ORTHO05D000323 9.4e-08 60.8 152 38.8
MD15G1377800 Malus domestica HOM05D000469 ORTHO05D000323 1.2e-07 60.5 156 45.5
RcHm_v2.0_Chr7g0238141 Rosa chinensis HOM05D000469 ORTHO05D000323 1.2e-07 60.5 159 47.8
Gohir.D05G225500 Gossypium hirsutum HOM05D000469 ORTHO05D000323 1.6e-07 60.1 163 45.4
Gorai.009G233000 Gossypium raimondii HOM05D000469 ORTHO05D000323 1.6e-07 60.1 163 45.4
CsaV3_2G005070 Cucumis sativus L. HOM05D000469 ORTHO05D000323 2.7e-07 59.3 146 39.7
Duzib093G1001 Durio zibethinus HOM05D000469 ORTHO05D000323 2.7e-07 59.3 168 41.1
FvH4_5g36240 Fragaria vesca HOM05D000469 ORTHO05D000323 2.7e-07 59.3 157 46.5
FAN08G1343 Fragaria x ananassa HOM05D000469 ORTHO05D000323 2.7e-07 59.3 157 46.5
FAN18G3673 Fragaria x ananassa HOM05D000469 ORTHO05D000323 2.7e-07 59.3 157 46.5
VMungo0720G1889 Vigna mungo HOM05D000469 ORTHO05D000323 3.6e-07 58.9 146 35.6
CSS0005269 Camellia sinensis var. sinensis HOM05D000469 ORTHO05D000323 4.7e-07 58.5 150 34.0
Duzib177G0940 Durio zibethinus HOM05D000469 ORTHO05D000323 4.7e-07 58.5 157 38.9
MD08G1190500 Malus domestica HOM05D000469 ORTHO05D000323 4.7e-07 58.5 160 44.4
Phvul.006G093900 Phaseolus vulgaris HOM05D000469 ORTHO05D000323 4.7e-07 58.5 147 34.0
Actinidia30799 Actinidia chinensis HOM05D000469 ORTHO05D000323 6.1e-07 58.2 103 53.4
A07p30290 Brassica napus HOM05D000469 ORTHO05D000323 6.1e-07 58.2 149 36.9
Dinv13636 Davidia involucrata HOM05D000469 ORTHO05D000323 6.1e-07 58.2 146 33.6
Thecc.01G094800 Theobroma cacao HOM05D000469 ORTHO05D000323 6.1e-07 58.2 154 39.0
BcaNung07232 Brassica carinata HOM05D000469 ORTHO05D000323 8.0e-07 57.8 156 34.6
BraA07t30666Z Brassica rapa HOM05D000469 ORTHO05D000323 8.0e-07 57.8 149 36.9
CiPaw.08G166500 Carya illinoinensis HOM05D000469 ORTHO05D000323 8.0e-07 57.8 152 36.2
ClCG08G011360 Citrullus lanatus HOM05D000469 ORTHO05D000323 8.0e-07 57.8 154 45.5
MD04G1208700 Malus domestica HOM05D000469 ORTHO05D000323 8.0e-07 57.8 157 39.5
Nitab4.5_0004271g0060 Nicotiana tabacum HOM05D000469 ORTHO05D000323 8.0e-07 57.8 162 41.4
Prupe.1G524500 Prunus persica HOM05D000469 ORTHO05D000323 8.0e-07 57.8 166 47.0
Peaxi162Scf00037g00014 Petunia axillaris HOM05D000469 ORTHO05D000323 1.0e-06 57.4 158 38.0
C06p35040 Brassica napus HOM05D000469 ORTHO05D000323 1.4e-06 57.0 149 36.9
BolC6t38603H Brassica oleracea HOM05D000469 ORTHO05D000323 1.4e-06 57.0 149 36.9
CDE03G0246 Ceratophyllum demersum HOM05D000469 ORTHO05D000323 1.4e-06 57.0 153 35.3
MELO3C004287.2 Cucumis melo HOM05D000469 ORTHO05D000323 1.4e-06 57.0 146 39.0
Cpa.g.sc36.191 Carica papaya HOM05D000469 ORTHO05D000323 1.8e-06 56.6 145 40.7
Psat0s2054g0040 Pisum sativum HOM05D000469 ORTHO05D000323 2.3e-06 56.2 116 41.4
QL03p004523 Quercus lobata HOM05D000469 ORTHO05D000323 2.3e-06 56.2 157 36.3
Glyma.19G236900 Glycine max HOM05D000469 ORTHO05D000323 3.0e-06 55.8 148 38.5
arahy.Tifrunner.gnm1.ann1.UDFT26 Arachis hypogaea HOM05D000469 ORTHO05D000323 4.0e-06 55.5 160 43.8
BcaB03g14964 Brassica carinata HOM05D000469 ORTHO05D000323 4.0e-06 55.5 150 40.7
ClCG02G015980 Citrullus lanatus HOM05D000469 ORTHO05D000323 4.0e-06 55.5 148 37.2
COL.COLO4_13510 Corchorus olitorius HOM05D000469 ORTHO05D000323 4.0e-06 55.5 161 35.4
Rhsim06G0076800 Rhododendron simsii HOM05D000469 ORTHO05D000323 4.0e-06 55.5 105 41.0
Nitab4.5_0012767g0010 Nicotiana tabacum HOM05D000469 ORTHO05D000323 5.2e-06 55.1 164 31.1
PGSC0003DMG400002125 Solanum tuberosum HOM05D000469 ORTHO05D000323 5.2e-06 55.1 165 30.3
BcaB07g32259 Brassica carinata HOM05D000469 ORTHO05D000323 6.7e-06 54.7 27 100.0
BcaC05g26175 Brassica carinata HOM05D000469 ORTHO05D000323 6.7e-06 54.7 27 100.0
BcaC08g45718 Brassica carinata HOM05D000469 ORTHO05D000323 6.7e-06 54.7 149 36.2
C05p21590 Brassica napus HOM05D000469 ORTHO05D000323 6.7e-06 54.7 27 100.0
BolC5t30854H Brassica oleracea HOM05D000469 ORTHO05D000323 6.7e-06 54.7 27 100.0
Carub.0002s1902 Capsella rubella HOM05D000469 ORTHO05D000323 6.7e-06 54.7 152 44.7
MELO3C015341.2 Cucumis melo HOM05D000469 ORTHO05D000323 6.7e-06 54.7 142 39.4
MBI06_g03312_MAGBIO Magnolia biondii HOM05D000469 ORTHO05D000323 6.7e-06 54.7 92 45.7
CSS0012583 Camellia sinensis var. sinensis HOM05D000469 ORTHO05D000323 8.8e-06 54.3 157 36.3
Os08g0483900 Oryza sativa ssp. japonica HOM05D000469 ORTHO05D000323 8.8e-06 54.3 27 96.3
Os09g0468700 Oryza sativa ssp. japonica HOM05D000469 ORTHO05D000323 8.8e-06 54.3 27 96.3
Peaxi162Scf00237g00101 Petunia axillaris HOM05D000469 ORTHO05D000323 8.8e-06 54.3 149 36.2
Sopen00g009860 Solanum pennellii HOM05D000469 ORTHO05D000323 8.8e-06 54.3 158 36.7
vmacro21929 Vaccinium macrocarpon HOM05D000469 ORTHO05D000323 8.8e-06 54.3 112 39.3


User provided reference genes

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