Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20537 Trifolium pratense HOM05D002924 ORTHO05D003122 2.8e-21 104.4 54 100.0
Psat7g082920 Pisum sativum HOM05D002924 ORTHO05D003122 1.2e-11 72.4 55 74.5
Glyma.13G219100 Glycine max HOM05D002924 ORTHO05D003122 9.5e-09 62.8 52 69.2
Glyma.15G093100 Glycine max HOM05D002924 ORTHO05D003122 9.5e-09 62.8 51 68.6
Glyma.08G096500 Glycine max HOM05D002924 ORTHO05D003122 2.8e-08 61.2 52 67.3
Glyma.05G141200 Glycine max HOM05D002924 ORTHO05D003122 4.7e-08 60.5 53 64.2
Thecc.06G148600 Theobroma cacao HOM05D002924 ORTHO05D003122 3.1e-07 57.8 49 63.3
VMungo0540G0736 Vigna mungo HOM05D002924 ORTHO05D003122 3.1e-07 57.8 50 64.0
arahy.Tifrunner.gnm1.ann1.EU8XRE Arachis hypogaea HOM05D002924 ORTHO05D003122 4.0e-07 57.4 60 55.0
Duzib235G1474 Durio zibethinus HOM05D002924 ORTHO05D003122 6.8e-07 56.6 47 66.0
arahy.Tifrunner.gnm1.ann1.IG3UT7 Arachis hypogaea HOM05D002924 ORTHO05D003122 8.9e-07 56.2 61 54.1
Lalb_Chr18g0055361 Lupinus albus HOM05D002924 ORTHO05D003122 2.0e-06 55.1 50 64.0
Lj6g0009882 Lotus japonicus HOM05D002924 ORTHO05D003122 2.6e-06 54.7 53 56.6
Phvul.006G165800 Phaseolus vulgaris HOM05D002924 ORTHO05D003122 4.4e-06 53.9 36 75.0
Cc00_g01970 Coffea canephora HOM05D002924 ORTHO05D003122 5.8e-06 53.5 45 66.7
Duzib160G0328 Durio zibethinus HOM05D002924 ORTHO05D003122 5.8e-06 53.5 48 66.7
Lalb_Chr15g0086781 Lupinus albus HOM05D002924 ORTHO05D003122 9.8e-06 52.8 50 62.0
Medtr2g019190 Medicago truncatula HOM05D002924 ORTHO05D003122 9.8e-06 52.8 53 60.4
Nitab4.5_0001531g0050 Nicotiana tabacum HOM05D002924 ORTHO05D003122 9.8e-06 52.8 42 71.4


User provided reference genes

Program Settings