Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20421 Trifolium pratense HOM05D000147 ORTHO05D410948 5.8e-13 76.3 38 100.0
Psat5g074360 Pisum sativum HOM05D000147 ORTHO05D003093 5.1e-09 63.2 38 81.6
TPR.G33641 Trifolium pratense HOM05D000147 ORTHO05D003093 1.1e-08 62.0 50 68.0
Medtr3g092070 Medicago truncatula HOM05D000147 ORTHO05D003093 3.3e-08 60.5 38 76.3
TPR.G33632 Trifolium pratense HOM05D000147 ORTHO05D003093 9.6e-08 58.9 40 82.5
Ca_16744_v3 Cicer arietinum L. HOM05D000147 ORTHO05D003093 1.6e-07 58.2 38 76.3
Phvul.009G048700 Phaseolus vulgaris HOM05D000147 ORTHO05D003093 4.8e-07 56.6 38 73.7
Lalb_Chr11g0067141 Lupinus albus HOM05D000147 ORTHO05D003093 8.2e-07 55.8 38 71.1
Nitab4.5_0008259g0020 Nicotiana tabacum HOM05D000147 ORTHO05D003093 8.2e-07 55.8 38 68.4
Potri.015G007700 Populus trichocarpa HOM05D000147 ORTHO05D003093 8.2e-07 55.8 38 68.4
Aqoxy7G00027 Aquilegia oxysepala HOM05D000147 ORTHO05D003093 1.1e-06 55.5 38 68.4
Ca_16743_v3 Cicer arietinum L. HOM05D000147 ORTHO05D003093 1.1e-06 55.5 36 80.6
Glyma.04G232100 Glycine max HOM05D000147 ORTHO05D003093 1.1e-06 55.5 38 71.1
Glyma.06G132800 Glycine max HOM05D000147 ORTHO05D003093 1.1e-06 55.5 38 71.1
CAN.G481.64 Capsicum annuum HOM05D000147 ORTHO05D003093 1.4e-06 55.1 38 68.4
MELO3C005896.2 Cucumis melo HOM05D000147 ORTHO05D003093 1.4e-06 55.1 38 71.1
CsaV3_5G000370 Cucumis sativus L. HOM05D000147 ORTHO05D003093 1.4e-06 55.1 38 71.1
Gorai.004G122900 Gossypium raimondii HOM05D000147 ORTHO05D003093 1.4e-06 55.1 38 73.7
Dinv29238 Davidia involucrata HOM05D000147 ORTHO05D003093 1.8e-06 54.7 38 71.1
Phvul.001G075200 Phaseolus vulgaris HOM05D000147 ORTHO05D003093 1.8e-06 54.7 38 71.1
Lalb_Chr08g0239961 Lupinus albus HOM05D000147 ORTHO05D003093 2.4e-06 54.3 38 71.1
Thecc.03G205100 Theobroma cacao HOM05D000147 ORTHO05D003093 2.4e-06 54.3 38 73.7
Glyma.14G117800 Glycine max HOM05D000147 ORTHO05D003093 3.1e-06 53.9 38 71.1
Gohir.D08G114100 Gossypium hirsutum HOM05D000147 ORTHO05D003093 3.1e-06 53.9 38 71.1
GSVIVG01038610001 Vitis vinifera HOM05D000147 ORTHO05D003093 3.1e-06 53.9 38 71.1
Duzib205G0797 Durio zibethinus HOM05D000147 ORTHO05D003093 4.0e-06 53.5 38 71.1
Gohir.A08G101700 Gossypium hirsutum HOM05D000147 ORTHO05D003093 4.0e-06 53.5 38 71.1
VMungo0647G0381 Vigna mungo HOM05D000147 ORTHO05D003093 4.0e-06 53.5 38 68.4
Gohir.A09G186100 Gossypium hirsutum HOM05D000147 ORTHO05D003093 5.3e-06 53.1 38 65.8
Gohir.D09G181100 Gossypium hirsutum HOM05D000147 ORTHO05D003093 5.3e-06 53.1 38 65.8
Gorai.006G203100 Gossypium raimondii HOM05D000147 ORTHO05D003093 5.3e-06 53.1 38 65.8
Rhsim09G0208100 Rhododendron simsii HOM05D000147 ORTHO05D003093 5.3e-06 53.1 38 68.4
vmacro10146 Vaccinium macrocarpon HOM05D000147 ORTHO05D003093 5.3e-06 53.1 38 68.4
VMungo1309G2160 Vigna mungo HOM05D000147 ORTHO05D003093 5.3e-06 53.1 38 68.4
Medtr3g092080 Medicago truncatula HOM05D000147 ORTHO05D003093 6.9e-06 52.8 38 73.7
PGSC0003DMG400005469 Solanum tuberosum HOM05D000147 ORTHO05D003093 6.9e-06 52.8 38 65.8
Atru.chr12.2326 Acer truncatum HOM05D000147 ORTHO05D003093 9.0e-06 52.4 38 65.8
COL.COLO4_16828 Corchorus olitorius HOM05D000147 ORTHO05D003093 9.0e-06 52.4 38 65.8
Solyc06g053160.3 Solanum lycopersicum HOM05D000147 ORTHO05D003093 9.0e-06 52.4 38 63.2


User provided reference genes

Program Settings