Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20410 Trifolium pratense HOM05D003739 ORTHO05D003996 1.3e-101 373.2 217 100.0
TPR.G2246 Trifolium pratense HOM05D003739 ORTHO05D003996 3.2e-87 325.5 215 88.8
Ca_17694_v3 Cicer arietinum L. HOM05D003739 ORTHO05D003996 2.2e-56 223.0 219 62.6
Glyma.11G010900 Glycine max HOM05D003739 ORTHO05D003996 1.7e-48 196.8 240 55.4
Glyma.01G228200 Glycine max HOM05D003739 ORTHO05D003996 3.9e-45 185.7 240 53.8
Psat7g051160 Pisum sativum HOM05D003739 ORTHO05D003996 8.7e-45 184.5 240 54.6
Medtr8g091850 Medicago truncatula HOM05D003739 ORTHO05D003996 1.4e-42 177.2 196 57.1
Medtr8g091830 Medicago truncatula HOM05D003739 ORTHO05D003996 5.3e-42 175.3 223 59.2
Psat7g051640 Pisum sativum HOM05D003739 ORTHO05D003996 2.0e-41 173.3 217 59.4
Lalb_Chr11g0068001 Lupinus albus HOM05D003739 ORTHO05D003996 1.0e-37 161.0 225 55.1
arahy.Tifrunner.gnm1.ann1.H3NIN5 Arachis hypogaea HOM05D003739 ORTHO05D003996 5.1e-37 158.7 218 53.7
arahy.Tifrunner.gnm1.ann1.TF9NF6 Arachis hypogaea HOM05D003739 ORTHO05D003996 9.0e-34 147.9 228 50.9
LjContig00222g0016564 Lotus japonicus HOM05D003739 ORTHO05D003996 1.1e-31 141.0 211 53.1
Lj6g0022884 Lotus japonicus HOM05D003739 ORTHO05D003996 3.2e-31 139.4 206 53.9
Phvul.002G039700 Phaseolus vulgaris HOM05D003739 ORTHO05D003996 2.1e-30 136.7 218 55.0
VMungo1215G1752 Vigna mungo HOM05D003739 ORTHO05D003996 9.7e-20 101.3 89 64.0
QL11p044151 Quercus lobata HOM05D003739 ORTHO05D003996 1.3e-19 100.9 209 38.8
Oeu005537.3 Olea europaea HOM05D003739 ORTHO05D003996 5.1e-13 79.0 109 50.5
CiPaw.10G121500 Carya illinoinensis HOM05D003739 ORTHO05D003996 8.8e-13 78.2 215 35.8
TWI79G1707 Tripterygium wilfordii HOM05D003739 ORTHO05D003996 8.8e-13 78.2 114 46.5
EL10Ac3g05170 Beta vulgaris HOM05D003739 ORTHO05D003996 1.5e-12 77.4 104 50.0
CANSAT11G0250 Cannabis sativa HOM05D003739 ORTHO05D003996 3.3e-12 76.3 133 38.3
Atru.chr12.1298 Acer truncatum HOM05D003739 ORTHO05D003996 4.4e-12 75.9 92 45.7
CAN.G809.70 Capsicum annuum HOM05D003739 ORTHO05D003996 5.7e-12 75.5 202 34.7
CiPaw.06G133400 Carya illinoinensis HOM05D003739 ORTHO05D003996 5.7e-12 75.5 243 37.0
AUR62028080 Chenopodium quinoa HOM05D003739 ORTHO05D003996 7.4e-12 75.1 73 54.8
Eucgr.A01623 Eucalyptus grandis HOM05D003739 ORTHO05D003996 7.4e-12 75.1 101 44.6
Cfa005045 Carpinus fangiana HOM05D003739 ORTHO05D003996 9.7e-12 74.7 211 33.2
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 1.7e-11 73.9 217 33.2
CSS0038123 Camellia sinensis var. sinensis HOM05D003739 ORTHO05D003996 3.7e-11 72.8 213 33.8
Dinv05658 Davidia involucrata HOM05D003739 ORTHO05D003996 3.7e-11 72.8 193 34.7
PGR042G2822 Punica granatum HOM05D003739 ORTHO05D003996 3.7e-11 72.8 172 34.3
Atru.chr5.3065 Acer truncatum HOM05D003739 ORTHO05D003996 1.1e-10 71.2 93 45.2
Ciclev10027900m.g Citrus clementina HOM05D003739 ORTHO05D003996 1.1e-10 71.2 220 34.1
MSTRG.9105 Avicennia marina HOM05D003739 ORTHO05D003996 1.8e-10 70.5 96 46.9
GSVIVG01023816001 Vitis vinifera HOM05D003739 ORTHO05D003996 2.4e-10 70.1 219 32.4
Duzib187G1144 Durio zibethinus HOM05D003739 ORTHO05D003996 3.1e-10 69.7 106 42.5
Potri.010G019600 Populus trichocarpa HOM05D003739 ORTHO05D003996 6.9e-10 68.6 210 34.3
Sabra10G0016300 Salix brachista HOM05D003739 ORTHO05D003996 6.9e-10 68.6 212 32.5
Aqoxy2G03991 Aquilegia oxysepala HOM05D003739 ORTHO05D003996 1.2e-09 67.8 187 32.6
Cc09_g05210 Coffea canephora HOM05D003739 ORTHO05D003996 1.2e-09 67.8 173 36.4
Glyma.10G205167 Glycine max HOM05D003739 ORTHO05D003996 1.2e-09 67.8 78 57.7
Hund09717 Selenicereus undatus HOM05D003739 ORTHO05D003996 1.2e-09 67.8 111 41.4
Actinidia35828 Actinidia chinensis HOM05D003739 ORTHO05D003996 1.5e-09 67.4 83 49.4
RcHm_v2.0_Chr5g0054461 Rosa chinensis HOM05D003739 ORTHO05D003996 1.0e-08 64.7 203 29.6
CANSAT54G2857 Cannabis sativa HOM05D003739 ORTHO05D003996 2.2e-08 63.5 216 30.6
TPR.G2191 Trifolium pratense HOM05D003739 ORTHO05D003996 2.2e-08 63.5 30 100.0
Actinidia20856 Actinidia chinensis HOM05D003739 ORTHO05D003996 3.8e-08 62.8 79 48.1
FAN15G1163 Fragaria x ananassa HOM05D003739 ORTHO05D003996 5.0e-08 62.4 207 30.0
AUR62005990 Chenopodium quinoa HOM05D003739 ORTHO05D003996 8.5e-08 61.6 52 61.5
MD10G1070200 Malus domestica HOM05D003739 ORTHO05D003996 8.5e-08 61.6 213 32.4
RcHm_v2.0_Chr6g0265811 Rosa chinensis HOM05D003739 ORTHO05D003996 1.1e-07 61.2 220 31.8
Prupe.8G091800 Prunus persica HOM05D003739 ORTHO05D003996 1.9e-07 60.5 210 32.9
FAN27G2905 Fragaria x ananassa HOM05D003739 ORTHO05D003996 4.2e-07 59.3 222 28.8
PSO339G5323 Papaver somniferum HOM05D003739 ORTHO05D003996 5.5e-07 58.9 204 30.9
Lsat_1_v5_gn_5_112881 Lactuca sativa HOM05D003739 ORTHO05D003996 9.4e-07 58.2 227 32.6
Glyma.16G175800 Glycine max HOM05D000486 ORTHO05D000375 1.2e-06 57.8 64 54.7
Lj8C306T17 Lonicera japonica HOM05D003739 ORTHO05D003996 1.6e-06 57.4 180 33.3
Sed0009728 Sechium edule HOM05D003739 ORTHO05D003996 2.7e-06 56.6 113 38.9
Thecc.08G060300 Theobroma cacao HOM05D003739 ORTHO05D003996 2.7e-06 56.6 223 32.7
unitig_46.g18632 Utricularia gibba HOM05D003739 ORTHO05D003996 2.7e-06 56.6 186 33.9
ClCG01G008230 Citrullus lanatus HOM05D003739 ORTHO05D003996 3.6e-06 56.2 218 32.1
Medtr4g067250 Medicago truncatula HOM05D003739 ORTHO05D003996 3.6e-06 56.2 164 45.1
Migut.F00900 Erythranthe guttata HOM05D003739 ORTHO05D003996 6.1e-06 55.5 152 35.5
PSO063G1830 Papaver somniferum HOM05D003739 ORTHO05D003996 6.1e-06 55.5 208 31.7
SGA_v2.0_scaffold62G21539 Striga asiatica HOM05D003739 ORTHO05D003996 6.1e-06 55.5 85 43.5
ECA234G4722 Erigeron canadensis HOM05D003739 ORTHO05D003996 7.9e-06 55.1 134 32.8


User provided reference genes

Program Settings