Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20407 Trifolium pratense HOM05D013784 ORTHO05D000110 2.4e-101 372.1 178 100.0
TPR.G27572 Trifolium pratense HOM05D013784 ORTHO05D000110 1.9e-61 239.6 142 76.8
Psat2g112240 Pisum sativum HOM05D013784 ORTHO05D000110 2.7e-60 235.7 142 75.4
Lj3g0001529 Lotus japonicus HOM05D013784 ORTHO05D000110 6.4e-54 214.5 141 70.2
Medtr1325s0010 Medicago truncatula HOM05D013784 ORTHO05D000110 6.7e-43 177.9 88 89.8
Glyma.11G140300 Glycine max HOM05D013784 ORTHO05D000110 7.9e-20 101.3 86 51.2
Oeu064174.1 Olea europaea HOM05D027131 ORTHO05D013900 6.3e-17 91.7 127 37.0
Lsat_1_v5_gn_3_2021 Lactuca sativa HOM05D008959 ORTHO05D000110 2.2e-14 83.2 151 31.1
Lsat_1_v5_gn_7_64800 Lactuca sativa HOM05D008959 ORTHO05D000110 2.2e-14 83.2 151 31.1
Lsat_1_v5_gn_7_44701 Lactuca sativa HOM05D008959 ORTHO05D000110 6.5e-14 81.6 151 31.1
Manes.12G049491 Manihot esculenta HOM05D009368 ORTHO05D000110 6.5e-14 81.6 134 33.6
Lsat_1_v5_gn_3_5821 Lactuca sativa HOM05D008959 ORTHO05D000110 8.5e-14 81.3 151 31.1
Lsat_1_v5_gn_6_25761 Lactuca sativa HOM05D008959 ORTHO05D000110 8.5e-14 81.3 151 31.1
Lsat_1_v5_gn_6_44661 Lactuca sativa HOM05D008959 ORTHO05D000110 8.5e-14 81.3 151 31.1
Manes.12G096601 Manihot esculenta HOM05D009368 ORTHO05D000110 3.2e-13 79.3 121 33.1
Lsat_1_v5_gn_7_24620 Lactuca sativa HOM05D008959 ORTHO05D000110 4.2e-13 79.0 183 27.3
Lsat_1_v5_gn_7_39260 Lactuca sativa HOM05D008959 ORTHO05D000110 4.2e-13 79.0 151 30.5
Manes.08G043150 Manihot esculenta HOM05D009368 ORTHO05D000110 7.2e-13 78.2 121 33.1
Sc11g0006580 Simmondsia chinensis HOM05D000420 ORTHO05D000110 1.2e-12 77.4 157 31.8
Manes.06G045650 Manihot esculenta HOM05D009368 ORTHO05D000110 3.6e-12 75.9 101 36.6
Manes.03G071216 Manihot esculenta HOM05D009368 ORTHO05D000110 6.1e-12 75.1 103 36.9
Lsat_1_v5_gn_6_58100 Lactuca sativa HOM05D008959 ORTHO05D000110 8.0e-12 74.7 138 29.7
Manes.17G120650 Manihot esculenta HOM05D009368 ORTHO05D000110 3.0e-11 72.8 101 35.6
Manes.05G086382 Manihot esculenta HOM05D009368 ORTHO05D000110 3.9e-11 72.4 144 28.5
Manes.11G103350 Manihot esculenta HOM05D009368 ORTHO05D000110 3.9e-11 72.4 101 35.6
COL.COLO4_32130 Corchorus olitorius HOM05D020549 ORTHO05D000110 2.0e-10 70.1 113 34.5
Lsat_1_v5_gn_7_98181 Lactuca sativa HOM05D008959 ORTHO05D000110 2.6e-10 69.7 135 29.6
Lsat_1_v5_gn_4_47461 Lactuca sativa HOM05D008959 ORTHO05D000110 3.3e-10 69.3 142 28.9
Lj6g0010933 Lotus japonicus HOM05D000420 ORTHO05D000110 3.3e-10 69.3 141 27.7
Potri.007G036901 Populus trichocarpa HOM05D008959 ORTHO05D000110 9.7e-10 67.8 119 28.6
TPR.G25746 Trifolium pratense HOM05D000107 ORTHO05D000062 9.7e-10 67.8 34 100.0
Ca_02480_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 2.8e-09 66.2 87 37.9
arahy.Tifrunner.gnm1.ann1.EC6H77 Arachis hypogaea HOM05D008137 ORTHO05D010271 3.7e-09 65.9 118 34.7
Sc17g0002770 Simmondsia chinensis HOM05D013143 ORTHO05D000110 3.7e-09 65.9 113 31.9
arahy.Tifrunner.gnm1.ann1.A82PFR Arachis hypogaea HOM05D008137 ORTHO05D010271 4.8e-09 65.5 114 35.1
Ca_14247_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 6.3e-09 65.1 87 37.9
Atru.chr2.2657 Acer truncatum HOM05D009200 ORTHO05D010964 8.2e-09 64.7 137 27.0
arahy.Tifrunner.gnm1.ann1.LHGE4J Arachis hypogaea HOM05D008137 ORTHO05D010271 8.2e-09 64.7 94 38.3
COL.COLO4_29043 Corchorus olitorius HOM05D005763 ORTHO05D005970 8.2e-09 64.7 140 28.6
Lj2g0022906 Lotus japonicus HOM05D013784 ORTHO05D000110 8.2e-09 64.7 39 64.1
arahy.Tifrunner.gnm1.ann1.Z1NU4Y Arachis hypogaea HOM05D008137 ORTHO05D010271 1.1e-08 64.3 101 36.6
Atru.chr11.620 Acer truncatum HOM05D009200 ORTHO05D010964 1.4e-08 63.9 137 27.0
VMungo1215G2822 Vigna mungo HOM05D000420 ORTHO05D000110 1.4e-08 63.9 91 34.1
Ca_07252_v3 Cicer arietinum L. HOM05D000420 ORTHO05D000110 2.4e-08 63.2 87 36.8
Peaxi162Scf00745g00059 Petunia axillaris HOM05D016080 ORTHO05D015731 3.1e-08 62.8 85 40.0
Ca_04550_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 5.3e-08 62.0 84 38.1
ECA246G0395 Erigeron canadensis HOM05D008959 ORTHO05D000110 5.3e-08 62.0 138 29.7
Manes.08G086022 Manihot esculenta HOM05D009368 ORTHO05D000110 7.0e-08 61.6 76 38.2
Sc13g0007030 Simmondsia chinensis HOM05D013143 ORTHO05D000110 7.0e-08 61.6 94 37.2
Phvul.011G136915 Phaseolus vulgaris HOM05D000420 ORTHO05D000110 9.1e-08 61.2 110 32.7
Hund07379 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.6e-07 60.5 128 28.9
arahy.Tifrunner.gnm1.ann1.Q0WVMV Arachis hypogaea HOM05D008137 ORTHO05D010271 2.6e-07 59.7 94 36.2
Ca_02618_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 2.6e-07 59.7 110 33.6
FAN24G2747 Fragaria x ananassa HOM05D009200 ORTHO05D010964 3.5e-07 59.3 143 28.0
Hund07610 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.5e-07 59.3 133 29.3
Hund11421 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.5e-07 59.3 129 28.7
TWI53G0463 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 3.5e-07 59.3 88 40.9
TWI79G0823 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 3.5e-07 59.3 168 28.6
Lsat_1_v5_gn_3_96041 Lactuca sativa HOM05D008959 ORTHO05D000110 4.5e-07 58.9 113 32.7
Manes.09G086083 Manihot esculenta HOM05D009368 ORTHO05D000110 4.5e-07 58.9 110 30.0
Hund17457 Selenicereus undatus HOM05D000420 ORTHO05D000110 4.5e-07 58.9 128 28.1
TPR.G26461 Trifolium pratense HOM05D000420 ORTHO05D000110 4.5e-07 58.9 81 39.5
TPR.G38788 Trifolium pratense HOM05D008137 ORTHO05D000110 4.5e-07 58.9 90 33.3
Hund09997 Selenicereus undatus HOM05D000420 ORTHO05D000110 5.9e-07 58.5 143 24.5
Hund20320 Selenicereus undatus HOM05D000420 ORTHO05D000110 5.9e-07 58.5 133 28.6
TWI74G1170 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 5.9e-07 58.5 102 29.4
FAN14G0856 Fragaria x ananassa HOM05D009200 ORTHO05D010964 7.7e-07 58.2 92 31.5
Hund00752 Selenicereus undatus HOM05D000420 ORTHO05D000110 7.7e-07 58.2 128 28.9
Hund00845 Selenicereus undatus HOM05D000420 ORTHO05D000110 7.7e-07 58.2 133 29.3
Hund03949 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.0e-06 57.8 128 28.1
Hund21389 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.0e-06 57.8 128 28.9
Hund02042 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.3e-06 57.4 128 28.1
Hund13261 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.3e-06 57.4 126 27.8
VMungo1309G0157 Vigna mungo HOM05D000107 ORTHO05D000062 1.3e-06 57.4 100 32.0
Ca_19138_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 1.7e-06 57.0 93 34.4
COL.COLO4_38106 Corchorus olitorius HOM05D020549 ORTHO05D000110 1.7e-06 57.0 82 36.6
Hund23072 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.7e-06 57.0 128 28.1
Hund24617 Selenicereus undatus HOM05D000420 ORTHO05D000110 1.7e-06 57.0 128 28.1
TPR.G17157 Trifolium pratense HOM05D021196 ORTHO05D019304 1.7e-06 57.0 88 35.2
TWI36G1173 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 1.7e-06 57.0 79 43.0
TWI73G1084 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 1.7e-06 57.0 68 41.2
Ca_02862_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 2.2e-06 56.6 98 33.7
FAN13G0762 Fragaria x ananassa HOM05D009200 ORTHO05D010964 2.2e-06 56.6 143 28.0
Hund00959 Selenicereus undatus HOM05D000420 ORTHO05D000110 2.2e-06 56.6 132 28.0
Hund07786 Selenicereus undatus HOM05D000420 ORTHO05D000110 2.2e-06 56.6 88 36.4
Hund11921 Selenicereus undatus HOM05D000420 ORTHO05D000110 2.2e-06 56.6 128 28.1
Hund13512 Selenicereus undatus HOM05D000420 ORTHO05D000110 2.2e-06 56.6 128 28.1
Hund17617 Selenicereus undatus HOM05D000420 ORTHO05D000110 2.2e-06 56.6 128 28.1
Ca_02619_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 2.9e-06 56.2 59 42.4
Hund04474 Selenicereus undatus HOM05D000420 ORTHO05D000110 2.9e-06 56.2 128 28.1
Hund14829 Selenicereus undatus HOM05D000420 ORTHO05D000110 2.9e-06 56.2 128 28.1
Hund15073 Selenicereus undatus HOM05D000420 ORTHO05D000110 2.9e-06 56.2 128 28.1
Hund28415 Selenicereus undatus HOM05D000420 ORTHO05D000110 2.9e-06 56.2 128 28.1
Hund28416 Selenicereus undatus HOM05D000420 ORTHO05D000110 2.9e-06 56.2 128 28.1
Hund01561 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 28.1
Hund04142 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 28.1
Hund04723 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 135 28.1
Hund05220 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 28.1
Hund08455 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 27.3
Hund09941 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 28.1
Hund10336 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 27.3
Hund15761 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 28.1
Hund16073 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 27.3
Hund17200 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 130 28.5
Hund18493 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 28.1
Hund27871 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 28.1
Hund28661 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 28.1
Hund28662 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 28.1
Hund29393 Selenicereus undatus HOM05D000420 ORTHO05D000110 3.8e-06 55.8 128 28.1
TWI56G0122 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 3.8e-06 55.8 101 35.6
TWI73G0935 Tripterygium wilfordii HOM05D000420 ORTHO05D000110 3.8e-06 55.8 110 27.3
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 5.0e-06 55.5 87 33.3
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 5.0e-06 55.5 87 33.3
Hund19976 Selenicereus undatus HOM05D000420 ORTHO05D000110 5.0e-06 55.5 133 30.1
Hund24355 Selenicereus undatus HOM05D000420 ORTHO05D000110 5.0e-06 55.5 128 28.1
Hund26414 Selenicereus undatus HOM05D000420 ORTHO05D000110 5.0e-06 55.5 128 28.1
Ca_24115_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 6.5e-06 55.1 56 44.6
Ca_24290_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 6.5e-06 55.1 56 46.4
Oeu027634.1 Olea europaea HOM05D019573 ORTHO05D016360 6.5e-06 55.1 79 35.4
Hund03489 Selenicereus undatus HOM05D000420 ORTHO05D000110 8.5e-06 54.7 130 30.8
Hund07676 Selenicereus undatus HOM05D000420 ORTHO05D000110 8.5e-06 54.7 128 27.3
Hund19802 Selenicereus undatus HOM05D009125 ORTHO05D000110 8.5e-06 54.7 99 34.3
Hund30087 Selenicereus undatus HOM05D000420 ORTHO05D000110 8.5e-06 54.7 128 28.1


User provided reference genes

Program Settings