Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 1.2e-86 323.2 167 100.0
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 3.9e-85 318.2 167 97.6
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 2.9e-80 302.0 167 92.2
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 8.6e-77 290.4 167 90.4
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 5.4e-71 271.2 167 82.6
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 5.4e-71 271.2 167 82.0
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 8.7e-69 263.8 166 80.7
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 1.9e-68 262.7 166 79.5
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 1.8e-66 256.1 165 77.0
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 6.4e-64 247.7 163 76.7
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 1.1e-63 246.9 167 73.7
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 3.5e-62 241.9 166 75.9
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 1.3e-56 223.4 167 65.3
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 2.2e-56 222.6 165 69.1
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 3.8e-56 221.9 165 68.5
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 2.7e-54 215.7 163 62.6
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 1.3e-53 213.4 163 61.3
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.8e-53 213.0 163 63.2
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 6.7e-53 211.1 167 64.1
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 1.5e-52 209.9 163 62.0
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.3e-52 208.8 163 61.3
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 4.3e-52 208.4 166 62.7
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 4.3e-52 208.4 163 60.7
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 5.6e-52 208.0 162 61.7
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 1.6e-51 206.5 166 65.1
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 1.6e-51 206.5 164 64.6
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 1.6e-51 206.5 163 61.3
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 6.2e-51 204.5 166 64.5
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 6.2e-51 204.5 167 59.9
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 1.4e-50 203.4 162 59.9
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 4.0e-50 201.8 166 59.0
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 5.3e-50 201.4 166 61.4
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 5.3e-50 201.4 166 61.4
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 1.2e-49 200.3 166 60.8
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 1.2e-49 200.3 166 60.8
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 2.0e-49 199.5 159 62.3
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 2.0e-49 199.5 159 62.3
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 3.4e-49 198.7 166 60.2
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 5.8e-49 198.0 163 62.0
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 1.0e-48 197.2 160 61.2
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 2.2e-48 196.1 167 59.3
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 2.2e-48 196.1 166 58.4
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 4.9e-48 194.9 166 59.0
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 4.9e-48 194.9 166 61.4
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 3.2e-47 192.2 163 57.1
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 7.1e-47 191.0 160 61.9
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 7.1e-47 191.0 167 60.5
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 7.1e-47 191.0 165 60.6
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 1.2e-46 190.3 163 58.3
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 4.6e-46 188.3 165 58.2
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 1.8e-45 186.4 163 54.6
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 2.3e-45 186.0 167 53.9
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 5.1e-45 184.9 163 60.1
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 3.3e-44 182.2 163 55.8
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 4.3e-44 181.8 166 55.4
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 5.7e-44 181.4 160 59.4
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 1.3e-43 180.3 166 56.0
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 3.7e-43 178.7 162 53.7
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 4.8e-43 178.3 159 56.0
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 1.8e-42 176.4 167 53.9
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 2.4e-42 176.0 166 55.4
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 2.4e-42 176.0 162 53.1
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 2.0e-41 172.9 160 55.6
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 2.0e-41 172.9 162 52.5
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 2.6e-41 172.6 162 52.5
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 3.4e-41 172.2 162 52.5
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 5.9e-41 171.4 165 53.3
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 7.6e-41 171.0 162 51.9
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 1.0e-40 170.6 162 49.4
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.0e-40 170.6 162 54.9
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 2.9e-40 169.1 159 52.8
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.1e-39 167.2 162 50.6
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 1.9e-39 166.4 167 50.3
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 9.3e-39 164.1 140 60.7
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 9.3e-39 164.1 159 54.1
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 7.9e-38 161.0 129 63.6
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 1.0e-37 160.6 163 51.5
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 1.4e-37 160.2 159 49.1
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 2.3e-37 159.5 160 51.2
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 5.1e-37 158.3 167 49.7
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 6.7e-37 157.9 159 49.7
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 4.3e-36 155.2 160 50.6
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 4.3e-36 155.2 163 48.5
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 1.3e-35 153.7 160 50.0
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 2.4e-34 149.4 156 51.3
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 1.5e-33 146.7 156 50.6
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 1.5e-33 146.7 156 50.6
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 1.5e-33 146.7 159 50.9
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 3.4e-33 145.6 155 50.3
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 3.4e-33 145.6 161 50.9
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 4.5e-33 145.2 156 50.6
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 4.5e-33 145.2 156 50.6
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 7.7e-33 144.4 156 51.3
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 7.7e-33 144.4 156 49.4
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 7.7e-33 144.4 157 49.7
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 1.7e-32 143.3 156 50.0
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 5.0e-32 141.7 156 50.0
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 6.5e-32 141.4 161 47.8
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 2.5e-31 139.4 156 48.1
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.1e-30 136.3 108 60.2
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 2.7e-30 136.0 155 48.4
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 4.7e-30 135.2 159 44.0
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 2.0e-28 129.8 159 45.3
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 1.3e-27 127.1 158 40.5
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 3.7e-27 125.6 167 40.1
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 3.7e-27 125.6 158 43.0
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 1.8e-26 123.2 160 43.8
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 4.1e-26 122.1 159 39.0
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 5.3e-26 121.7 155 43.2
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 1.9e-15 86.7 117 45.3
BolC2t06938H Brassica oleracea HOM05D005666 ORTHO05D043081 3.0e-13 79.3 107 45.8
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 5.0e-08 62.0 91 37.4
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 1.1e-07 60.8 113 40.7
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 5.5e-07 58.5 122 31.1
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 1.2e-06 57.4 127 30.7


User provided reference genes

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