Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20314 Trifolium pratense HOM05D000395 ORTHO05D000088 1.6e-83 313.2 208 100.0
TPR.G27879 Trifolium pratense HOM05D000395 ORTHO05D000088 2.0e-59 233.0 237 67.1
TPR.G14731 Trifolium pratense HOM05D000395 ORTHO05D000088 3.8e-58 228.8 229 68.1
TPR.G14716 Trifolium pratense HOM05D000395 ORTHO05D000088 2.1e-56 223.0 240 65.0
Medtr3g061310 Medicago truncatula HOM05D000395 ORTHO05D000088 5.1e-42 175.3 228 49.6
Medtr3g061330 Medicago truncatula HOM05D000395 ORTHO05D000088 1.1e-41 174.1 229 48.5
Medtr3g061350 Medicago truncatula HOM05D000395 ORTHO05D000088 9.5e-41 171.0 229 48.5
TPR.G28177 Trifolium pratense HOM05D000395 ORTHO05D000088 6.2e-40 168.3 229 55.5
Psat5g163600 Pisum sativum HOM05D000395 ORTHO05D000088 2.0e-38 163.3 229 45.0
Medtr3g061340 Medicago truncatula HOM05D000395 ORTHO05D000088 2.6e-38 162.9 229 46.7
Medtr3g061370 Medicago truncatula HOM05D000395 ORTHO05D000088 2.6e-38 162.9 226 47.8
Psat5g163560 Pisum sativum HOM05D000395 ORTHO05D000088 1.9e-36 156.8 228 43.0
Medtr3g061320 Medicago truncatula HOM05D000395 ORTHO05D000088 1.2e-35 154.1 230 47.0
Lj3g0025473 Lotus japonicus HOM05D000395 ORTHO05D000088 7.8e-27 124.8 229 39.3
Medtr3g061290 Medicago truncatula HOM05D000395 ORTHO05D000088 3.3e-25 119.4 211 43.1
arahy.Tifrunner.gnm1.ann1.T57XL4 Arachis hypogaea HOM05D000395 ORTHO05D000088 1.2e-24 117.5 225 38.7
arahy.Tifrunner.gnm1.ann1.WFEC9T Arachis hypogaea HOM05D000395 ORTHO05D000088 1.6e-24 117.1 225 39.1
arahy.Tifrunner.gnm1.ann1.68615N Arachis hypogaea HOM05D000395 ORTHO05D000088 2.8e-24 116.3 228 37.7
arahy.Tifrunner.gnm1.ann1.ICSV9P Arachis hypogaea HOM05D000395 ORTHO05D000088 1.1e-23 114.4 226 38.5
Medtr3g061220 Medicago truncatula HOM05D000395 ORTHO05D000088 4.0e-23 112.5 122 54.9
arahy.Tifrunner.gnm1.ann1.B2IBRN Arachis hypogaea HOM05D000395 ORTHO05D000088 4.4e-22 109.0 232 36.6
Glyma.20G108400 Glycine max HOM05D000395 ORTHO05D000088 5.8e-22 108.6 227 37.4
TPR.G14727 Trifolium pratense HOM05D000395 ORTHO05D000088 9.3e-20 101.3 127 60.6
TPR.G2870 Trifolium pratense HOM05D000395 ORTHO05D000088 3.5e-19 99.4 49 98.0
Phvul.007G019700 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 7.8e-19 98.2 218 33.5
Phvul.007G019600 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 5.6e-17 92.0 224 31.2
Lj5g0002825 Lotus japonicus HOM05D000395 ORTHO05D000088 1.3e-16 90.9 226 32.7
Glyma.20G108300 Glycine max HOM05D000395 ORTHO05D000088 3.1e-15 86.3 228 31.1
Lj3g0020056 Lotus japonicus HOM05D000395 ORTHO05D000088 1.2e-11 74.3 193 31.6
Phvul.007G022900 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 1.5e-09 67.4 224 26.3
arahy.Tifrunner.gnm1.ann1.VU4W20 Arachis hypogaea HOM05D000395 ORTHO05D000088 3.3e-09 66.2 230 29.1
arahy.Tifrunner.gnm1.ann1.EGZ7D9 Arachis hypogaea HOM05D000395 ORTHO05D000088 4.3e-09 65.9 227 30.4
Manes.07G115100 Manihot esculenta HOM05D000395 ORTHO05D000088 4.3e-09 65.9 230 28.7
VMungo0720G0026 Vigna mungo HOM05D000395 ORTHO05D000088 7.4e-09 65.1 204 29.4
arahy.Tifrunner.gnm1.ann1.G405E6 Arachis hypogaea HOM05D000395 ORTHO05D000088 1.3e-08 64.3 227 30.0
Lj2g0019967 Lotus japonicus HOM05D000395 ORTHO05D000088 2.1e-08 63.5 195 31.3
Lalb_Chr10g0095151 Lupinus albus HOM05D000395 ORTHO05D000088 8.1e-08 61.6 208 29.8
TPR.G14798 Trifolium pratense HOM05D000395 ORTHO05D000088 1.1e-07 61.2 189 28.0
arahy.Tifrunner.gnm1.ann1.Y03UJB Arachis hypogaea HOM05D000395 ORTHO05D000088 1.8e-07 60.5 242 28.1
Lalb_Chr06g0163601 Lupinus albus HOM05D000395 ORTHO05D000088 3.1e-07 59.7 195 30.8
TPR.G27881 Trifolium pratense HOM05D001532 ORTHO05D001402 5.3e-07 58.9 49 57.1
arahy.Tifrunner.gnm1.ann1.335W22 Arachis hypogaea HOM05D000395 ORTHO05D000088 9.0e-07 58.2 107 38.3
arahy.Tifrunner.gnm1.ann1.SU40KZ Arachis hypogaea HOM05D000395 ORTHO05D000088 9.0e-07 58.2 232 27.6
Medtr3g061300 Medicago truncatula HOM05D000395 ORTHO05D000088 1.2e-06 57.8 44 59.1
arahy.Tifrunner.gnm1.ann1.IP8AWM Arachis hypogaea HOM05D000395 ORTHO05D000088 1.5e-06 57.4 240 27.5
Glyma.07G157300 Glycine max HOM05D000395 ORTHO05D000088 1.5e-06 57.4 107 31.8
Glyma.09G114900 Glycine max HOM05D000395 ORTHO05D000088 1.5e-06 57.4 208 29.3
Lj2g0003753 Lotus japonicus HOM05D000395 ORTHO05D000088 2.0e-06 57.0 194 29.9
Lj5g0011145 Lotus japonicus HOM05D000395 ORTHO05D000088 2.0e-06 57.0 201 28.9
arahy.Tifrunner.gnm1.ann1.KVNU80 Arachis hypogaea HOM05D000395 ORTHO05D000088 5.8e-06 55.5 107 36.4
arahy.Tifrunner.gnm1.ann1.84B6CG Arachis hypogaea HOM05D000395 ORTHO05D000088 7.6e-06 55.1 236 27.5
arahy.Tifrunner.gnm1.ann1.Y4D700 Arachis hypogaea HOM05D000395 ORTHO05D000088 7.6e-06 55.1 102 34.3
arahy.Tifrunner.gnm1.ann1.Q52IRU Arachis hypogaea HOM05D000395 ORTHO05D000088 9.9e-06 54.7 107 31.8


User provided reference genes

Program Settings