Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 2.0e-112 409.1 199 100.0
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 5.6e-99 364.4 199 88.9
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 3.6e-98 361.7 197 89.3
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 4.2e-94 348.2 192 84.4
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 4.6e-93 344.7 197 84.3
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 1.7e-92 342.8 192 83.3
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 3.9e-92 341.7 192 83.3
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 2.5e-91 339.0 197 82.2
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 4.3e-91 338.2 197 84.3
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 9.6e-91 337.0 197 82.2
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 1.3e-79 300.1 198 70.7
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 2.9e-79 298.9 190 74.2
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.9e-79 298.9 197 72.1
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.9e-79 298.9 190 74.2
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 2.9e-79 298.9 190 74.7
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 2.9e-79 298.9 197 70.6
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 4.9e-79 298.1 190 73.7
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 6.5e-79 297.7 198 70.2
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 6.5e-79 297.7 198 70.2
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 1.4e-78 296.6 190 73.7
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 2.5e-78 295.8 190 72.6
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 4.2e-78 295.0 198 70.7
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 5.5e-78 294.7 199 68.8
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 7.1e-78 294.3 197 71.1
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 9.3e-78 293.9 197 69.5
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 1.6e-77 293.1 190 71.6
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 2.1e-77 292.7 198 69.2
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 6.0e-77 291.2 195 67.7
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 1.3e-76 290.0 194 68.6
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 2.3e-76 289.3 190 68.4
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 5.1e-76 288.1 190 71.6
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 5.1e-76 288.1 190 71.6
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 6.7e-76 287.7 197 68.0
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 8.7e-76 287.3 208 67.8
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 8.7e-76 287.3 191 70.7
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 2.5e-75 285.8 197 70.6
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 1.3e-74 283.5 200 68.5
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 2.1e-74 282.7 198 67.2
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 2.1e-74 282.7 194 69.1
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 8.2e-74 280.8 190 69.5
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 1.1e-73 280.4 198 68.7
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 1.1e-73 280.4 190 68.9
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 1.4e-73 280.0 197 65.0
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 1.4e-73 280.0 198 68.2
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 3.1e-73 278.9 198 65.7
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 4.1e-73 278.5 192 69.8
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 4.1e-73 278.5 198 66.2
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 5.3e-73 278.1 190 67.9
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 9.0e-73 277.3 190 70.0
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 2.0e-72 276.2 195 67.7
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 2.6e-72 275.8 198 64.1
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 4.5e-72 275.0 197 64.0
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 7.6e-72 274.2 202 66.3
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 1.3e-71 273.5 197 63.5
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 2.9e-71 272.3 197 62.9
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 6.5e-71 271.2 197 62.9
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 8.5e-71 270.8 197 62.4
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 8.5e-71 270.8 190 66.8
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 1.9e-70 269.6 200 64.5
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 4.2e-70 268.5 198 65.2
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 5.5e-70 268.1 179 70.9
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 1.2e-69 266.9 166 73.5
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 2.1e-69 266.2 177 71.2
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 3.6e-69 265.4 197 61.4
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 3.6e-69 265.4 197 63.5
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 4.6e-69 265.0 198 62.6
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 6.1e-69 264.6 197 61.4
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 6.1e-69 264.6 197 60.9
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 6.1e-69 264.6 197 60.9
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 6.1e-69 264.6 194 62.4
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 7.9e-69 264.2 180 70.0
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 1.3e-68 263.5 166 72.9
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 1.8e-68 263.1 195 61.0
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 3.9e-68 261.9 167 74.3
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 1.9e-67 259.6 196 61.7
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 1.9e-67 259.6 167 70.1
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 4.3e-67 258.5 190 60.0
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 2.4e-65 252.7 190 58.9
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 3.1e-65 252.3 199 58.8
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 1.0e-63 247.3 197 58.9
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 1.4e-62 243.4 159 71.1
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 1.2e-61 240.4 195 57.9
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 3.6e-61 238.8 197 53.8
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 8.8e-60 234.2 154 69.5
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 9.7e-59 230.7 173 60.1
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 9.7e-59 230.7 166 68.1
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 1.3e-58 230.3 198 58.6
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 2.2e-58 229.6 167 65.3
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 4.8e-58 228.4 191 55.5
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 8.2e-58 227.6 198 56.1
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 2.0e-56 223.0 166 65.1
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 3.4e-56 222.2 197 56.3
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 8.5e-55 217.6 190 56.8
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 4.2e-54 215.3 219 49.3
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 9.4e-54 214.2 191 52.9
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 1.0e-52 210.7 197 49.2
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 1.1e-49 200.7 199 49.2
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.4e-49 200.3 132 70.5
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.4e-49 200.3 132 70.5
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 5.9e-48 194.9 132 65.2
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 1.3e-47 193.7 190 51.1
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 5.5e-46 188.3 190 42.1
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 2.0e-43 179.9 195 46.7
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 7.0e-41 171.4 171 52.0
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 2.0e-40 169.9 102 74.5
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 3.6e-37 159.1 92 78.3
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 5.9e-32 141.7 192 38.0
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 2.5e-30 136.3 108 60.2
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 1.6e-29 133.7 269 33.8
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 3.6e-29 132.5 90 65.6
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 8.8e-28 127.9 109 54.1
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 7.8e-24 114.8 181 31.5
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 2.5e-22 109.8 75 68.0
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 6.1e-21 105.1 77 62.3
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 2.4e-17 93.2 202 34.2
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 5.9e-16 88.6 134 35.1
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 9.5e-14 81.3 52 67.3
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 2.1e-13 80.1 58 56.9
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 4.0e-12 75.9 57 56.1
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 2.6e-11 73.2 62 54.8
Haze_15680 Corylus avellana HOM05D000026 ORTHO05D008596 5.8e-11 72.0 47 72.3


User provided reference genes

Program Settings