Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G202 Trifolium pratense HOM05D001076 ORTHO05D001603 4.6e-133 478.0 262 100.0
Psat5g011240 Pisum sativum HOM05D001076 ORTHO05D001603 3.2e-70 269.2 256 62.5
Medtr3g114450 Medicago truncatula HOM05D001076 ORTHO05D001603 3.7e-66 255.8 233 66.1
TPR.G38088 Trifolium pratense HOM05D001076 ORTHO05D001603 1.4e-60 237.3 181 81.2
Ca_15475_v3 Cicer arietinum L. HOM05D001076 ORTHO05D001603 4.0e-60 235.7 232 63.4
Medtr3g114340 Medicago truncatula HOM05D001076 ORTHO05D001603 6.3e-58 228.4 221 62.0
Lj1g0020044 Lotus japonicus HOM05D001076 ORTHO05D001603 8.3e-34 148.3 239 48.5
Glyma.04G021900 Glycine max HOM05D001076 ORTHO05D001603 1.9e-30 137.1 233 45.1
Glyma.06G022100 Glycine max HOM05D001076 ORTHO05D001603 2.1e-29 133.7 233 45.9
VMungo1309G2341 Vigna mungo HOM05D001076 ORTHO05D001603 2.1e-29 133.7 237 42.6
Lalb_Chr03g0033491 Lupinus albus HOM05D001076 ORTHO05D001603 3.1e-28 129.8 237 44.3
Phvul.009G018800 Phaseolus vulgaris HOM05D001076 ORTHO05D001603 4.0e-28 129.4 232 42.2
Lalb_Chr19g0131511 Lupinus albus HOM05D001076 ORTHO05D001603 9.9e-27 124.8 240 42.9
arahy.Tifrunner.gnm1.ann1.XZS3UD Arachis hypogaea HOM05D001076 ORTHO05D001603 6.4e-26 122.1 252 39.3
arahy.Tifrunner.gnm1.ann1.YJWL0V Arachis hypogaea HOM05D001076 ORTHO05D001603 2.4e-25 120.2 255 39.6
TPR.G26377 Trifolium pratense HOM05D001076 ORTHO05D001603 2.7e-24 116.7 269 41.6
arahy.Tifrunner.gnm1.ann1.Q99BEQ Arachis hypogaea HOM05D001076 ORTHO05D001603 5.1e-23 112.5 252 37.7
Lj5g0020448 Lotus japonicus HOM05D001076 ORTHO05D001603 5.1e-23 112.5 251 41.8
arahy.Tifrunner.gnm1.ann1.Q38LJP Arachis hypogaea HOM05D001076 ORTHO05D001603 8.6e-23 111.7 256 39.5
Prupe.1G361000 Prunus persica HOM05D001076 ORTHO05D001603 7.3e-22 108.6 259 37.8
Cfa013990 Carpinus fangiana HOM05D001076 ORTHO05D001603 9.6e-22 108.2 251 39.0
VMungo0647G1732 Vigna mungo HOM05D001076 ORTHO05D001603 3.1e-20 103.2 254 39.0
Duzib093G0045 Durio zibethinus HOM05D001076 ORTHO05D001603 8.9e-20 101.7 230 41.3
Glyma.17G260000 Glycine max HOM05D001076 ORTHO05D001603 8.9e-20 101.7 267 42.3
Lalb_Chr01g0008541 Lupinus albus HOM05D001076 ORTHO05D001603 2.0e-19 100.5 252 36.5
Manes.18G011260 Manihot esculenta HOM05D001076 ORTHO05D001603 2.6e-19 100.1 248 39.1
Haze_22677 Corylus avellana HOM05D001076 ORTHO05D001603 5.8e-19 99.0 241 38.2
Atru.chr13.243 Acer truncatum HOM05D001076 ORTHO05D001603 1.3e-18 97.8 244 42.2
Potri.005G243600 Populus trichocarpa HOM05D001076 ORTHO05D001603 1.3e-18 97.8 243 36.2
VMungo0647G2282 Vigna mungo HOM05D001076 ORTHO05D001603 1.7e-18 97.4 252 38.5
Glyma.14G221100 Glycine max HOM05D001076 ORTHO05D001603 2.9e-18 96.7 257 40.9
MD08G1009300 Malus domestica HOM05D001076 ORTHO05D001603 6.4e-18 95.5 245 38.0
Phvul.001G004100 Phaseolus vulgaris HOM05D001076 ORTHO05D001603 2.4e-17 93.6 261 38.3
Gohir.D01G096400 Gossypium hirsutum HOM05D001076 ORTHO05D001603 3.2e-17 93.2 251 37.1
FAN27G0608 Fragaria x ananassa HOM05D001076 ORTHO05D001603 5.4e-17 92.4 245 37.6
CiPaw.08G068500 Carya illinoinensis HOM05D001076 ORTHO05D001603 7.1e-17 92.0 242 36.4
Gohir.A01G109600 Gossypium hirsutum HOM05D001076 ORTHO05D001603 9.3e-17 91.7 239 39.3
MD15G1008200 Malus domestica HOM05D001076 ORTHO05D001603 2.1e-16 90.5 253 36.4
RcHm_v2.0_Chr6g0303491 Rosa chinensis HOM05D001076 ORTHO05D001603 2.1e-16 90.5 241 36.9
Cpa.g.sc26.285 Carica papaya HOM05D001076 ORTHO05D001603 2.7e-16 90.1 254 36.6
Gorai.002G121900 Gossypium raimondii HOM05D001076 ORTHO05D001603 3.5e-16 89.7 244 38.1
CiPaw.07G145200 Carya illinoinensis HOM05D001076 ORTHO05D001603 6.0e-16 89.0 257 35.8
GSVIVG01009971001 Vitis vinifera HOM05D001076 ORTHO05D001603 1.0e-15 88.2 253 36.0
FvH4_2g38070 Fragaria vesca HOM05D001076 ORTHO05D001603 1.3e-15 87.8 240 36.7
TWI56G0858 Tripterygium wilfordii HOM05D001076 ORTHO05D001603 2.3e-15 87.0 246 37.4
Medtr1g025920 Medicago truncatula HOM05D001076 ORTHO05D001603 3.9e-15 86.3 246 39.0
TWI36G1177 Tripterygium wilfordii HOM05D001076 ORTHO05D001603 3.9e-15 86.3 243 37.4
Ciclev10000767m.g Citrus clementina HOM05D001076 ORTHO05D001603 5.1e-15 85.9 264 38.6
Eucgr.F01675 Eucalyptus grandis HOM05D001076 ORTHO05D001603 6.6e-15 85.5 253 36.4
Sabra05G0188600 Salix brachista HOM05D001076 ORTHO05D001603 6.6e-15 85.5 243 36.2
Nn6g31956 Nelumbo nucifera HOM05D001076 ORTHO05D001603 1.1e-14 84.7 242 35.5
FAN20G0221 Fragaria x ananassa HOM05D001076 ORTHO05D001603 4.3e-14 82.8 240 36.7
Dinv08560 Davidia involucrata HOM05D001076 ORTHO05D001603 9.6e-14 81.6 273 34.1
Thecc.08G049100 Theobroma cacao HOM05D001076 ORTHO05D001603 9.6e-14 81.6 232 37.9
Duzib116G0334 Durio zibethinus HOM05D001076 ORTHO05D001603 1.6e-13 80.9 232 37.5
Phvul.001G004033 Phaseolus vulgaris HOM05D001076 ORTHO05D001603 2.1e-13 80.5 210 39.0
FAN15G2372 Fragaria x ananassa HOM05D001076 ORTHO05D001603 1.8e-12 77.4 239 36.8
Nitab4.5_0000188g0180 Nicotiana tabacum HOM05D001076 ORTHO05D001603 1.8e-12 77.4 265 33.6
TAR376G0483 Trochodendron aralioides HOM05D001076 ORTHO05D001603 5.3e-12 75.9 253 34.0
Nitab4.5_0002337g0160 Nicotiana tabacum HOM05D001076 ORTHO05D001603 1.2e-11 74.7 264 34.1
Manes.02G109100 Manihot esculenta HOM05D001076 ORTHO05D001603 2.0e-11 73.9 260 36.5
Solyc02g061960.3 Solanum lycopersicum HOM05D001076 ORTHO05D001603 2.6e-11 73.6 241 34.4
TAR628G0873 Trochodendron aralioides HOM05D001076 ORTHO05D001603 2.6e-11 73.6 276 32.2
QL02p012478 Quercus lobata HOM05D001076 ORTHO05D001603 4.4e-11 72.8 246 35.8
CSS0032713 Camellia sinensis var. sinensis HOM05D001076 ORTHO05D001603 5.8e-11 72.4 209 35.4
Nitab4.5_0000188g0170 Nicotiana tabacum HOM05D001076 ORTHO05D001603 5.8e-11 72.4 246 33.7
CSS0013209 Camellia sinensis var. sinensis HOM05D001076 ORTHO05D001603 9.9e-11 71.6 251 35.9
Nitab4.5_0002337g0100 Nicotiana tabacum HOM05D001076 ORTHO05D001603 1.3e-10 71.2 259 33.2
Sopen02g012920 Solanum pennellii HOM05D001076 ORTHO05D001603 2.2e-10 70.5 127 43.3
Actinidia35668 Actinidia chinensis HOM05D001076 ORTHO05D001603 2.9e-10 70.1 253 34.8
Lj4C223T13 Lonicera japonica HOM05D001076 ORTHO05D001603 2.9e-10 70.1 264 33.7
ECA238G1726 Erigeron canadensis HOM05D001076 ORTHO05D001603 3.8e-10 69.7 272 35.3
Sopen02g012940 Solanum pennellii HOM05D001076 ORTHO05D001603 3.8e-10 69.7 240 33.8
Solyc02g061980.3 Solanum lycopersicum HOM05D001076 ORTHO05D001603 1.1e-09 68.2 240 33.8
Actinidia02366 Actinidia chinensis HOM05D001076 ORTHO05D001603 2.4e-09 67.0 255 34.5
ClCG05G015530 Citrullus lanatus HOM05D001076 ORTHO05D001603 4.2e-09 66.2 247 34.8
GSVIVG01006333001 Vitis vinifera HOM05D001076 ORTHO05D001603 5.4e-09 65.9 239 34.7
Hma1.2p1_0733F.1_g210100 Hydrangea macrophylla HOM05D001076 ORTHO05D001603 7.1e-09 65.5 229 33.6
MD02G1125000 Malus domestica HOM05D001076 ORTHO05D001603 7.1e-09 65.5 235 39.1
Cc10_g01320 Coffea canephora HOM05D001076 ORTHO05D001603 1.6e-08 64.3 230 33.5
MSTRG.15584 Avicennia marina HOM05D001076 ORTHO05D001603 2.1e-08 63.9 269 30.9
Lsat_1_v5_gn_3_71281 Lactuca sativa HOM05D001076 ORTHO05D001603 2.1e-08 63.9 210 33.8
Migut.N03180 Erythranthe guttata HOM05D001076 ORTHO05D001603 3.5e-08 63.2 261 32.2
COL.COLO4_26105 Corchorus olitorius HOM05D001076 ORTHO05D001603 4.6e-08 62.8 112 42.0
Lj2A482G64 Lonicera japonica HOM05D001076 ORTHO05D001603 6.0e-08 62.4 149 40.3
Hma1.2p1_0315F.1_g122430 Hydrangea macrophylla HOM05D001076 ORTHO05D001603 7.8e-08 62.0 238 33.6
Actinidia28723 Actinidia chinensis HOM05D001076 ORTHO05D001603 1.0e-07 61.6 261 33.7
HanXRQChr14g0441741 Helianthus annuus HOM05D001076 ORTHO05D001603 1.0e-07 61.6 198 33.8
Lj4A19T11 Lonicera japonica HOM05D001076 ORTHO05D001603 1.0e-07 61.6 251 32.7
Sc15g0004760 Simmondsia chinensis HOM05D001076 ORTHO05D001603 1.0e-07 61.6 232 33.6
Oeu039729.1 Olea europaea HOM05D001076 ORTHO05D001603 1.3e-07 61.2 217 33.6
Sc02g0008750 Simmondsia chinensis HOM05D001076 ORTHO05D001603 1.3e-07 61.2 237 34.2
CAN.G576.3 Capsicum annuum HOM05D001076 ORTHO05D001603 2.3e-07 60.5 261 31.4
DCAR_022939 Daucus carota HOM05D001076 ORTHO05D001603 2.3e-07 60.5 256 30.1
Lsat_1_v5_gn_4_144940 Lactuca sativa HOM05D001076 ORTHO05D001603 3.0e-07 60.1 248 32.3
unitig_747.g21526 Utricularia gibba HOM05D001076 ORTHO05D001603 3.0e-07 60.1 241 32.8
Aqoxy6G02124 Aquilegia oxysepala HOM05D001076 ORTHO05D001603 3.9e-07 59.7 232 31.5
TAR625G1154 Trochodendron aralioides HOM05D001076 ORTHO05D001603 5.1e-07 59.3 228 30.7
ClCG01G020520 Citrullus lanatus HOM05D001076 ORTHO05D001603 6.6e-07 58.9 212 32.5
CAN.G576.6 Capsicum annuum HOM05D001076 ORTHO05D001603 8.7e-07 58.5 262 30.9
HanXRQChr14g0429641 Helianthus annuus HOM05D001076 ORTHO05D001603 1.1e-06 58.2 247 28.7
MELO3C007932.2 Cucumis melo HOM05D001076 ORTHO05D001603 1.5e-06 57.8 228 32.5
CsaV3_6G047400 Cucumis sativus L. HOM05D001076 ORTHO05D001603 1.5e-06 57.8 228 32.0
QL04p027419 Quercus lobata HOM05D001076 ORTHO05D001603 2.5e-06 57.0 180 36.7
Lsat_1_v5_gn_8_29700 Lactuca sativa HOM05D001076 ORTHO05D001603 3.3e-06 56.6 237 30.4
Oeu051160.1 Olea europaea HOM05D001076 ORTHO05D001603 3.3e-06 56.6 225 32.4
CiPaw.08G127500 Carya illinoinensis HOM05D001076 ORTHO05D001603 5.6e-06 55.8 223 33.6
MELO3C003736.2 Cucumis melo HOM05D001076 ORTHO05D001603 7.3e-06 55.5 248 33.1
CsaV3_3G046030 Cucumis sativus L. HOM05D001076 ORTHO05D001603 7.3e-06 55.5 247 32.8
CAN.G311.57 Capsicum annuum HOM05D001076 ORTHO05D001603 9.6e-06 55.1 238 32.8


User provided reference genes

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