Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 1.0e-70 270.0 130 100.0
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 4.6e-63 244.6 129 89.9
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 3.0e-62 241.9 129 89.1
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 7.5e-58 227.3 131 84.0
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 3.4e-50 201.8 133 72.2
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 8.4e-49 197.2 131 73.3
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 1.9e-48 196.1 129 74.4
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 3.5e-47 191.8 131 73.3
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 3.5e-47 191.8 131 73.3
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 1.0e-46 190.3 128 72.7
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 1.1e-45 186.8 131 71.8
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 1.1e-45 186.8 131 71.8
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 1.1e-45 186.8 131 71.8
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 9.6e-45 183.7 158 62.0
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 6.2e-44 181.0 129 71.3
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 2.4e-43 179.1 129 70.5
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 6.9e-43 177.6 133 66.2
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 6.9e-43 177.6 133 67.7
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 1.2e-42 176.8 133 65.4
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 2.6e-42 175.6 129 68.2
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 4.4e-42 174.9 134 69.4
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 5.8e-42 174.5 128 68.8
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 3.8e-41 171.8 129 67.4
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 4.9e-41 171.4 131 62.6
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 4.9e-41 171.4 131 62.6
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 4.9e-41 171.4 134 64.9
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 4.9e-41 171.4 134 64.9
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 1.1e-40 170.2 126 65.9
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 1.1e-40 170.2 133 65.4
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 4.2e-40 168.3 131 66.4
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 4.2e-40 168.3 126 65.1
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 4.2e-40 168.3 134 63.4
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 7.1e-40 167.5 133 63.2
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 1.2e-39 166.8 130 61.5
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 1.6e-39 166.4 132 61.4
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 3.5e-39 165.2 127 64.6
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 4.6e-39 164.9 130 65.4
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 4.6e-39 164.9 131 61.1
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 6.0e-39 164.5 124 66.9
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 7.8e-39 164.1 130 62.3
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 7.8e-39 164.1 138 65.2
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 1.3e-38 163.3 129 64.3
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 6.6e-38 161.0 130 62.3
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 6.6e-38 161.0 130 62.3
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 1.5e-37 159.8 131 61.8
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 5.6e-37 157.9 94 75.5
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 5.6e-37 157.9 130 61.5
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 7.3e-37 157.5 130 60.8
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 1.3e-36 156.8 132 58.3
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 1.3e-36 156.8 132 58.3
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 1.3e-36 156.8 132 58.3
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 1.3e-36 156.8 91 80.2
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 1.6e-36 156.4 126 61.1
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 2.8e-36 155.6 106 67.0
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 3.6e-36 155.2 135 57.8
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 3.6e-36 155.2 132 61.4
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 4.8e-36 154.8 141 56.7
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 8.1e-36 154.1 133 56.4
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 8.1e-36 154.1 132 57.6
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 8.1e-36 154.1 133 59.4
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 8.1e-36 154.1 132 57.6
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 8.1e-36 154.1 133 59.4
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 1.1e-35 153.7 97 74.2
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 1.1e-35 153.7 130 60.0
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 1.4e-35 153.3 133 58.6
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 1.4e-35 153.3 133 58.6
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 1.4e-35 153.3 133 58.6
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 1.4e-35 153.3 138 57.2
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 1.4e-35 153.3 142 54.9
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 1.8e-35 152.9 137 58.4
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 1.8e-35 152.9 104 68.3
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 2.4e-35 152.5 128 63.3
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 6.9e-35 151.0 115 61.7
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 9.0e-35 150.6 92 72.8
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 1.2e-34 150.2 88 77.3
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.2e-34 150.2 132 58.3
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 1.2e-34 150.2 92 73.9
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 1.2e-34 150.2 135 58.5
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 1.5e-34 149.8 88 76.1
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 1.5e-34 149.8 135 59.3
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 2.0e-34 149.4 134 56.0
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 3.4e-34 148.7 136 57.4
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 5.8e-34 147.9 88 72.7
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 7.6e-34 147.5 117 62.4
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 7.6e-34 147.5 88 73.9
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 9.9e-34 147.1 89 74.2
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 9.9e-34 147.1 130 57.7
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 1.3e-33 146.7 128 60.2
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 2.2e-33 146.0 136 57.4
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 3.8e-33 145.2 132 56.8
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 4.9e-33 144.8 129 55.8
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 1.4e-32 143.3 126 56.3
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 2.4e-32 142.5 125 54.4
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 5.4e-32 141.4 93 72.0
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 5.4e-32 141.4 126 56.3
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 7.1e-32 141.0 93 72.0
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 7.1e-32 141.0 133 54.9
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 9.3e-32 140.6 112 63.4
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 9.3e-32 140.6 91 70.3
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 2.7e-31 139.0 130 56.2
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 4.6e-31 138.3 95 66.3
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 7.9e-31 137.5 91 68.1
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.3e-30 136.7 131 55.7
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 2.3e-30 136.0 122 57.4
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 2.3e-30 136.0 122 57.4
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 2.3e-30 136.0 126 53.2
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 3.9e-30 135.2 126 55.6
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 1.1e-29 133.7 88 67.0
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 6.2e-28 127.9 101 58.4
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 1.4e-27 126.7 96 60.4
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.8e-27 126.3 101 61.4
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 9.0e-27 124.0 102 52.9
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 3.8e-25 118.6 68 79.4
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 2.7e-23 112.5 100 52.0
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 4.6e-23 111.7 66 77.3
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 6.0e-23 111.3 88 54.5
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 1.8e-22 109.8 124 45.2
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 1.5e-21 106.7 70 64.3
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 1.9e-21 106.3 70 64.3
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 6.9e-19 97.8 87 54.0
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 1.3e-17 93.6 88 47.7
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 6.5e-17 91.3 76 51.3
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 2.5e-13 79.3 58 67.2
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 4.3e-13 78.6 77 57.1
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 8.2e-12 74.3 78 55.1
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 1.2e-07 60.5 58 53.4


User provided reference genes

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