Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20062 Trifolium pratense HOM05D007042 ORTHO05D008441 1.5e-65 252.7 129 100.0
Ca_08743_v3 Cicer arietinum L. HOM05D007042 ORTHO05D008441 1.8e-58 229.2 127 91.3
Psat3g054000 Pisum sativum HOM05D007042 ORTHO05D008441 2.4e-58 228.8 127 91.3
VMungo1383G0900 Vigna mungo HOM05D007042 ORTHO05D008441 3.4e-57 224.9 126 86.5
Glyma.03G167300 Glycine max HOM05D007042 ORTHO05D008441 1.7e-56 222.6 127 86.6
Medtr7g098470 Medicago truncatula HOM05D007042 ORTHO05D008441 5.0e-56 221.1 127 89.0
arahy.Tifrunner.gnm1.ann1.UI445S Arachis hypogaea HOM05D007042 ORTHO05D008441 6.5e-56 220.7 127 85.0
Phvul.001G164800 Phaseolus vulgaris HOM05D007042 ORTHO05D008441 1.4e-55 219.5 127 83.5
arahy.Tifrunner.gnm1.ann1.T4WIMW Arachis hypogaea HOM05D007042 ORTHO05D008441 3.2e-55 218.4 127 83.5
Glyma.19G168400 Glycine max HOM05D007042 ORTHO05D008441 5.5e-55 217.6 127 84.3
Lj1g0019034 Lotus japonicus HOM05D007042 ORTHO05D008441 1.0e-53 213.4 127 81.1
Ciclev10022455m.g Citrus clementina HOM05D007042 ORTHO05D008441 1.8e-50 202.6 127 78.0
Atru.chr5.1857 Acer truncatum HOM05D007042 ORTHO05D008441 4.1e-50 201.4 127 78.0
Duzib133G0775 Durio zibethinus HOM05D007042 ORTHO05D008441 7.0e-50 200.7 128 78.1
Thecc.01G250400 Theobroma cacao HOM05D007042 ORTHO05D008441 7.0e-50 200.7 127 78.7
Lalb_Chr20g0113621 Lupinus albus HOM05D007042 ORTHO05D008441 9.1e-50 200.3 127 78.7
Sabra02G0195200 Salix brachista HOM05D007042 ORTHO05D008441 1.0e-48 196.8 128 75.8
Dinv16402 Davidia involucrata HOM05D007042 ORTHO05D008441 3.8e-48 194.9 127 75.6
GSVIVG01028431001 Vitis vinifera HOM05D007042 ORTHO05D008441 5.0e-48 194.5 127 74.0
Manes.12G044501 Manihot esculenta HOM05D007042 ORTHO05D008441 8.5e-48 193.7 127 76.4
Potri.002G256700 Populus trichocarpa HOM05D007042 ORTHO05D008441 7.2e-47 190.7 128 76.6
TWI18G1052 Tripterygium wilfordii HOM05D007042 ORTHO05D008441 7.2e-47 190.7 127 74.0
Gorai.001G181700 Gossypium raimondii HOM05D007042 ORTHO05D008441 9.4e-47 190.3 127 74.0
Hma1.2p1_2139F.1_g314960 Hydrangea macrophylla HOM05D007042 ORTHO05D008441 9.4e-47 190.3 127 73.2
Gohir.A07G152300 Gossypium hirsutum HOM05D007042 ORTHO05D008441 2.1e-46 189.1 127 73.2
Cpa.g.sc87.28 Carica papaya HOM05D007042 ORTHO05D008441 3.6e-46 188.3 127 75.6
Dinv43069 Davidia involucrata HOM05D007042 ORTHO05D008441 4.7e-46 188.0 134 71.6
Sed0010391 Sechium edule HOM05D007042 ORTHO05D008441 4.7e-46 188.0 126 73.0
Gohir.D07G158500 Gossypium hirsutum HOM05D007042 ORTHO05D008441 1.4e-45 186.4 127 72.4
CSS0015019 Camellia sinensis var. sinensis HOM05D007042 ORTHO05D008441 5.2e-45 184.5 128 76.6
CiPaw.03G270900 Carya illinoinensis HOM05D007042 ORTHO05D008441 6.7e-45 184.1 127 71.7
Nn1g02976 Nelumbo nucifera HOM05D007042 ORTHO05D008441 1.5e-44 183.0 128 72.7
COL.COLO4_03573 Corchorus olitorius HOM05D007042 ORTHO05D008441 3.3e-44 181.8 108 84.3
CsaV3_6G007350 Cucumis sativus L. HOM05D007042 ORTHO05D008441 4.4e-44 181.4 128 70.3
Haze_24706 Corylus avellana HOM05D007042 ORTHO05D008441 9.7e-44 180.3 127 70.1
MELO3C022392.2 Cucumis melo HOM05D007042 ORTHO05D008441 9.7e-44 180.3 128 70.3
CiPaw.04G190700 Carya illinoinensis HOM05D007042 ORTHO05D008441 1.3e-43 179.9 127 70.9
Prupe.8G215500 Prunus persica HOM05D007042 ORTHO05D008441 2.8e-43 178.7 128 75.8
vmacro14796 Vaccinium macrocarpon HOM05D007042 ORTHO05D008441 2.8e-43 178.7 127 68.5
MD05G1188900 Malus domestica HOM05D007042 ORTHO05D008441 3.7e-43 178.3 129 72.9
RcHm_v2.0_Chr6g0286631 Rosa chinensis HOM05D007042 ORTHO05D008441 1.8e-42 176.0 130 66.9
TAR633G0993 Trochodendron aralioides HOM05D007042 ORTHO05D008441 1.8e-42 176.0 128 68.8
Actinidia09516 Actinidia chinensis HOM05D007042 ORTHO05D008441 2.4e-42 175.6 128 70.3
EL10Ac7g17687 Beta vulgaris HOM05D007042 ORTHO05D008441 3.1e-42 175.3 127 66.1
MD10G1176500 Malus domestica HOM05D007042 ORTHO05D008441 3.1e-42 175.3 130 71.5
CAN.G786.8 Capsicum annuum HOM05D007042 ORTHO05D008441 4.1e-42 174.9 127 70.1
THA.LOC104814528 Tarenaya hassleriana HOM05D007042 ORTHO05D008441 5.3e-42 174.5 127 70.1
FvH4_2g20510 Fragaria vesca HOM05D007042 ORTHO05D008441 9.1e-42 173.7 130 66.2
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 9.1e-42 173.7 129 67.4
AUR62025440 Chenopodium quinoa HOM05D007042 ORTHO05D008441 1.2e-41 173.3 127 65.4
Eucgr.H04779 Eucalyptus grandis HOM05D007042 ORTHO05D008441 2.0e-41 172.6 127 69.3
PGR031G2106 Punica granatum HOM05D007042 ORTHO05D008441 2.0e-41 172.6 128 69.5
Aqoxy5G00144 Aquilegia oxysepala HOM05D007042 ORTHO05D008441 3.5e-41 171.8 129 65.9
Solyc04g011530.3 Solanum lycopersicum HOM05D007042 ORTHO05D008441 3.5e-41 171.8 127 70.1
Cc02_g07760 Coffea canephora HOM05D007042 ORTHO05D008441 4.5e-41 171.4 135 68.9
HanXRQChr15g0468211 Helianthus annuus HOM05D007042 ORTHO05D008441 4.5e-41 171.4 129 65.1
Lj1A74G98 Lonicera japonica HOM05D007042 ORTHO05D008441 4.5e-41 171.4 126 66.7
Sopen04g005710 Solanum pennellii HOM05D007042 ORTHO05D008441 7.7e-41 170.6 127 69.3
PGSC0003DMG400027743 Solanum tuberosum HOM05D007042 ORTHO05D008441 7.7e-41 170.6 127 69.3
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 1.3e-40 169.9 107 76.6
Lsat_1_v5_gn_9_11480 Lactuca sativa HOM05D007042 ORTHO05D008441 2.9e-40 168.7 130 65.4
Sc17g0002810 Simmondsia chinensis HOM05D007042 ORTHO05D008441 3.8e-40 168.3 108 74.1
Nitab4.5_0010166g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 5.0e-40 167.9 127 65.4
ClCG06G001410 Citrullus lanatus HOM05D007042 ORTHO05D008441 6.5e-40 167.5 109 72.5
AL3G53360 Arabidopsis lyrata HOM05D007042 ORTHO05D008441 1.1e-39 166.8 127 70.9
Thhalv10002102m.g Eutrema salsugineum HOM05D007042 ORTHO05D008441 1.5e-39 166.4 127 68.5
Sp3g33630 Schrenkiella parvula HOM05D007042 ORTHO05D008441 1.5e-39 166.4 127 66.9
CARHR110910 Cardamine hirsuta HOM05D007042 ORTHO05D008441 3.2e-39 165.2 127 66.9
FAN15G2210 Fragaria x ananassa HOM05D007042 ORTHO05D008441 4.2e-39 164.9 110 69.1
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 4.2e-39 164.9 110 69.1
Nitab4.5_0013552g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 5.5e-39 164.5 128 67.2
ECA247G0849 Erigeron canadensis HOM05D007042 ORTHO05D008441 9.4e-39 163.7 126 65.1
SalBow3G0444 Salvia bowleyana HOM05D007042 ORTHO05D008441 9.4e-39 163.7 135 65.2
SGA_v2.0_scaffold94G28473 Striga asiatica HOM05D007042 ORTHO05D008441 1.2e-38 163.3 128 67.2
Aa31LG8G17370 Aethionema arabicum HOM05D007042 ORTHO05D008441 1.6e-38 162.9 129 65.1
Cfa002484 Carpinus fangiana HOM05D007042 ORTHO05D008441 2.1e-38 162.5 101 77.2
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 2.1e-38 162.5 112 67.9
BcaB03g16831 Brassica carinata HOM05D007042 ORTHO05D008441 4.7e-38 161.4 128 66.4
Rhsim01G0260600 Rhododendron simsii HOM05D007042 ORTHO05D008441 4.7e-38 161.4 105 73.3
AUR62008799 Chenopodium quinoa HOM05D007042 ORTHO05D008441 6.1e-38 161.0 105 70.5
Carub.0003s3477 Capsella rubella HOM05D007042 ORTHO05D008441 8.0e-38 160.6 127 66.1
Migut.F00782 Erythranthe guttata HOM05D007042 ORTHO05D008441 1.4e-37 159.8 127 63.8
AT2G20390 Arabidopsis thaliana HOM05D007042 ORTHO05D008441 1.8e-37 159.5 127 66.9
A07p00340 Brassica napus HOM05D007042 ORTHO05D008441 4.0e-37 158.3 128 64.8
BraA07t27825Z Brassica rapa HOM05D007042 ORTHO05D008441 4.0e-37 158.3 95 80.0
BcaC06g36726 Brassica carinata HOM05D007042 ORTHO05D008441 1.2e-36 156.8 127 64.6
C07p00700 Brassica napus HOM05D007042 ORTHO05D008441 1.2e-36 156.8 127 64.6
BolC7t40512H Brassica oleracea HOM05D007042 ORTHO05D008441 1.2e-36 156.8 127 64.6
ATR0787G115 Amborella trichopoda HOM05D007042 ORTHO05D008441 2.6e-36 155.6 122 62.3
CDE06G0115 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 3.4e-36 155.2 99 71.7
FAN27G0500 Fragaria x ananassa HOM05D007042 ORTHO05D008441 2.2e-35 152.5 96 74.0
PSO170G0149 Papaver somniferum HOM05D007042 ORTHO05D008441 1.1e-34 150.2 128 60.9
PSO063G2627 Papaver somniferum HOM05D007042 ORTHO05D008441 1.4e-34 149.8 126 61.9
Peaxi162Scf00760g00324 Petunia axillaris HOM05D007042 ORTHO05D008441 1.8e-34 149.4 90 78.9
QL09p041460 Quercus lobata HOM05D007042 ORTHO05D008441 2.4e-34 149.1 231 42.9
CDE04G2760 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 4.1e-34 148.3 93 73.1
Actinidia27524 Actinidia chinensis HOM05D007042 ORTHO05D008441 1.6e-33 146.4 138 59.4
SHI26738 Sapria himalayana HOM05D007042 ORTHO05D008441 4.5e-33 144.8 111 64.9
Os02g0754800 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 3.8e-32 141.7 95 67.4
HPP92_014817 Vanilla planifolia HOM05D007042 ORTHO05D008441 1.5e-31 139.8 93 65.6
Actinidia23697 Actinidia chinensis HOM05D007042 ORTHO05D008441 1.2e-28 130.2 130 56.9
SEGI_30132 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 2.0e-28 129.4 131 48.1
Zm00001eb307520 Zea mays HOM05D007042 ORTHO05D008441 2.8e-27 125.6 101 55.4
Zm00001eb088930 Zea mays HOM05D007042 ORTHO05D008441 1.6e-25 119.8 127 47.2
AagrBONN_evm.TU.Sc2ySwM_228.1144 Anthoceros agrestis HOM05D007042 ORTHO05D008441 4.7e-22 108.2 96 57.3
Os04g0129600 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 4.6e-17 91.7 62 64.5
Mapoly0078s0039 Marchantia polymorpha HOM05D007042 ORTHO05D008441 1.5e-15 86.7 116 45.7
Potri.014G193150 Populus trichocarpa HOM05D007042 ORTHO05D008441 9.5e-15 84.0 64 67.2
SHI06358 Sapria himalayana HOM05D007042 ORTHO05D008441 4.0e-13 78.6 59 62.7
SMO116G0088 Selaginella moellendorffii HOM05D001526 ORTHO05D008441 8.9e-13 77.4 83 48.2
SEGI_30900 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 8.9e-13 77.4 54 59.3
Pp3c18_10950 Physcomitrium patens HOM05D007042 ORTHO05D008441 4.4e-12 75.1 93 40.9
Ah.02g120930 Amaranthus hybridus HOM05D055707 ORTHO05D008441 4.7e-06 55.1 43 53.5


User provided reference genes

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