Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20053 Trifolium pratense HOM05D007706 ORTHO05D009593 2.9e-146 522.3 354 100.0
Medtr7g098450 Medicago truncatula HOM05D007706 ORTHO05D009593 7.4e-94 348.2 373 79.4
TPR.G30860 Trifolium pratense HOM05D003225 ORTHO05D003818 7.7e-91 338.2 372 75.3
Ca_08742_v3 Cicer arietinum L. HOM05D007706 ORTHO05D009593 7.9e-88 328.2 368 74.2
Ca_08762_v3 Cicer arietinum L. HOM05D003225 ORTHO05D009593 4.4e-86 322.4 365 72.9
Psat3g053960 Pisum sativum HOM05D007706 ORTHO05D009593 8.2e-85 318.2 372 74.7
Psat3g051920 Pisum sativum HOM05D007706 ORTHO05D009593 5.5e-81 305.4 365 74.2
Ca_30216_v3 Cicer arietinum L. HOM05D003225 ORTHO05D003818 9.4e-81 304.7 331 75.2
Medtr7g099260 Medicago truncatula HOM05D007706 ORTHO05D009593 4.2e-73 279.3 374 71.4
Glyma.03G167200 Glycine max HOM05D007706 ORTHO05D009593 2.3e-71 273.5 275 62.9
Glyma.19G168300 Glycine max HOM05D007706 ORTHO05D009593 1.1e-68 264.6 276 61.6
Lj1g0013336 Lotus japonicus HOM05D007706 ORTHO05D009593 7.2e-65 251.9 288 58.3
VMungo1383G0992 Vigna mungo HOM05D007706 ORTHO05D009593 4.1e-60 236.1 286 58.4
arahy.Tifrunner.gnm1.ann1.NJ5037 Arachis hypogaea HOM05D007706 ORTHO05D009593 9.1e-60 235.0 286 56.3
arahy.Tifrunner.gnm1.ann1.S77KHM Arachis hypogaea HOM05D007706 ORTHO05D009593 1.6e-59 234.2 286 57.7
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 1.6e-56 224.2 286 55.9
Lalb_Chr20g0113631 Lupinus albus HOM05D007706 ORTHO05D009593 1.6e-48 197.6 288 51.0
Potri.002G256900 Populus trichocarpa HOM05D007706 ORTHO05D009593 3.6e-40 169.9 297 45.1
Duzib138G1124 Durio zibethinus HOM05D007706 ORTHO05D009593 6.8e-39 165.6 304 43.1
Haze_24704 Corylus avellana HOM05D007706 ORTHO05D009593 1.4e-36 157.9 294 43.5
Cfa002482 Carpinus fangiana HOM05D007706 ORTHO05D009593 2.4e-36 157.1 293 43.3
Thecc.01G250700 Theobroma cacao HOM05D007706 ORTHO05D009593 9.2e-36 155.2 303 42.6
PGR031G0475 Punica granatum HOM05D007706 ORTHO05D009593 1.2e-35 154.8 272 44.9
Duzib133G1528 Durio zibethinus HOM05D007706 ORTHO05D009593 2.3e-34 150.6 304 41.8
QL09p041349 Quercus lobata HOM05D007706 ORTHO05D009593 5.1e-34 149.4 290 40.3
Sabra02G0195300 Salix brachista HOM05D007706 ORTHO05D009593 5.1e-34 149.4 292 39.4
MD05G1189100 Malus domestica HOM05D007706 ORTHO05D009593 3.3e-33 146.7 286 39.9
FAN27G2030 Fragaria x ananassa HOM05D007706 ORTHO05D009593 7.3e-33 145.6 274 42.7
ECA236G0985 Erigeron canadensis HOM05D007706 ORTHO05D009593 3.6e-32 143.3 273 42.5
Rhsim13G0040100 Rhododendron simsii HOM05D007706 ORTHO05D009593 6.8e-31 139.0 295 42.0
PGSC0003DMG400008584 Solanum tuberosum HOM05D007706 ORTHO05D009593 8.3e-29 132.1 278 40.3
Prupe.8G215700 Prunus persica HOM05D007706 ORTHO05D009593 5.4e-28 129.4 283 38.9
Solyc09g064630.3 Solanum lycopersicum HOM05D007706 ORTHO05D009593 7.1e-28 129.0 277 40.1
CiPaw.04G190500 Carya illinoinensis HOM05D007706 ORTHO05D009593 9.2e-28 128.6 288 39.6
Gohir.D07G210400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 1.2e-27 128.3 303 39.9
Sopen09g025790 Solanum pennellii HOM05D007706 ORTHO05D009593 2.1e-27 127.5 277 40.1
TWI12G0795 Tripterygium wilfordii HOM05D007706 ORTHO05D009593 2.1e-27 127.5 282 40.1
Gohir.A07G204400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 2.7e-27 127.1 295 39.3
Manes.12G037850 Manihot esculenta HOM05D007706 ORTHO05D009593 3.5e-27 126.7 287 43.2
RcHm_v2.0_Chr6g0286691 Rosa chinensis HOM05D007706 ORTHO05D009593 7.8e-27 125.6 283 39.9
FvH4_2g20530 Fragaria vesca HOM05D007706 ORTHO05D009593 1.7e-26 124.4 274 41.2
FAN24G1454 Fragaria x ananassa HOM05D007706 ORTHO05D009593 1.7e-26 124.4 274 41.2
Eucgr.A01320 Eucalyptus grandis HOM05D007706 ORTHO05D009593 2.3e-26 124.0 300 40.7
Lsat_1_v5_gn_8_92000 Lactuca sativa HOM05D007706 ORTHO05D009593 5.1e-26 122.9 266 40.2
FAN15G0362 Fragaria x ananassa HOM05D007706 ORTHO05D009593 6.6e-26 122.5 278 41.4
Gorai.001G237800 Gossypium raimondii HOM05D007706 ORTHO05D009593 6.6e-26 122.5 297 38.7
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 6.6e-26 122.5 284 39.1
CSS0048547 Camellia sinensis var. sinensis HOM05D007706 ORTHO05D009593 8.6e-26 122.1 300 37.7
Ciclev10020687m.g Citrus clementina HOM05D007706 ORTHO05D009593 1.1e-25 121.7 284 41.2
Dinv16399 Davidia involucrata HOM05D007706 ORTHO05D009593 1.9e-25 120.9 303 38.3
Nitab4.5_0007992g0040 Nicotiana tabacum HOM05D007706 ORTHO05D009593 1.2e-24 118.2 270 37.8
Peaxi162Scf00043g02924 Petunia axillaris HOM05D007706 ORTHO05D009593 2.8e-24 117.1 247 40.5
Cc01_g17810 Coffea canephora HOM05D007706 ORTHO05D009593 3.1e-23 113.6 282 37.9
HanXRQChr04g0108691 Helianthus annuus HOM05D007706 ORTHO05D009593 2.6e-22 110.5 276 39.5
TAR362G1069 Trochodendron aralioides HOM05D007706 ORTHO05D009593 2.6e-22 110.5 294 38.8
SalBow4G1824 Salvia bowleyana HOM05D007706 ORTHO05D009593 5.8e-22 109.4 279 36.9
Ah.15g092610 Amaranthus hybridus HOM05D007706 ORTHO05D009593 1.7e-21 107.8 278 40.6
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 1.7e-21 107.8 291 37.1
CiPaw.03G270700 Carya illinoinensis HOM05D007706 ORTHO05D009593 1.7e-21 107.8 277 35.0
vmacro02710 Vaccinium macrocarpon HOM05D007706 ORTHO05D009593 2.2e-21 107.5 279 36.6
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 3.8e-21 106.7 287 39.4
AUR62008796 Chenopodium quinoa HOM05D007706 ORTHO05D009593 8.4e-21 105.5 269 36.4
Hma1.2p1_1930F.1_g307940 Hydrangea macrophylla HOM05D007706 ORTHO05D009593 1.9e-20 104.4 298 36.2
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 2.4e-20 104.0 277 38.3
Lj2C1142T11 Lonicera japonica HOM05D007706 ORTHO05D009593 1.2e-19 101.7 291 37.1
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 2.7e-19 100.5 291 33.3
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 7.8e-19 99.0 279 34.4
Dinv34676 Davidia involucrata HOM05D007706 ORTHO05D009593 1.0e-18 98.6 297 35.4
Nn1g02965 Nelumbo nucifera HOM05D007706 ORTHO05D009593 1.0e-18 98.6 305 35.4
PSO675G7213 Papaver somniferum HOM05D007706 ORTHO05D009593 8.7e-18 95.5 276 32.6
Migut.N02230 Erythranthe guttata HOM05D007706 ORTHO05D009593 4.3e-17 93.2 274 35.8
Lalb_Chr01g0019491 Lupinus albus HOM05D007706 ORTHO05D009593 4.3e-17 93.2 109 56.0
MBI07_g23229_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 1.2e-16 91.7 288 37.2
Cpa.g.sc87.26 Carica papaya HOM05D007706 ORTHO05D009593 6.2e-16 89.4 310 31.3
CsaV3_6G007370 Cucumis sativus L. HOM05D007706 ORTHO05D009593 8.1e-16 89.0 288 36.1
MBI10_g26041_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 2.4e-15 87.4 272 31.2
Sopen12g010960 Solanum pennellii HOM05D000004 ORTHO05D009593 2.4e-15 87.4 143 46.2
SGA_v2.0_scaffold1G00652 Striga asiatica HOM05D007706 ORTHO05D009593 9.0e-15 85.5 274 33.2
CANSAT01G1705 Cannabis sativa HOM05D007706 ORTHO05D009593 2.0e-14 84.3 282 34.8
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 1.3e-13 81.6 293 34.8
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 3.8e-13 80.1 293 34.8
SEGI_40436 Sequoiadendron giganteum HOM05D052464 ORTHO05D009593 4.2e-12 76.6 285 28.8
MSTRG.18353 Avicennia marina HOM05D007706 ORTHO05D009593 9.3e-12 75.5 298 31.9
MELO3C022390.2 Cucumis melo HOM05D007706 ORTHO05D009593 9.3e-12 75.5 280 35.4
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 7.8e-11 72.4 115 43.5
CDE05G1228 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 1.0e-10 72.0 209 32.1
Nitab4.5_0000845g0230 Nicotiana tabacum HOM05D007706 ORTHO05D009593 1.3e-10 71.6 82 54.9
HPP92_022478 Vanilla planifolia HOM05D007706 ORTHO05D009593 2.3e-10 70.9 264 33.0
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 5.1e-10 69.7 301 31.6
SalBow7G0697 Salvia bowleyana HOM05D007706 ORTHO05D009593 5.1e-10 69.7 264 33.3
Haze_11463 Corylus avellana HOM05D006910 ORTHO05D008937 1.5e-09 68.2 284 32.4
Os03g0140700 Oryza sativa ssp. japonica HOM05D007706 ORTHO05D009593 2.5e-09 67.4 265 32.8
AUR62025443 Chenopodium quinoa HOM05D006910 ORTHO05D008937 9.6e-09 65.5 75 48.0
PSO675G2181 Papaver somniferum HOM05D007706 ORTHO05D009593 9.6e-09 65.5 231 29.4
COL.COLO4_10568 Corchorus olitorius HOM05D007706 ORTHO05D009593 1.3e-08 65.1 48 66.7
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 2.1e-08 64.3 321 32.1
Atru.chr4.1910 Acer truncatum HOM05D006910 ORTHO05D008937 2.8e-08 63.9 288 30.9
Gohir.A10G107300 Gossypium hirsutum HOM05D006910 ORTHO05D008937 2.8e-08 63.9 290 32.1
Sabra08G0131500 Salix brachista HOM05D006910 ORTHO05D008937 2.8e-08 63.9 300 31.7
Gorai.011G179800 Gossypium raimondii HOM05D006910 ORTHO05D008937 3.6e-08 63.5 293 31.4
Gohir.D10G160000 Gossypium hirsutum HOM05D006910 ORTHO05D008937 4.8e-08 63.2 279 30.5
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 6.2e-08 62.8 277 33.9
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 1.1e-07 62.0 46 67.4
Aa31LG1G14000 Aethionema arabicum HOM05D001903 ORTHO05D001847 1.4e-07 61.6 261 29.5
Peaxi162Scf00319g00521 Petunia axillaris HOM05D006910 ORTHO05D008937 1.8e-07 61.2 284 30.6
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 2.4e-07 60.8 284 32.0
QL06p021124 Quercus lobata HOM05D006910 ORTHO05D008937 6.9e-07 59.3 94 36.2
CANSAT78G1020 Cannabis sativa HOM05D006910 ORTHO05D008937 9.0e-07 58.9 301 29.2
Actinidia30127 Actinidia chinensis HOM05D007706 ORTHO05D009593 3.4e-06 57.0 75 49.3
Dinv27116 Davidia involucrata HOM05D006910 ORTHO05D008937 5.8e-06 56.2 76 50.0
Sed0022884 Sechium edule HOM05D007706 ORTHO05D009593 5.8e-06 56.2 196 34.2
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 7.6e-06 55.8 78 47.4
ClCG06G001430 Citrullus lanatus HOM05D007706 ORTHO05D009593 7.6e-06 55.8 283 29.7
Oeu011215.1 Olea europaea HOM05D006910 ORTHO05D008937 7.6e-06 55.8 80 42.5


User provided reference genes

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