Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20009 Trifolium pratense HOM05D008036 ORTHO05D000174 1.3e-70 269.6 135 100.0
TPR.G402 Trifolium pratense HOM05D008036 ORTHO05D000174 5.4e-37 157.9 89 84.3
TPR.G25065 Trifolium pratense HOM05D008036 ORTHO05D000174 9.2e-37 157.1 85 88.2
TPR.G40259 Trifolium pratense HOM05D008036 ORTHO05D000174 2.3e-35 152.5 82 90.2
TPR.G13367 Trifolium pratense HOM05D008036 ORTHO05D000174 3.8e-22 108.6 104 52.9
Medtr1g105785 Medicago truncatula HOM05D008036 ORTHO05D000174 6.4e-22 107.8 98 55.1
Medtr1g051235 Medicago truncatula HOM05D008036 ORTHO05D008317 8.7e-19 97.4 114 46.5
Medtr6g073570 Medicago truncatula HOM05D008036 ORTHO05D000174 8.7e-19 97.4 109 46.8
Medtr7g045450 Medicago truncatula HOM05D008036 ORTHO05D000174 8.7e-19 97.4 109 46.8
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 8.7e-19 97.4 97 52.6
TPR.G21729 Trifolium pratense HOM05D003813 ORTHO05D004557 1.1e-18 97.1 98 49.0
Medtr8g465040 Medicago truncatula HOM05D008036 ORTHO05D000174 3.3e-18 95.5 98 48.0
Medtr3g452170 Medicago truncatula HOM05D008036 ORTHO05D000174 5.6e-18 94.7 107 43.0
Medtr7g051400 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-17 93.6 91 52.7
Medtr7g110100 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-17 93.6 107 43.0
Medtr7g039300 Medicago truncatula HOM05D008036 ORTHO05D000174 2.1e-17 92.8 98 46.9
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 2.1e-17 92.8 97 49.5
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 2.1e-17 92.8 97 49.5
Medtr1g023370 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
Medtr2g005490 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
Medtr2g007410 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
Medtr2g010570 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
Medtr3g031190 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
Medtr5g030110 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
Medtr5g045850 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 94 50.0
Medtr5g056290 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
Medtr5g081190 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
Medtr5g091480 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
Medtr6g087820 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
Medtr7g024060 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
Medtr8g005940 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
Medtr8g446640 Medicago truncatula HOM05D008036 ORTHO05D000174 4.8e-17 91.7 109 45.9
TPR.G9555 Trifolium pratense HOM05D000096 ORTHO05D000045 4.8e-17 91.7 97 49.5
Medtr3g015660 Medicago truncatula HOM05D008036 ORTHO05D000174 6.2e-17 91.3 109 45.9
Medtr6g465570 Medicago truncatula HOM05D008036 ORTHO05D008317 1.4e-16 90.1 98 44.9
Medtr4g058660 Medicago truncatula HOM05D008036 ORTHO05D000174 3.1e-16 89.0 109 45.0
Medtr7g451880 Medicago truncatula HOM05D008036 ORTHO05D000174 3.1e-16 89.0 109 45.0
Medtr7g074180 Medicago truncatula HOM05D008036 ORTHO05D000174 1.5e-15 86.7 109 45.0
Medtr2g010270 Medicago truncatula HOM05D008036 ORTHO05D000174 3.4e-15 85.5 118 42.4
Medtr5g019960 Medicago truncatula HOM05D008036 ORTHO05D000174 5.8e-15 84.7 97 47.4
Medtr1g110330 Medicago truncatula HOM05D008036 ORTHO05D000174 2.2e-14 82.8 90 45.6
Medtr7g051840 Medicago truncatula HOM05D008036 ORTHO05D000174 8.4e-14 80.9 94 45.7
Medtr1g011490 Medicago truncatula HOM05D008036 ORTHO05D000174 1.4e-13 80.1 97 43.3
Medtr1g082860 Medicago truncatula HOM05D008036 ORTHO05D000174 1.4e-13 80.1 97 43.3
Medtr4g017450 Medicago truncatula HOM05D008036 ORTHO05D000174 1.9e-13 79.7 79 49.4
TPR.G37330 Trifolium pratense HOM05D008036 ORTHO05D008317 4.2e-13 78.6 92 44.6
Medtr1g052715 Medicago truncatula HOM05D008036 ORTHO05D000174 5.5e-13 78.2 95 44.2
Medtr7g070110 Medicago truncatula HOM05D008036 ORTHO05D000174 1.2e-12 77.0 87 46.0
Glyma.08G241650 Glycine max HOM05D008036 ORTHO05D000174 6.7e-11 71.2 95 44.2
TPR.G9984 Trifolium pratense HOM05D005770 ORTHO05D006702 8.2e-09 64.3 58 51.7
Medtr7g096440 Medicago truncatula HOM05D000096 ORTHO05D000045 1.8e-08 63.2 96 36.5
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 3.4e-07 58.9 97 32.0
EL10Ac1g00284 Beta vulgaris HOM05D000353 ORTHO05D000174 1.7e-06 56.6 97 32.0
TPR.G26593 Trifolium pratense HOM05D002090 ORTHO05D001923 1.7e-06 56.6 81 38.3
Medtr3g007260 Medicago truncatula HOM05D008036 ORTHO05D000174 4.9e-06 55.1 96 37.5
Medtr0105s0080 Medicago truncatula HOM05D008036 ORTHO05D000174 6.5e-06 54.7 52 51.9


User provided reference genes

Program Settings