Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19962 Trifolium pratense HOM05D000233 ORTHO05D000020 2.7e-73 278.5 133 100.0
Medtr2g014300 Medicago truncatula HOM05D000233 ORTHO05D000020 2.6e-47 192.2 133 77.4
Psat1g203400 Pisum sativum HOM05D000233 ORTHO05D000020 1.3e-46 189.9 133 75.9
Ca_00354_v3 Cicer arietinum L. HOM05D000233 ORTHO05D000020 2.9e-43 178.7 133 72.9
Lj6g0002421 Lotus japonicus HOM05D000233 ORTHO05D000020 8.2e-38 160.6 136 68.4
VMungo0540G0264 Vigna mungo HOM05D000233 ORTHO05D000020 5.9e-36 154.5 133 64.7
Phvul.006G183200 Phaseolus vulgaris HOM05D000233 ORTHO05D000020 7.7e-36 154.1 133 63.2
Glyma.15G077000 Glycine max HOM05D000233 ORTHO05D000020 5.5e-34 147.9 133 60.9
Glyma.13G236600 Glycine max HOM05D000233 ORTHO05D000020 4.7e-33 144.8 134 62.7
arahy.Tifrunner.gnm1.ann1.57AKVM Arachis hypogaea HOM05D000233 ORTHO05D000020 9.7e-31 137.1 160 55.0
arahy.Tifrunner.gnm1.ann1.ILN3K9 Arachis hypogaea HOM05D000233 ORTHO05D000020 1.1e-29 133.7 152 53.9
Potri.004G047500 Populus trichocarpa HOM05D000233 ORTHO05D000020 1.2e-28 130.2 141 56.0
CANSAT35G0645 Cannabis sativa HOM05D000233 ORTHO05D000020 3.8e-27 125.2 133 53.4
Prupe.4G051200 Prunus persica HOM05D000233 ORTHO05D000020 3.8e-27 125.2 139 55.4
Hma1.2p1_0208F.1_g088400 Hydrangea macrophylla HOM05D000233 ORTHO05D000020 1.5e-26 123.2 133 56.4
Sabra04G0029700 Salix brachista HOM05D000233 ORTHO05D000020 1.5e-26 123.2 143 51.7
FAN25G2471 Fragaria x ananassa HOM05D000233 ORTHO05D000020 3.2e-26 122.1 135 56.3
Cfa000514 Carpinus fangiana HOM05D000233 ORTHO05D000020 1.2e-25 120.2 138 55.8
Lalb_Chr20g0121631 Lupinus albus HOM05D000233 ORTHO05D000020 2.1e-25 119.4 134 55.2
Duzib192G0130 Durio zibethinus HOM05D000233 ORTHO05D000020 2.7e-25 119.0 139 51.1
QL05p041994 Quercus lobata HOM05D000233 ORTHO05D000020 2.7e-25 119.0 152 49.3
Haze_06397 Corylus avellana HOM05D000233 ORTHO05D000020 4.7e-25 118.2 138 55.1
FAN11G1003 Fragaria x ananassa HOM05D000233 ORTHO05D000020 6.1e-25 117.9 133 55.6
FAN21G0609 Fragaria x ananassa HOM05D000233 ORTHO05D000020 6.1e-25 117.9 132 55.3
FvH4_3g08790 Fragaria vesca HOM05D000233 ORTHO05D000020 8.0e-25 117.5 133 55.6
CiPaw.09G062600 Carya illinoinensis HOM05D000233 ORTHO05D000020 1.4e-24 116.7 134 56.0
Potri.011G056900 Populus trichocarpa HOM05D000233 ORTHO05D000020 1.4e-24 116.7 138 52.2
RcHm_v2.0_Chr5g0008971 Rosa chinensis HOM05D000233 ORTHO05D000020 1.4e-24 116.7 133 52.6
FAN16G3052 Fragaria x ananassa HOM05D000233 ORTHO05D000020 2.3e-24 115.9 139 51.8
Atru.chr10.1812 Acer truncatum HOM05D000233 ORTHO05D000020 1.5e-23 113.2 148 50.0
MD10G1290900 Malus domestica HOM05D000233 ORTHO05D000020 2.0e-23 112.8 143 51.0
Manes.16G030400 Manihot esculenta HOM05D000233 ORTHO05D000020 3.4e-23 112.1 134 52.2
FAN03G2934 Fragaria x ananassa HOM05D000233 ORTHO05D000020 7.5e-23 110.9 134 51.5
Ciclev10016982m.g Citrus clementina HOM05D000233 ORTHO05D000020 1.3e-22 110.2 138 50.0
DCAR_008019 Daucus carota HOM05D000233 ORTHO05D000020 3.7e-22 108.6 132 53.0
MD05G1311600 Malus domestica HOM05D000233 ORTHO05D000020 3.7e-22 108.6 142 50.0
CSS0010538 Camellia sinensis var. sinensis HOM05D000233 ORTHO05D000020 4.8e-22 108.2 132 48.5
Sabra11G0038700 Salix brachista HOM05D000233 ORTHO05D000020 4.8e-22 108.2 139 49.6
Migut.M01117 Erythranthe guttata HOM05D000233 ORTHO05D000020 6.3e-22 107.8 133 49.6
FAN10G3697 Fragaria x ananassa HOM05D000233 ORTHO05D000020 8.3e-22 107.5 135 51.1
Nitab4.5_0008414g0010 Nicotiana tabacum HOM05D000233 ORTHO05D000020 1.1e-21 107.1 141 51.8
Oeu064796.1 Olea europaea HOM05D000233 ORTHO05D000020 1.4e-21 106.7 139 48.2
CiPaw.10G051700 Carya illinoinensis HOM05D000233 ORTHO05D000020 1.8e-21 106.3 133 51.1
FAN06G2220 Fragaria x ananassa HOM05D000233 ORTHO05D000020 1.8e-21 106.3 135 50.4
Lj1P1202T49 Lonicera japonica HOM05D000233 ORTHO05D000020 3.1e-21 105.5 134 53.0
Manes.17G048200 Manihot esculenta HOM05D000233 ORTHO05D000020 3.1e-21 105.5 133 47.4
FvH4_7g26410 Fragaria vesca HOM05D000233 ORTHO05D000020 4.1e-21 105.1 136 50.0
Oeu027695.1 Olea europaea HOM05D000233 ORTHO05D000020 4.1e-21 105.1 136 51.5
FAN01G1126 Fragaria x ananassa HOM05D000233 ORTHO05D000020 9.1e-21 104.0 135 49.6
Cc02_g13680 Coffea canephora HOM05D000233 ORTHO05D000020 1.2e-20 103.6 134 49.3
DCAR_004054 Daucus carota HOM05D000233 ORTHO05D000020 1.2e-20 103.6 132 53.0
Lalb_Chr18g0059441 Lupinus albus HOM05D000233 ORTHO05D000020 1.6e-20 103.2 134 50.7
Cpa.g.sc27.18 Carica papaya HOM05D000233 ORTHO05D000020 2.0e-20 102.8 139 46.8
MSTRG.15859 Avicennia marina HOM05D000233 ORTHO05D000020 2.7e-20 102.4 133 48.1
TWI38G1737 Tripterygium wilfordii HOM05D000233 ORTHO05D000020 4.5e-20 101.7 134 47.0
arahy.Tifrunner.gnm1.ann1.4AG551 Arachis hypogaea HOM05D000233 ORTHO05D000020 5.9e-20 101.3 133 46.6
Duzib235G1008 Durio zibethinus HOM05D000233 ORTHO05D000020 1.0e-19 100.5 138 47.8
PGSC0003DMG400029713 Solanum tuberosum HOM05D000233 ORTHO05D000020 1.0e-19 100.5 140 47.1
TWI63G1633 Tripterygium wilfordii HOM05D000233 ORTHO05D000020 1.3e-19 100.1 141 48.2
TWI38G1117 Tripterygium wilfordii HOM05D000233 ORTHO05D000020 1.7e-19 99.8 133 48.9
Gohir.D10G027800 Gossypium hirsutum HOM05D000233 ORTHO05D000020 2.9e-19 99.0 141 47.5
Gorai.011G029700 Gossypium raimondii HOM05D000233 ORTHO05D000020 2.9e-19 99.0 141 47.5
Oeu014771.1 Olea europaea HOM05D000233 ORTHO05D000020 5.0e-19 98.2 142 43.7
Sopen02g022700 Solanum pennellii HOM05D000233 ORTHO05D000020 6.6e-19 97.8 140 45.7
SGA_v2.0_scaffold100G29706 Striga asiatica HOM05D000233 ORTHO05D000020 6.6e-19 97.8 134 44.8
Gohir.A10G027400 Gossypium hirsutum HOM05D000233 ORTHO05D000020 1.1e-18 97.1 141 46.8
SGA_v2.0_scaffold22G09677 Striga asiatica HOM05D000233 ORTHO05D000020 1.9e-18 96.3 133 45.9
Peaxi162Scf00243g00102 Petunia axillaris HOM05D000233 ORTHO05D000020 2.5e-18 95.9 137 48.2
TAR626G1860 Trochodendron aralioides HOM05D000233 ORTHO05D000020 2.5e-18 95.9 134 51.5
ClCG03G008060 Citrullus lanatus HOM05D000233 ORTHO05D000020 4.2e-18 95.1 140 44.3
Oeu012148.1 Olea europaea HOM05D000233 ORTHO05D000020 5.5e-18 94.7 134 45.5
Rhsim02G0133200 Rhododendron simsii HOM05D000233 ORTHO05D000020 5.5e-18 94.7 134 46.3
TAR627G0897 Trochodendron aralioides HOM05D000233 ORTHO05D000020 2.1e-17 92.8 145 48.3
Thecc.06G182900 Theobroma cacao HOM05D000233 ORTHO05D000020 8.0e-17 90.9 144 42.4
TAR629G2118 Trochodendron aralioides HOM05D000233 ORTHO05D000020 8.0e-17 90.9 140 47.9
Peaxi162Scf00461g00112 Petunia axillaris HOM05D000233 ORTHO05D000020 1.8e-16 89.7 133 42.1
Nn1g06447 Nelumbo nucifera HOM05D000233 ORTHO05D000020 2.3e-16 89.4 131 48.9
SHI37024 Sapria himalayana HOM05D000233 ORTHO05D000020 2.3e-16 89.4 135 46.7
MELO3C002623.2 Cucumis melo HOM05D000233 ORTHO05D000020 2.6e-15 85.9 145 39.3
Dinv40590 Davidia involucrata HOM05D000233 ORTHO05D000020 3.4e-15 85.5 112 51.8
ECA236G0966 Erigeron canadensis HOM05D000233 ORTHO05D000020 3.4e-15 85.5 137 41.6
PGR042G3542 Punica granatum HOM05D000233 ORTHO05D000020 3.4e-15 85.5 146 41.8
CSS0040091 Camellia sinensis var. sinensis HOM05D000233 ORTHO05D000020 4.4e-15 85.1 132 47.7
Lsat_1_v5_gn_7_20840 Lactuca sativa HOM05D000233 ORTHO05D000020 7.5e-15 84.3 142 39.4
HanXRQChr16g0517641 Helianthus annuus HOM05D000233 ORTHO05D000020 4.9e-14 81.6 144 40.3
Lsat_1_v5_gn_4_52080 Lactuca sativa HOM05D000233 ORTHO05D000020 8.3e-14 80.9 147 42.2
MBI02_g32394_MAGBIO Magnolia biondii HOM05D000233 ORTHO05D000020 3.2e-13 79.0 131 46.6
PSO675G2089 Papaver somniferum HOM05D000233 ORTHO05D000020 4.1e-13 78.6 174 38.5
Aa31LG6G10400 Aethionema arabicum HOM05D000233 ORTHO05D000020 9.2e-13 77.4 142 42.3
PSO541G2091 Papaver somniferum HOM05D000233 ORTHO05D000020 9.2e-13 77.4 174 38.5
Dinv17340 Davidia involucrata HOM05D000233 ORTHO05D000020 2.7e-12 75.9 88 56.8
Actinidia26137 Actinidia chinensis HOM05D000233 ORTHO05D000020 7.8e-12 74.3 118 42.4
Carub.0001s2682 Capsella rubella HOM05D000233 ORTHO05D000020 1.0e-11 73.9 157 39.5
THA.LOC104820561 Tarenaya hassleriana HOM05D000233 ORTHO05D000020 1.0e-11 73.9 145 41.4
A08p25660 Brassica napus HOM05D000233 ORTHO05D000020 1.3e-11 73.6 156 40.4
C03p75030 Brassica napus HOM05D000233 ORTHO05D000020 1.3e-11 73.6 158 39.2
BolC3t19757H Brassica oleracea HOM05D000233 ORTHO05D000020 1.3e-11 73.6 158 39.2
BraA08t34516Z Brassica rapa HOM05D000233 ORTHO05D000020 1.3e-11 73.6 156 40.4
Sp1g24600 Schrenkiella parvula HOM05D000233 ORTHO05D000020 1.7e-11 73.2 154 40.3
AL1G41970 Arabidopsis lyrata HOM05D000233 ORTHO05D000020 3.9e-11 72.0 149 39.6
BcaB03g13932 Brassica carinata HOM05D000233 ORTHO05D000020 3.9e-11 72.0 150 38.7
Sed0016095 Sechium edule HOM05D000233 ORTHO05D000020 5.0e-11 71.6 133 39.8
BcaC01g00039 Brassica carinata HOM05D000233 ORTHO05D000020 6.6e-11 71.2 164 39.0
CsaV3_1G012490 Cucumis sativus L. HOM05D000233 ORTHO05D000020 6.6e-11 71.2 138 38.4
CDE01G0272 Ceratophyllum demersum HOM05D000233 ORTHO05D000020 8.6e-11 70.9 129 36.4
unitig_27.g24972 Utricularia gibba HOM05D000233 ORTHO05D000020 8.6e-11 70.9 133 38.3
HanXRQChr03g0062431 Helianthus annuus HOM05D000233 ORTHO05D000020 1.1e-10 70.5 134 39.6
CARHR027850 Cardamine hirsuta HOM05D000233 ORTHO05D000020 1.5e-10 70.1 156 38.5
Actinidia07595 Actinidia chinensis HOM05D000233 ORTHO05D000020 1.9e-10 69.7 120 42.5
AT1G28360 Arabidopsis thaliana HOM05D000233 ORTHO05D000020 1.9e-10 69.7 155 38.1
BolC5t31441H Brassica oleracea HOM05D000233 ORTHO05D000020 2.5e-10 69.3 144 38.9
BraA07t28918Z Brassica rapa HOM05D000233 ORTHO05D000020 2.5e-10 69.3 147 38.8
A07p11250 Brassica napus HOM05D000233 ORTHO05D000020 4.3e-10 68.6 147 38.8
BolC7t42204H Brassica oleracea HOM05D000233 ORTHO05D000020 4.3e-10 68.6 150 40.7
Nn1g04177 Nelumbo nucifera HOM05D000233 ORTHO05D000020 4.3e-10 68.6 129 41.1
Thhalv10009947m.g Eutrema salsugineum HOM05D000233 ORTHO05D000020 5.6e-10 68.2 159 39.0
BcaC05g26848 Brassica carinata HOM05D000233 ORTHO05D000020 1.2e-09 67.0 144 37.5
BcaC06g35357 Brassica carinata HOM05D000233 ORTHO05D000020 1.2e-09 67.0 156 35.9
A09p37700 Brassica napus HOM05D000233 ORTHO05D000020 1.2e-09 67.0 157 37.6
BraA09t39281Z Brassica rapa HOM05D000233 ORTHO05D000020 1.2e-09 67.0 157 37.6
C05p27280 Brassica napus HOM05D000233 ORTHO05D000020 3.6e-09 65.5 145 37.9
ECA234G0554 Erigeron canadensis HOM05D000233 ORTHO05D000020 3.6e-09 65.5 135 38.5
HanXRQChr04g0123821 Helianthus annuus HOM05D000233 ORTHO05D000020 3.6e-09 65.5 141 35.5
BcaB07g32453 Brassica carinata HOM05D000233 ORTHO05D000020 6.1e-09 64.7 141 38.3
SGA_v2.0_scaffold47G17720 Striga asiatica HOM05D000233 ORTHO05D000020 6.1e-09 64.7 73 52.1
Psat5g174320 Pisum sativum HOM05D000233 ORTHO05D000020 3.1e-08 62.4 151 32.5
MSTRG.14459 Avicennia marina HOM05D000233 ORTHO05D000020 4.0e-08 62.0 150 32.0
Actinidia05650 Actinidia chinensis HOM05D000233 ORTHO05D000020 4.4e-07 58.5 114 41.2
unitig_699.g19109 Utricularia gibba HOM05D000233 ORTHO05D000020 4.4e-07 58.5 84 45.2
EL10Ac8g20425 Beta vulgaris HOM05D000233 ORTHO05D000020 7.5e-07 57.8 136 34.6
Sed0018216 Sechium edule HOM05D000233 ORTHO05D000020 9.8e-07 57.4 133 36.1
CDE02G4713 Ceratophyllum demersum HOM05D000233 ORTHO05D000020 1.3e-06 57.0 134 36.6
ClCG02G018120 Citrullus lanatus HOM05D000233 ORTHO05D000020 1.3e-06 57.0 143 31.5
Sc17g0006030 Simmondsia chinensis HOM05D000233 ORTHO05D000020 1.3e-06 57.0 150 34.7
TPR.G32231 Trifolium pratense HOM05D000233 ORTHO05D000020 1.3e-06 57.0 148 32.4
Ca_20349_v3 Cicer arietinum L. HOM05D000233 ORTHO05D000020 1.7e-06 56.6 146 31.5
Sed0027602 Sechium edule HOM05D000233 ORTHO05D000020 1.7e-06 56.6 135 31.9
MELO3C019725.2 Cucumis melo HOM05D000233 ORTHO05D000020 2.2e-06 56.2 143 30.8
CsaV3_6G015510 Cucumis sativus L. HOM05D000233 ORTHO05D000020 2.2e-06 56.2 143 30.8
HPP92_003054 Vanilla planifolia HOM05D000233 ORTHO05D000020 2.2e-06 56.2 136 35.3
Actinidia16565 Actinidia chinensis HOM05D000233 ORTHO05D000020 2.9e-06 55.8 112 41.1
Oeu054307.1 Olea europaea HOM05D000233 ORTHO05D000020 2.9e-06 55.8 139 30.9
Oeu054308.1 Olea europaea HOM05D000233 ORTHO05D000020 2.9e-06 55.8 139 30.9
Oeu054309.1 Olea europaea HOM05D000233 ORTHO05D000020 2.9e-06 55.8 139 30.9
COL.COLO4_31431 Corchorus olitorius HOM05D000233 ORTHO05D000020 3.7e-06 55.5 31 71.0
Sed0008801 Sechium edule HOM05D000233 ORTHO05D000020 3.7e-06 55.5 147 33.3
Aqoxy1G02329 Aquilegia oxysepala HOM05D000233 ORTHO05D000020 8.3e-06 54.3 150 30.7


User provided reference genes

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