Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19958 Trifolium pratense HOM05D002799 ORTHO05D007076 2.1e-31 138.3 63 100.0
Dinv17267 Davidia involucrata HOM05D002799 ORTHO05D007076 1.1e-29 132.5 62 91.9
Lj3g0008833 Lotus japonicus HOM05D002799 ORTHO05D007076 2.5e-29 131.3 62 90.3
Ca_04931_v3 Cicer arietinum L. HOM05D002799 ORTHO05D007076 3.3e-29 131.0 62 90.3
Ca_29855_v3 Cicer arietinum L. HOM05D002799 ORTHO05D007076 3.3e-29 131.0 62 90.3
Sed0006194 Sechium edule HOM05D002799 ORTHO05D007076 3.3e-29 131.0 62 88.7
CsaV3_4G004510 Cucumis sativus L. HOM05D002799 ORTHO05D007076 4.3e-29 130.6 62 87.1
Medtr4g077510 Medicago truncatula HOM05D002799 ORTHO05D007076 4.3e-29 130.6 62 90.3
Prupe.2G323900 Prunus persica HOM05D002799 ORTHO05D007076 4.3e-29 130.6 62 90.3
CSS0010295 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D007076 5.6e-29 130.2 62 90.3
MELO3C017614.2 Cucumis melo HOM05D002799 ORTHO05D007076 7.4e-29 129.8 62 85.5
Phvul.011G021500 Phaseolus vulgaris HOM05D002799 ORTHO05D007076 7.4e-29 129.8 62 90.3
Psat7g171360 Pisum sativum HOM05D002799 ORTHO05D007076 7.4e-29 129.8 62 88.7
Gohir.A09G055000 Gossypium hirsutum HOM05D002799 ORTHO05D007076 9.6e-29 129.4 62 87.1
Gorai.006G053300 Gossypium raimondii HOM05D002799 ORTHO05D007076 9.6e-29 129.4 62 87.1
Potri.015G079500 Populus trichocarpa HOM05D002799 ORTHO05D007076 9.6e-29 129.4 62 87.1
TWI34G0554 Tripterygium wilfordii HOM05D002799 ORTHO05D007076 9.6e-29 129.4 62 90.3
vmacro06500 Vaccinium macrocarpon HOM05D002799 ORTHO05D007076 9.6e-29 129.4 62 90.3
Actinidia08737 Actinidia chinensis HOM05D002799 ORTHO05D007076 1.3e-28 129.0 62 88.7
Lj1C1032G6 Lonicera japonica HOM05D002799 ORTHO05D007076 1.3e-28 129.0 62 87.1
MD01G1233700 Malus domestica HOM05D002799 ORTHO05D007076 1.3e-28 129.0 62 85.5
VMungo1127G2112 Vigna mungo HOM05D002799 ORTHO05D007076 1.3e-28 129.0 62 88.7
ClCG07G017310 Citrullus lanatus HOM05D002799 ORTHO05D007076 1.6e-28 128.6 62 85.5
Aa31LG3G2760 Aethionema arabicum HOM05D002799 ORTHO05D007076 2.1e-28 128.3 62 87.1
arahy.Tifrunner.gnm1.ann1.IZ2599 Arachis hypogaea HOM05D002799 ORTHO05D007076 2.1e-28 128.3 61 90.2
arahy.Tifrunner.gnm1.ann1.ZMX436 Arachis hypogaea HOM05D002799 ORTHO05D007076 2.1e-28 128.3 61 90.2
BcaB08g34494 Brassica carinata HOM05D002799 ORTHO05D007076 2.1e-28 128.3 62 88.7
BcaC01g03181 Brassica carinata HOM05D002799 ORTHO05D007076 2.1e-28 128.3 62 88.7
A03p44540 Brassica napus HOM05D002799 ORTHO05D007076 2.1e-28 128.3 62 88.7
C03p55340 Brassica napus HOM05D002799 ORTHO05D007076 2.1e-28 128.3 62 88.7
BolC3t17806H Brassica oleracea HOM05D002799 ORTHO05D007076 2.1e-28 128.3 62 88.7
BraA03t13587Z Brassica rapa HOM05D002799 ORTHO05D007076 2.1e-28 128.3 62 88.7
CARHR102970 Cardamine hirsuta HOM05D002799 ORTHO05D007076 2.1e-28 128.3 62 88.7
CiPaw.05G237100 Carya illinoinensis HOM05D002799 ORTHO05D007076 2.1e-28 128.3 61 90.2
Sp3g23560 Schrenkiella parvula HOM05D002799 ORTHO05D007076 2.1e-28 128.3 62 88.7
Ciclev10001355m.g Citrus clementina HOM05D002799 ORTHO05D007076 2.8e-28 127.9 62 87.1
Thhalv10002559m.g Eutrema salsugineum HOM05D002799 ORTHO05D007076 2.8e-28 127.9 62 88.7
QL09p025824 Quercus lobata HOM05D002799 ORTHO05D007076 2.8e-28 127.9 62 87.1
AT2G04940 Arabidopsis thaliana HOM05D002799 ORTHO05D007076 3.7e-28 127.5 62 87.1
COL.COLO4_24619 Corchorus olitorius HOM05D002799 ORTHO05D007076 3.7e-28 127.5 62 85.5
TAR374G0973 Trochodendron aralioides HOM05D002799 ORTHO05D007076 4.8e-28 127.1 62 83.9
HPP92_015127 Vanilla planifolia HOM05D002799 ORTHO05D007076 4.8e-28 127.1 62 83.9
GSVIVG01024449001 Vitis vinifera HOM05D002799 ORTHO05D007076 4.8e-28 127.1 62 85.5
Atru.chr12.2008 Acer truncatum HOM05D002799 ORTHO05D007076 6.2e-28 126.7 62 83.9
AL3G42700 Arabidopsis lyrata HOM05D002799 ORTHO05D007076 6.2e-28 126.7 62 87.1
Duzib211G0014 Durio zibethinus HOM05D002799 ORTHO05D007076 6.2e-28 126.7 62 87.1
Cpa.g.sc67.53 Carica papaya HOM05D002799 ORTHO05D007076 1.4e-27 125.6 62 83.9
Lsat_1_v5_gn_8_3761 Lactuca sativa HOM05D002799 ORTHO05D007076 1.4e-27 125.6 62 83.9
Sabra15G0103700 Salix brachista HOM05D002799 ORTHO05D007076 1.4e-27 125.6 63 84.1
SalBow5G5430 Salvia bowleyana HOM05D002799 ORTHO05D007076 1.4e-27 125.6 62 85.5
Thecc.08G172500 Theobroma cacao HOM05D002799 ORTHO05D007076 1.4e-27 125.6 62 85.5
MSTRG.11401 Avicennia marina HOM05D002799 ORTHO05D007076 1.8e-27 125.2 62 83.9
EL10Ac3g05098 Beta vulgaris HOM05D002799 ORTHO05D007076 1.8e-27 125.2 61 85.2
Carub.0003s2662 Capsella rubella HOM05D002799 ORTHO05D007076 1.8e-27 125.2 62 87.1
AUR62028151 Chenopodium quinoa HOM05D002799 ORTHO05D007076 2.4e-27 124.8 61 85.2
Ah.13g072670 Amaranthus hybridus HOM05D002799 ORTHO05D007076 3.1e-27 124.4 61 85.2
Actinidia34299 Actinidia chinensis HOM05D002799 ORTHO05D007076 4.0e-27 124.0 62 87.1
Eucgr.K00095 Eucalyptus grandis HOM05D002799 ORTHO05D007076 4.0e-27 124.0 61 85.2
Zm00001eb071960 Zea mays HOM05D002799 ORTHO05D007076 4.0e-27 124.0 62 82.3
DCAR_009002 Daucus carota HOM05D002799 ORTHO05D007076 5.3e-27 123.6 62 87.1
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 5.3e-27 123.6 62 83.9
Glyma.12G019100 Glycine max HOM05D002799 ORTHO05D007076 5.3e-27 123.6 62 87.1
Gohir.D09G053900 Gossypium hirsutum HOM05D002799 ORTHO05D007076 5.3e-27 123.6 62 82.3
CANSAT21G1863 Cannabis sativa HOM05D002799 ORTHO05D007076 6.9e-27 123.2 61 85.2
FvH4_7g33590 Fragaria vesca HOM05D002799 ORTHO05D007076 6.9e-27 123.2 62 83.9
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 6.9e-27 123.2 62 83.9
FAN10G3482 Fragaria x ananassa HOM05D002799 ORTHO05D007076 6.9e-27 123.2 62 83.9
PSO782G0547 Papaver somniferum HOM05D002799 ORTHO05D007076 6.9e-27 123.2 62 79.0
RcHm_v2.0_Chr1g0383851 Rosa chinensis HOM05D002799 ORTHO05D007076 6.9e-27 123.2 62 83.9
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 9.0e-27 122.9 61 83.6
Cc03_g15080 Coffea canephora HOM05D002799 ORTHO05D007076 9.0e-27 122.9 62 85.5
CAN.G289.47 Capsicum annuum HOM05D002799 ORTHO05D007076 1.2e-26 122.5 61 86.9
Lalb_Chr03g0024441 Lupinus albus HOM05D002799 ORTHO05D007076 1.2e-26 122.5 62 83.9
Manes.08G164400 Manihot esculenta HOM05D002799 ORTHO05D007076 1.2e-26 122.5 62 85.5
PGR004G1694 Punica granatum HOM05D002799 ORTHO05D007076 1.5e-26 122.1 58 87.9
Solyc03g006460.4 Solanum lycopersicum HOM05D002799 ORTHO05D007076 2.6e-26 121.3 61 83.6
Sopen03g002460 Solanum pennellii HOM05D002799 ORTHO05D007076 2.6e-26 121.3 61 83.6
ECA233G3743 Erigeron canadensis HOM05D002799 ORTHO05D007076 3.4e-26 120.9 62 80.6
PSO063G7569 Papaver somniferum HOM05D002799 ORTHO05D007076 4.5e-26 120.6 62 77.4
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 5.8e-26 120.2 62 82.3
ATR0829G228 Amborella trichopoda HOM05D002799 ORTHO05D007076 7.6e-26 119.8 62 79.0
MBI04_g21139_MAGBIO Magnolia biondii HOM05D002799 ORTHO05D007076 7.6e-26 119.8 62 80.6
Aqoxy3G02040 Aquilegia oxysepala HOM05D002799 ORTHO05D007076 2.2e-25 118.2 62 79.0
Zm00001eb430250 Zea mays HOM05D002799 ORTHO05D007076 2.2e-25 118.2 62 77.4
AUR62005914 Chenopodium quinoa HOM05D002799 ORTHO05D007076 4.9e-25 117.1 61 78.7
Sc13g0010800 Simmondsia chinensis HOM05D002799 ORTHO05D007076 6.5e-25 116.7 62 80.6
Lj2A621G40 Lonicera japonica HOM05D002799 ORTHO05D007076 1.9e-24 115.2 62 80.6
Os02g0238500 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D007076 2.5e-24 114.8 62 79.0
Os04g0599400 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D007076 2.5e-24 114.8 62 79.0
HanXRQChr04g0105251 Helianthus annuus HOM05D002799 ORTHO05D007076 7.1e-24 113.2 62 77.4
PGSC0003DMG400012810 Solanum tuberosum HOM05D002799 ORTHO05D007076 7.1e-24 113.2 74 70.3
THA.LOC104815357 Tarenaya hassleriana HOM05D002799 ORTHO05D007076 3.5e-23 110.9 62 77.4
Nn1g02009 Nelumbo nucifera HOM05D002799 ORTHO05D007076 7.9e-23 109.8 56 80.4
Hma1.2p1_0758F.1_g213600 Hydrangea macrophylla HOM05D002799 ORTHO05D007076 1.8e-22 108.6 62 77.4
SEGI_10035 Sequoiadendron giganteum HOM05D002799 ORTHO05D007076 3.0e-22 107.8 62 75.8
Oeu014983.2 Olea europaea HOM05D002799 ORTHO05D007076 1.5e-21 105.5 62 72.6
Migut.I00118 Erythranthe guttata HOM05D002799 ORTHO05D007076 4.8e-20 100.5 62 67.7
MD07G1305800 Malus domestica HOM05D002799 ORTHO05D007076 4.8e-20 100.5 62 66.1
Mapoly0041s0072 Marchantia polymorpha HOM05D002799 ORTHO05D007076 1.1e-19 99.4 61 67.2
SMO196G0267 Selaginella moellendorffii HOM05D002799 ORTHO05D007076 1.1e-19 99.4 62 66.1
AagrBONN_evm.TU.Sc2ySwM_368.1885 Anthoceros agrestis HOM05D002799 ORTHO05D007076 1.5e-18 95.5 62 59.7
Pp3c5_23880 Physcomitrium patens HOM05D002799 ORTHO05D007076 5.9e-18 93.6 62 62.9
Pp3c3_18900 Physcomitrium patens HOM05D002799 ORTHO05D007076 5.5e-16 87.0 62 58.1
Cfa015896 Carpinus fangiana HOM05D002799 ORTHO05D007076 1.5e-13 79.0 41 82.9
CBR_g26239 Chara braunii HOM05D002799 ORTHO05D007076 3.3e-13 77.8 61 50.8
Hund09770 Selenicereus undatus HOM05D002799 ORTHO05D007076 1.6e-12 75.5 90 48.9
Solyc03g006452.1 Solanum lycopersicum HOM05D002799 ORTHO05D007076 2.2e-12 75.1 61 60.7
Nitab4.5_0000701g0060 Nicotiana tabacum HOM05D002799 ORTHO05D007076 2.8e-12 74.7 41 80.5
Lj3A801T16 Lonicera japonica HOM05D002799 ORTHO05D007076 9.1e-11 69.7 60 55.0
unitig_62.g23564 Utricularia gibba HOM05D002799 ORTHO05D007076 3.8e-09 64.3 41 68.3
FvH4_7g33593 Fragaria vesca HOM05D002799 ORTHO05D007076 8.5e-09 63.2 34 79.4
Cre06.g267850 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D007076 3.2e-08 61.2 64 45.3
Hma1.2p1_0758F.1_g213590 Hydrangea macrophylla HOM05D002799 ORTHO05D007076 7.2e-08 60.1 40 67.5


User provided reference genes

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