Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 5.3e-187 657.5 328 100.0
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 6.1e-175 617.5 323 95.0
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 1.5e-173 612.8 320 95.6
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 1.3e-172 609.8 325 92.9
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 1.0e-169 600.1 332 90.7
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 2.5e-168 595.5 332 90.1
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 1.1e-165 586.6 320 91.2
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 2.6e-165 585.5 333 88.0
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 4.8e-164 581.3 328 88.7
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 1.5e-152 543.1 326 83.7
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 1.2e-138 496.9 320 78.4
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 3.5e-138 495.4 318 77.7
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 1.7e-137 493.0 326 75.8
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 7.3e-136 487.6 333 75.7
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 1.6e-135 486.5 326 74.8
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 3.0e-134 482.3 326 74.5
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 8.9e-134 480.7 318 76.1
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 3.4e-133 478.8 322 74.2
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 1.3e-132 476.9 333 70.9
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 2.9e-132 475.7 323 73.7
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 6.4e-132 474.6 323 74.6
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 8.3e-132 474.2 336 70.8
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 8.3e-132 474.2 332 72.6
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 1.4e-131 473.4 328 75.3
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 1.8e-131 473.0 324 73.5
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 4.1e-131 471.9 322 73.6
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 7.0e-131 471.1 319 72.1
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 7.0e-131 471.1 336 73.2
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 7.0e-131 471.1 323 74.0
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 9.2e-131 470.7 322 72.7
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 1.2e-130 470.3 321 74.8
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.0e-130 469.5 320 74.4
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 2.0e-130 469.5 328 74.4
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 2.7e-130 469.2 322 73.0
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 3.5e-130 468.8 323 73.1
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 4.6e-130 468.4 323 73.1
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 5.9e-130 468.0 337 70.9
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 5.9e-130 468.0 323 74.0
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 1.3e-129 466.8 322 74.8
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 1.7e-129 466.5 329 71.7
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 1.7e-129 466.5 329 71.7
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.7e-129 466.5 320 74.4
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 3.0e-129 465.7 327 70.6
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.0e-129 465.7 320 74.1
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.0e-129 465.7 320 74.1
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 8.6e-129 464.2 322 72.7
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 1.9e-128 463.0 329 71.4
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 1.9e-128 463.0 329 71.4
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.2e-127 460.3 321 72.9
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 2.1e-127 459.5 328 69.8
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 3.6e-127 458.8 320 73.4
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 3.6e-127 458.8 320 72.5
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 8.0e-127 457.6 320 73.4
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 8.0e-127 457.6 327 68.8
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 8.0e-127 457.6 338 69.2
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 1.4e-126 456.8 336 70.2
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 1.8e-126 456.4 330 70.0
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 3.1e-126 455.7 320 72.2
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 3.1e-126 455.7 340 70.0
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 8.9e-126 454.1 333 70.3
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 2.9e-124 449.1 317 71.9
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 3.7e-124 448.7 329 70.2
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 3.7e-124 448.7 320 71.9
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 4.9e-124 448.4 318 71.1
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 1.9e-123 446.4 337 68.2
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 4.1e-123 445.3 319 70.2
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 2.0e-122 443.0 318 70.4
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.0e-121 440.7 338 67.2
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 1.1e-120 437.2 333 67.9
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 2.5e-120 436.0 315 71.7
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 7.3e-120 434.5 310 70.6
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 2.1e-119 433.0 340 67.1
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 1.5e-117 426.8 308 70.5
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 1.5e-117 426.8 333 66.4
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 1.4e-115 420.2 322 69.3
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 4.6e-114 415.2 326 66.0
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.5e-112 409.5 277 73.6
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 6.2e-111 404.8 277 73.3
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 2.3e-110 402.9 326 63.8
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 2.6e-109 399.4 315 66.0
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 3.4e-109 399.1 316 67.4
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 1.7e-108 396.7 324 64.8
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 1.5e-104 383.6 336 61.0
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 1.6e-103 380.2 386 57.0
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 2.6e-101 372.9 321 61.7
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 2.6e-101 372.9 420 50.7
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 6.4e-100 368.2 270 71.1
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 8.4e-100 367.9 316 61.7
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 1.6e-98 363.6 360 56.9
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 2.7e-98 362.8 333 58.6
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 1.3e-95 354.0 360 55.0
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 4.6e-90 335.5 316 54.1
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 5.3e-86 322.0 314 55.4
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 4.2e-83 312.4 315 51.4
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 1.4e-78 297.4 206 70.4
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 4.5e-77 292.4 232 65.5
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 1.4e-70 270.8 294 50.7
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.9e-64 250.4 273 51.6
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 4.6e-58 229.2 165 73.3
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 2.6e-53 213.4 352 38.1
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 3.8e-52 209.5 298 39.6
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 4.4e-48 196.1 187 58.3
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.2e-45 188.0 178 55.1
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.4e-38 164.5 104 76.9
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 4.1e-38 162.9 117 63.2
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 5.0e-36 156.0 114 66.7
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 9.5e-19 98.6 227 35.2
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 5.9e-13 79.3 76 57.9
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 6.6e-12 75.9 50 66.0
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 2.9e-07 60.5 51 51.0


User provided reference genes

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