Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 1.1e-147 526.6 266 100.0
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 3.0e-132 475.3 269 91.8
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 1.6e-125 453.0 269 88.5
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 2.6e-115 419.1 276 79.7
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 2.6e-107 392.5 293 73.4
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 2.6e-107 392.5 293 73.4
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 2.9e-103 379.0 271 76.4
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 6.6e-103 377.9 270 75.9
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 8.6e-103 377.5 270 75.2
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 5.6e-102 374.8 270 75.9
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 3.2e-97 359.0 286 71.0
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 5.6e-94 348.2 288 65.6
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 7.3e-94 347.8 286 66.1
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 9.5e-94 347.4 289 68.2
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 1.6e-93 346.7 302 66.2
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 2.8e-93 345.9 274 68.6
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 2.8e-93 345.9 280 67.1
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 6.2e-93 344.7 291 65.6
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 8.0e-93 344.4 281 66.9
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 8.0e-93 344.4 273 67.8
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.8e-92 343.2 291 66.3
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.3e-92 342.8 283 65.4
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 6.8e-92 341.3 284 66.9
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 6.8e-92 341.3 309 63.1
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.5e-91 340.1 292 65.1
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 3.4e-91 339.0 275 70.2
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 4.4e-91 338.6 292 64.7
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 4.4e-91 338.6 292 65.4
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 4.4e-91 338.6 274 69.0
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 2.9e-90 335.9 294 63.9
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 2.9e-90 335.9 278 65.5
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 2.9e-90 335.9 267 67.4
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 4.9e-90 335.1 279 65.6
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 8.3e-90 334.3 276 69.2
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 3.2e-89 332.4 284 66.5
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 1.2e-88 330.5 289 64.0
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.2e-88 330.5 287 65.2
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 2.0e-88 329.7 287 65.2
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.5e-88 328.9 287 65.2
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 6.0e-88 328.2 283 65.7
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.7e-87 326.6 279 65.2
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 2.3e-87 326.2 289 63.7
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 3.0e-87 325.9 283 63.3
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 5.0e-87 325.1 287 64.1
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 6.6e-87 324.7 270 65.2
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 8.6e-87 324.3 284 63.0
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 1.9e-86 323.2 311 58.8
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 4.3e-86 322.0 283 64.7
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 7.3e-86 321.2 278 64.7
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 3.6e-85 318.9 203 79.8
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 6.2e-85 318.2 194 86.1
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 6.2e-85 318.2 283 64.0
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.4e-84 317.0 287 60.6
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.4e-84 317.0 293 63.8
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 1.8e-84 316.6 291 62.5
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 5.2e-84 315.1 273 65.9
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 5.8e-83 311.6 302 56.6
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 9.9e-83 310.8 276 62.3
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.7e-82 310.1 295 62.0
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 1.7e-82 310.1 276 63.8
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.1e-81 307.4 280 63.6
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 1.9e-81 306.6 294 61.2
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 3.2e-81 305.8 287 59.9
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 4.1e-81 305.4 277 61.4
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 5.4e-81 305.1 361 50.7
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 7.1e-81 304.7 408 48.0
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.2e-80 303.9 282 62.1
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 1.6e-80 303.5 245 66.9
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 1.0e-79 300.8 269 62.8
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 1.7e-79 300.1 278 61.5
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 6.6e-79 298.1 346 53.2
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 1.2e-77 293.9 287 60.6
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 2.8e-77 292.7 282 58.9
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 6.2e-77 291.6 273 59.3
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 1.8e-76 290.0 281 59.4
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 2.4e-76 289.7 218 68.3
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.7e-74 283.5 270 60.7
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 2.2e-74 283.1 285 58.9
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 3.8e-74 282.3 280 58.6
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 3.8e-74 282.3 199 71.4
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 4.9e-74 282.0 267 59.9
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 1.4e-73 280.4 286 57.3
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 3.2e-73 279.3 198 70.7
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 9.2e-73 277.7 277 59.2
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 9.2e-73 277.7 209 67.9
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 2.7e-72 276.2 269 59.1
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 1.7e-71 273.5 326 51.8
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 6.6e-71 271.6 296 54.7
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 6.6e-71 271.6 307 52.4
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 8.6e-71 271.2 306 53.6
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 2.1e-69 266.5 273 56.8
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 2.9e-66 256.1 199 65.8
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 8.4e-66 254.6 195 66.7
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 2.1e-64 250.0 234 62.0
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 7.3e-62 241.5 208 60.6
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 9.0e-60 234.6 313 47.6
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 4.5e-59 232.3 154 76.0
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 4.6e-56 222.2 249 56.2
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 2.3e-55 219.9 161 74.5
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 5.6e-54 215.3 268 52.2
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 3.8e-50 202.6 133 77.4
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 4.6e-48 195.7 131 74.8
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 2.3e-47 193.4 208 52.9
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 3.0e-47 193.0 250 45.6
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 7.9e-40 168.3 187 55.1
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.5e-38 164.1 110 76.4
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 1.8e-36 157.1 397 34.3
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 2.3e-31 140.2 140 56.4
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 3.9e-23 112.8 80 66.2
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 6.7e-23 112.1 281 34.2
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 6.7e-23 112.1 75 70.7
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.7e-21 106.3 221 38.5
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 6.3e-21 105.5 89 64.0
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 1.4e-12 77.8 219 30.6
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.7e-10 70.9 64 54.7
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 2.9e-10 70.1 38 89.5
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 3.8e-10 69.7 46 71.7
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 8.5e-10 68.6 37 86.5
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 3.2e-09 66.6 37 86.5
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 3.2e-09 66.6 34 94.1
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 3.3e-06 56.6 61 50.8


User provided reference genes

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