Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 4.3e-174 614.8 352 100.0
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 2.5e-134 482.6 353 77.1
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 5.3e-132 474.9 357 81.5
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 5.8e-131 471.5 353 81.0
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 3.9e-119 432.2 371 71.4
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 2.2e-114 416.4 371 66.6
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 2.5e-113 412.9 369 67.5
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 2.9e-106 389.4 372 64.8
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 8.5e-98 361.3 379 62.5
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 4.2e-97 359.0 281 69.0
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 1.6e-96 357.1 378 62.2
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 2.8e-85 319.7 318 58.5
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 3.2e-81 306.2 381 51.7
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 9.4e-81 304.7 402 51.0
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 1.7e-77 293.9 401 49.9
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 8.3e-77 291.6 379 51.5
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 4.1e-76 289.3 374 50.8
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 2.9e-74 283.1 351 51.6
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 5.0e-74 282.3 374 50.0
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 6.6e-74 282.0 364 51.1
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 2.5e-73 280.0 325 53.8
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 1.6e-72 277.3 374 48.9
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 3.6e-72 276.2 352 51.7
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 4.7e-72 275.8 394 46.2
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 6.1e-72 275.4 373 49.6
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 3.0e-71 273.1 344 52.3
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 3.0e-71 273.1 401 46.6
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 5.2e-71 272.3 316 53.2
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 8.9e-71 271.6 386 46.9
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 2.0e-70 270.4 284 57.4
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 5.7e-70 268.9 355 49.9
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 5.7e-70 268.9 357 48.5
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 1.3e-69 267.7 383 47.3
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 1.7e-69 267.3 193 79.3
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 2.2e-69 266.9 330 51.2
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 2.9e-69 266.5 321 51.4
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 3.7e-69 266.2 378 48.7
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 3.7e-69 266.2 354 50.6
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 1.8e-68 263.8 372 49.5
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 4.1e-68 262.7 388 46.6
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 7.0e-68 261.9 353 48.7
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 7.0e-68 261.9 382 46.3
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 1.2e-67 261.2 379 45.9
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 4.6e-67 259.2 368 48.1
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 5.9e-67 258.8 354 49.7
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 1.3e-66 257.7 318 53.5
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 1.3e-66 257.7 353 48.7
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 6.6e-66 255.4 374 46.5
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 1.9e-65 253.8 296 55.4
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 7.3e-65 251.9 357 46.8
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 7.3e-65 251.9 283 55.8
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 4.7e-64 249.2 361 45.4
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 4.7e-64 249.2 371 47.2
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 1.0e-63 248.1 357 46.8
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 4.0e-63 246.1 300 51.0
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 6.8e-63 245.4 375 46.1
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 3.4e-62 243.0 282 51.1
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 7.5e-62 241.9 388 44.8
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 9.8e-62 241.5 314 48.1
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 1.7e-61 240.7 283 49.8
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 2.9e-61 240.0 301 52.5
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 2.9e-61 240.0 301 52.5
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 4.9e-61 239.2 372 42.7
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 2.4e-60 236.9 297 51.5
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 7.0e-60 235.3 174 66.7
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 7.0e-60 235.3 281 51.6
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 9.2e-60 235.0 264 53.0
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 2.0e-59 233.8 284 51.4
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 2.7e-59 233.4 173 68.2
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 3.5e-59 233.0 290 51.7
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 3.5e-59 233.0 280 50.0
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 1.0e-58 231.5 289 49.5
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 1.0e-58 231.5 299 50.8
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.0e-58 231.5 382 43.2
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 1.3e-58 231.1 296 51.0
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 2.3e-58 230.3 380 43.9
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 3.3e-57 226.5 174 64.4
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 9.5e-57 224.9 341 45.5
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 2.8e-56 223.4 382 43.5
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 1.8e-55 220.7 281 52.3
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 1.2e-54 218.0 354 44.4
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 4.4e-54 216.1 146 69.2
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 7.5e-54 215.3 177 64.4
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 9.8e-54 214.9 376 42.6
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 2.9e-53 213.4 204 55.4
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 3.7e-53 213.0 320 46.2
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 3.7e-53 213.0 364 43.1
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 4.9e-53 212.6 288 48.3
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 1.4e-52 211.1 272 48.5
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 4.6e-51 206.1 311 44.7
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 1.7e-50 204.1 248 47.2
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 4.7e-48 196.1 363 40.2
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 1.7e-45 187.6 269 43.1
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 3.7e-45 186.4 174 58.0
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 9.2e-44 181.8 243 48.6
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 9.2e-44 181.8 294 41.5
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 1.2e-43 181.4 173 58.4
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 1.8e-39 167.5 308 36.4
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 7.6e-38 162.2 199 46.2
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 7.6e-38 162.2 167 48.5
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 2.9e-37 160.2 250 38.4
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.2e-36 156.8 352 37.2
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 3.2e-36 156.8 284 37.7
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 5.4e-36 156.0 206 46.1
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 1.3e-32 144.8 72 88.9
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.1e-31 141.7 350 33.7
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 4.9e-29 132.9 71 81.7
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 5.4e-28 129.4 74 79.7
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 3.0e-26 123.6 199 41.7
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 8.7e-18 95.5 323 32.8
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 2.5e-17 94.0 59 72.9
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 9.6e-17 92.0 115 40.9
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 1.3e-16 91.7 206 30.1
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 1.1e-12 78.6 168 33.3
ECA232G2176 Erigeron canadensis HOM05D006487 ORTHO05D007982 1.6e-11 74.7 258 34.9
BcaC05g27591 Brassica carinata HOM05D006487 ORTHO05D007982 4.3e-09 66.6 135 42.2
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 9.0e-07 58.9 238 26.9
BcaC05g27879 Brassica carinata HOM05D024450 ORTHO05D007982 1.5e-06 58.2 74 50.0


User provided reference genes

Program Settings