Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19790 Trifolium pratense HOM05D003044 ORTHO05D001869 3.2e-296 1021.5 745 100.0
Ca_18140_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 1.2e-173 614.4 672 65.6
Psat6g049400 Pisum sativum HOM05D003044 ORTHO05D001869 5.3e-150 535.8 715 57.6
Medtr1g040610 Medicago truncatula HOM05D003044 ORTHO05D001869 2.7e-146 523.5 662 58.0
Lj6g0024518 Lotus japonicus HOM05D003044 ORTHO05D001869 1.1e-134 485.0 678 60.3
Lalb_Chr19g0128991 Lupinus albus HOM05D003044 ORTHO05D001869 2.2e-119 434.1 683 54.9
Phvul.007G233800 Phaseolus vulgaris HOM05D003044 ORTHO05D001869 1.4e-115 421.4 695 54.1
VMungo0720G1731 Vigna mungo HOM05D003044 ORTHO05D001869 2.6e-112 410.6 693 55.1
Glyma.10G120200 Glycine max HOM05D003044 ORTHO05D001869 9.1e-110 402.1 704 51.3
Lalb_Chr01g0010681 Lupinus albus HOM05D003044 ORTHO05D001869 2.5e-99 367.5 682 52.8
Glyma.10G194700 Glycine max HOM05D003044 ORTHO05D001869 4.0e-97 360.1 694 45.0
Glyma.20G195200 Glycine max HOM05D003044 ORTHO05D001869 1.4e-78 298.5 682 45.3
Psat6g171360 Pisum sativum HOM05D003044 ORTHO05D001869 4.4e-72 276.9 733 38.9
Ca_10422_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 2.4e-70 271.2 678 40.0
VMungo0720G0604 Vigna mungo HOM05D003044 ORTHO05D001869 9.2e-70 269.2 686 41.8
Lalb_Chr21g0312741 Lupinus albus HOM05D003044 ORTHO05D001869 6.2e-66 256.5 703 46.2
Phvul.007G136500 Phaseolus vulgaris HOM05D003044 ORTHO05D001869 1.8e-65 255.0 687 40.2
Medtr1g090340 Medicago truncatula HOM05D003044 ORTHO05D001869 3.7e-63 247.3 707 38.2
Lalb_Chr02g0150891 Lupinus albus HOM05D003044 ORTHO05D001869 1.5e-59 235.3 728 41.9
Lj5g0009221 Lotus japonicus HOM05D003044 ORTHO05D001869 3.8e-55 220.7 708 40.0
arahy.Tifrunner.gnm1.ann1.Y6HWEI Arachis hypogaea HOM05D003044 ORTHO05D001869 7.8e-53 213.0 794 40.2
arahy.Tifrunner.gnm1.ann1.JKR5UJ Arachis hypogaea HOM05D003044 ORTHO05D001869 3.9e-52 210.7 794 41.1
Glyma.20G070600 Glycine max HOM05D003044 ORTHO05D001869 4.2e-46 190.7 212 56.1
QL04p048819 Quercus lobata HOM05D003044 ORTHO05D001869 5.5e-30 137.1 746 35.1
QL04p049165 Quercus lobata HOM05D003044 ORTHO05D001869 5.5e-30 137.1 746 35.1
Dinv04420 Davidia involucrata HOM05D003044 ORTHO05D001869 3.0e-28 131.3 637 37.0
Ca_10372_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 4.8e-26 124.0 204 43.6
Haze_03430 Corylus avellana HOM05D003044 ORTHO05D001869 1.1e-25 122.9 707 39.3
TAR633G1492 Trochodendron aralioides HOM05D003044 ORTHO05D001869 1.4e-22 112.5 681 34.5
CSS0031943 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 2.5e-22 111.7 693 28.3
Duzib106G0590 Durio zibethinus HOM05D003044 ORTHO05D001869 6.1e-21 107.1 244 39.3
Duzib128G0650 Durio zibethinus HOM05D003044 ORTHO05D001869 3.9e-20 104.4 262 38.5
Duzib114G0797 Durio zibethinus HOM05D003044 ORTHO05D001869 9.7e-19 99.8 262 38.5
TAR636G1345 Trochodendron aralioides HOM05D003044 ORTHO05D001869 1.6e-18 99.0 662 32.0
Dinv03806 Davidia involucrata HOM05D003044 ORTHO05D001869 3.7e-18 97.8 724 27.6
Lj2A36T50 Lonicera japonica HOM05D003044 ORTHO05D001869 6.3e-18 97.1 569 31.8
TWI15G1087 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 1.1e-17 96.3 264 49.6
ClCG08G008450 Citrullus lanatus HOM05D003044 ORTHO05D001869 1.4e-17 95.9 704 27.8
Gorai.012G022500 Gossypium raimondii HOM05D003044 ORTHO05D001869 1.8e-17 95.5 262 41.2
Atru.chr12.1090 Acer truncatum HOM05D003044 ORTHO05D001869 2.4e-17 95.1 695 35.0
Gorai.012G022400 Gossypium raimondii HOM05D003044 ORTHO05D001869 4.1e-17 94.4 244 45.1
Gohir.D04G019000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 9.0e-17 93.2 262 39.7
Gohir.D04G018900 Gossypium hirsutum HOM05D003044 ORTHO05D001869 1.2e-16 92.8 244 44.3
Thecc.10G119700 Theobroma cacao HOM05D003044 ORTHO05D001869 1.2e-16 92.8 256 43.0
MELO3C019915.2 Cucumis melo HOM05D003044 ORTHO05D001869 4.5e-16 90.9 702 33.6
TWI63G0823 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 2.2e-15 88.6 251 41.4
CsaV3_6G004440 Cucumis sativus L. HOM05D003044 ORTHO05D001869 6.5e-15 87.0 683 38.1
Potri.010G244700 Populus trichocarpa HOM05D003044 ORTHO05D001869 6.5e-15 87.0 681 31.3
Actinidia31115 Actinidia chinensis HOM05D003044 ORTHO05D001869 9.4e-14 83.2 503 37.4
Aqoxy2G00627 Aquilegia oxysepala HOM05D003044 ORTHO05D001869 1.2e-13 82.8 634 33.0
Hma1.2p1_0153F.1_g067850 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 1.2e-13 82.8 544 29.6
Cfa010501 Carpinus fangiana HOM05D003044 ORTHO05D001869 1.6e-13 82.4 703 37.1
Gohir.A05G396000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 3.6e-13 81.3 292 34.6
Rhsim03G0094000 Rhododendron simsii HOM05D003044 ORTHO05D001869 3.6e-13 81.3 569 31.5
Gohir.D04G019080 Gossypium hirsutum HOM05D003044 ORTHO05D001869 6.7e-12 77.0 261 34.9
Gorai.012G022800 Gossypium raimondii HOM05D003044 ORTHO05D001869 6.7e-12 77.0 261 34.9
Gohir.A05G396100 Gossypium hirsutum HOM05D003044 ORTHO05D001869 1.1e-11 76.3 98 55.1
Potri.008G015350 Populus trichocarpa HOM05D003044 ORTHO05D001869 9.7e-11 73.2 230 42.2
Psat4g227200 Pisum sativum HOM05D003044 ORTHO05D001869 1.1e-09 69.7 60 61.7
Nn6g34615 Nelumbo nucifera HOM05D003044 ORTHO05D001869 3.1e-09 68.2 688 33.9
CANSAT56G3871 Cannabis sativa HOM05D003044 ORTHO05D001869 1.2e-08 66.2 715 30.8
RcHm_v2.0_Chr1g0332241 Rosa chinensis HOM05D003044 ORTHO05D001869 1.2e-08 66.2 58 62.1
FAN10G1738 Fragaria x ananassa HOM05D003044 ORTHO05D001869 1.5e-08 65.9 309 43.0
Prupe.2G074800 Prunus persica HOM05D003044 ORTHO05D001869 1.5e-08 65.9 56 62.5
Sabra10G0191200 Salix brachista HOM05D003044 ORTHO05D001869 3.8e-07 61.2 232 40.5
Manes.10G059500 Manihot esculenta HOM05D003044 ORTHO05D001869 5.0e-07 60.8 688 28.1
Oeu015285.1 Olea europaea HOM05D003044 ORTHO05D001869 8.5e-07 60.1 94 43.6
FAN10G0351 Fragaria x ananassa HOM05D003044 ORTHO05D001869 1.9e-06 58.9 319 37.6
CSS0000792 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 2.5e-06 58.5 563 30.9
Ciclev10014057m.g Citrus clementina HOM05D003044 ORTHO05D001869 3.2e-06 58.2 730 28.8
FAN03G0021 Fragaria x ananassa HOM05D003044 ORTHO05D001869 3.2e-06 58.2 319 37.0


User provided reference genes

Program Settings