Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19783 Trifolium pratense HOM05D007468 ORTHO05D009051 3.6e-97 358.6 232 100.0
Medtr1g087720 Medicago truncatula HOM05D007468 ORTHO05D009051 7.9e-44 181.4 291 44.7
Psat6g163440 Pisum sativum HOM05D007468 ORTHO05D009051 1.0e-43 181.0 244 50.4
Ca_10302_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 1.2e-36 157.5 203 53.7
Glyma.02G014400 Glycine max HOM05D007468 ORTHO05D009051 1.8e-35 153.7 250 46.8
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 9.0e-32 141.4 234 46.6
Phvul.007G216300 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 3.4e-31 139.4 253 42.7
Lalb_Chr21g0309461 Lupinus albus HOM05D007468 ORTHO05D009051 7.6e-31 138.3 233 45.5
Lj5g0007724 Lotus japonicus HOM05D007468 ORTHO05D009051 1.9e-26 123.6 244 40.2
Glyma.19G214800 Glycine max HOM05D007468 ORTHO05D009051 8.5e-22 108.2 250 38.8
Phvul.001G211600 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 1.1e-21 107.8 226 39.4
TPR.G20290 Trifolium pratense HOM05D007468 ORTHO05D009051 3.2e-21 106.3 256 35.5
Psat3g020640 Pisum sativum HOM05D007468 ORTHO05D009051 7.2e-21 105.1 251 34.7
Lalb_Chr15g0078361 Lupinus albus HOM05D007468 ORTHO05D009051 3.6e-20 102.8 280 33.6
VMungo0720G2271 Vigna mungo HOM05D007468 ORTHO05D009051 1.4e-19 100.9 260 35.8
Medtr7g109300 Medicago truncatula HOM05D007468 ORTHO05D009051 2.3e-19 100.1 302 30.1
Ca_09200_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 5.1e-19 99.0 251 34.3
Glyma.03G218100 Glycine max HOM05D007468 ORTHO05D009051 6.7e-19 98.6 257 35.0
Psat5g096000 Pisum sativum HOM05D007468 ORTHO05D009051 1.3e-17 94.4 239 33.9
Lalb_Chr08g0237891 Lupinus albus HOM05D007468 ORTHO05D009051 1.4e-13 80.9 246 33.3
Lj1g0017695 Lotus japonicus HOM05D007468 ORTHO05D009051 3.2e-13 79.7 211 34.1
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 7.9e-12 75.1 216 32.9
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 1.0e-11 74.7 233 30.9
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 5.1e-11 72.4 241 29.5
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 2.0e-10 70.5 214 29.4
CsaV3_4G001100 Cucumis sativus L. HOM05D007468 ORTHO05D009051 2.0e-10 70.5 222 38.7
Gorai.001G142900 Gossypium raimondii HOM05D007468 ORTHO05D009051 3.3e-10 69.7 225 32.0
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 5.7e-10 68.9 195 30.3
CANSAT25G0675 Cannabis sativa HOM05D007468 ORTHO05D009051 7.4e-10 68.6 229 29.3
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 7.4e-10 68.6 228 32.0
Duzib133G0259 Durio zibethinus HOM05D007468 ORTHO05D009051 1.7e-09 67.4 229 31.9
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 1.7e-09 67.4 215 32.1
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 2.2e-09 67.0 230 32.2
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 2.2e-09 67.0 174 31.0
Gohir.D07G131600 Gossypium hirsutum HOM05D007468 ORTHO05D009051 3.7e-09 66.2 202 31.2
Sed0007650 Sechium edule HOM05D007468 ORTHO05D009051 3.7e-09 66.2 225 28.9
Manes.01G225500 Manihot esculenta HOM05D007468 ORTHO05D009051 4.8e-09 65.9 202 29.7
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 4.8e-09 65.9 221 30.8
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 4.8e-09 65.9 219 27.4
CiPaw.08G091800 Carya illinoinensis HOM05D007468 ORTHO05D009051 6.3e-09 65.5 73 54.8
Gohir.A07G127300 Gossypium hirsutum HOM05D007468 ORTHO05D009051 6.3e-09 65.5 187 29.9
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 8.2e-09 65.1 223 26.9
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 1.4e-08 64.3 204 30.4
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 1.4e-08 64.3 197 31.0
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 1.8e-08 63.9 224 30.4
VMungo1383G0307 Vigna mungo HOM05D007468 ORTHO05D009051 1.8e-08 63.9 96 50.0
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 3.1e-08 63.2 167 34.1
MELO3C017927.2 Cucumis melo HOM05D007468 ORTHO05D009051 3.1e-08 63.2 220 32.3
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 3.1e-08 63.2 226 27.4
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 3.1e-08 63.2 189 29.1
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 4.1e-08 62.8 176 32.4
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 9.1e-08 61.6 215 29.3
Thecc.01G309900 Theobroma cacao HOM05D007468 ORTHO05D009051 2.0e-07 60.5 234 29.1
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 4.5e-07 59.3 224 29.0
Cfa005843 Carpinus fangiana HOM05D007468 ORTHO05D009051 5.9e-07 58.9 108 39.8
Lj1C20T8 Lonicera japonica HOM05D007468 ORTHO05D009051 5.9e-07 58.9 221 28.1
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 5.9e-07 58.9 177 29.9
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 1.0e-06 58.2 162 32.7
Haze_05006 Corylus avellana HOM05D007468 ORTHO05D009051 1.0e-06 58.2 215 28.4
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 1.0e-06 58.2 177 29.4
CiPaw.07G114800 Carya illinoinensis HOM05D007468 ORTHO05D009051 1.7e-06 57.4 95 43.2
ClCG10G011220 Citrullus lanatus HOM05D007468 ORTHO05D009051 1.7e-06 57.4 176 30.7
DCAR_002873 Daucus carota HOM05D007468 ORTHO05D009051 5.0e-06 55.8 205 26.3
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 5.0e-06 55.8 201 29.9
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 6.5e-06 55.5 201 27.9
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 6.5e-06 55.5 201 27.9
TAR365G0390 Trochodendron aralioides HOM05D007468 ORTHO05D009051 6.5e-06 55.5 201 25.4
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 8.5e-06 55.1 201 27.9


User provided reference genes

Program Settings