Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19764 Trifolium pratense HOM05D007822 ORTHO05D009360 4.4e-74 281.2 140 100.0
TPR.G33992 Trifolium pratense HOM05D007822 ORTHO05D009360 7.3e-61 237.3 127 93.7
TPR.G34648 Trifolium pratense HOM05D007822 ORTHO05D009360 3.9e-46 188.3 128 73.4
TPR.G34642 Trifolium pratense HOM05D007822 ORTHO05D009360 4.3e-45 184.9 128 72.7
Medtr3g084690 Medicago truncatula HOM05D007822 ORTHO05D009360 6.4e-41 171.0 128 65.6
Medtr1g016400 Medicago truncatula HOM05D007822 ORTHO05D009360 8.4e-41 170.6 127 68.5
Medtr1g017120 Medicago truncatula HOM05D007822 ORTHO05D009360 8.4e-41 170.6 127 68.5
TPR.G18087 Trifolium pratense HOM05D007822 ORTHO05D009360 1.9e-40 169.5 129 69.0
TPR.G18082 Trifolium pratense HOM05D007822 ORTHO05D009360 6.0e-39 164.5 129 65.1
Psat5g098960 Pisum sativum HOM05D007822 ORTHO05D009360 1.3e-38 163.3 128 63.3
Medtr3g084660 Medicago truncatula HOM05D007822 ORTHO05D009360 2.4e-32 142.5 129 59.7
TPR.G24719 Trifolium pratense HOM05D007822 ORTHO05D009360 9.3e-32 140.6 115 64.3
Medtr3g084700 Medicago truncatula HOM05D007822 ORTHO05D009360 2.3e-30 136.0 130 58.5
Medtr2g450270 Medicago truncatula HOM05D007822 ORTHO05D009360 4.0e-27 125.2 102 61.8
Glyma.03G020200 Glycine max HOM05D007822 ORTHO05D009360 3.4e-26 122.1 123 54.5
TPR.G25296 Trifolium pratense HOM05D007822 ORTHO05D009360 6.4e-25 117.9 93 61.3
TPR.G19769 Trifolium pratense HOM05D007822 ORTHO05D009360 1.6e-23 113.2 65 89.2
Ca_08383_v3 Cicer arietinum L. HOM05D007822 ORTHO05D009360 3.0e-22 109.0 126 46.8
Glyma.16G161700 Glycine max HOM05D007822 ORTHO05D009360 3.0e-22 109.0 123 48.0
Rhsim01G0262200 Rhododendron simsii HOM05D007822 ORTHO05D009360 1.3e-20 103.6 122 48.4
Prupe.2G273800 Prunus persica HOM05D007822 ORTHO05D009360 1.8e-19 99.8 130 47.7
VMungo1215G0886 Vigna mungo HOM05D007822 ORTHO05D009360 1.8e-19 99.8 130 44.6
Dinv16858 Davidia involucrata HOM05D007822 ORTHO05D009360 4.0e-19 98.6 118 47.5
Glyma.15G092300 Glycine max HOM05D007822 ORTHO05D009360 5.3e-19 98.2 126 46.8
Lalb_Chr07g0186991 Lupinus albus HOM05D007822 ORTHO05D009360 1.7e-17 93.2 129 44.2
Phvul.001G264800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.9e-17 92.4 119 42.9
Phvul.001G264900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 4.9e-17 91.7 119 42.0
Rhsim09G0189100 Rhododendron simsii HOM05D007822 ORTHO05D009360 1.9e-16 89.7 120 47.5
Sc09g0001460 Simmondsia chinensis HOM05D007822 ORTHO05D009360 2.5e-16 89.4 126 39.7
Phvul.004G062200 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 7.1e-16 87.8 119 42.0
Phvul.002G276000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 9.3e-16 87.4 119 40.3
Phvul.003G159000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.1e-15 86.3 119 41.2
Phvul.006G052100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 2.1e-15 86.3 119 41.2
Rhsim10G0180500 Rhododendron simsii HOM05D007822 ORTHO05D009360 2.1e-15 86.3 120 45.8
Sc09g0001470 Simmondsia chinensis HOM05D007822 ORTHO05D009360 2.1e-15 86.3 130 43.8
arahy.Tifrunner.gnm1.ann1.A760R9 Arachis hypogaea HOM05D007822 ORTHO05D009360 3.5e-15 85.5 126 44.4
Rhsim09G0015300 Rhododendron simsii HOM05D007822 ORTHO05D009360 7.9e-15 84.3 116 44.0
arahy.Tifrunner.gnm1.ann1.6X56G5 Arachis hypogaea HOM05D007822 ORTHO05D009360 3.9e-14 82.0 123 43.9
Phvul.001G265100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 3.9e-14 82.0 119 38.7
arahy.Tifrunner.gnm1.ann1.00A0K2 Arachis hypogaea HOM05D007822 ORTHO05D009360 8.7e-14 80.9 123 43.9
arahy.Tifrunner.gnm1.ann1.N9Y9CH Arachis hypogaea HOM05D007822 ORTHO05D009360 8.7e-14 80.9 123 43.1
arahy.Tifrunner.gnm1.ann1.HWH8LL Arachis hypogaea HOM05D007822 ORTHO05D009360 2.5e-13 79.3 126 42.1
arahy.Tifrunner.gnm1.ann1.LY7S5B Arachis hypogaea HOM05D007822 ORTHO05D009360 3.3e-13 79.0 135 39.3
VMungo1309G2027 Vigna mungo HOM05D007822 ORTHO05D009360 5.7e-13 78.2 106 43.4
arahy.Tifrunner.gnm1.ann1.2QW5CK Arachis hypogaea HOM05D007822 ORTHO05D009360 7.4e-13 77.8 118 44.9
arahy.Tifrunner.gnm1.ann1.JJB16R Arachis hypogaea HOM05D007822 ORTHO05D009360 2.1e-12 76.3 123 42.3
arahy.Tifrunner.gnm1.ann1.UXA4FW Arachis hypogaea HOM05D007822 ORTHO05D009360 6.3e-12 74.7 120 41.7
TPR.G5267 Trifolium pratense HOM05D007822 ORTHO05D009360 2.4e-11 72.8 109 40.4
arahy.Tifrunner.gnm1.ann1.30JHYY Arachis hypogaea HOM05D007822 ORTHO05D009360 2.6e-10 69.3 123 39.0
Phvul.006G051800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.0e-09 67.4 82 45.1
arahy.Tifrunner.gnm1.ann1.Z44N3D Arachis hypogaea HOM05D007822 ORTHO05D009360 2.9e-09 65.9 96 44.8
Oeu042537.1 Olea europaea HOM05D007822 ORTHO05D009360 1.4e-08 63.5 128 37.5
arahy.Tifrunner.gnm1.ann1.GB1I3E Arachis hypogaea HOM05D007822 ORTHO05D009360 2.5e-08 62.8 88 44.3
Phvul.004G062300 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 9.3e-08 60.8 81 43.2
Thecc.09G282200 Theobroma cacao HOM05D002420 ORTHO05D002422 2.3e-06 56.2 124 31.5


User provided reference genes

Program Settings