Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19712 Trifolium pratense HOM05D005433 ORTHO05D006675 4.6e-130 468.0 256 100.0
Medtr6g042030 Medicago truncatula HOM05D005433 ORTHO05D006675 3.8e-84 315.5 267 73.0
Psat1g075280 Pisum sativum HOM05D005433 ORTHO05D006675 2.8e-82 309.3 262 71.0
Lj2g0011732 Lotus japonicus HOM05D005433 ORTHO05D006675 6.8e-57 224.9 261 56.7
Glyma.06G235100 Glycine max HOM05D005433 ORTHO05D006675 3.9e-44 182.6 261 52.1
ClCG05G009210 Citrullus lanatus HOM05D005433 ORTHO05D006675 8.1e-42 174.9 277 48.0
Lj3g0015051 Lotus japonicus HOM05D005433 ORTHO05D006675 4.0e-41 172.6 299 44.5
Ciclev10009151m.g Citrus clementina HOM05D005433 ORTHO05D006675 5.3e-41 172.2 278 48.2
Glyma.12G227200 Glycine max HOM05D005433 ORTHO05D006675 4.5e-40 169.1 286 45.5
CANSAT35G1219 Cannabis sativa HOM05D005433 ORTHO05D006675 3.8e-39 166.0 204 54.4
CSS0020446 Camellia sinensis var. sinensis HOM05D005433 ORTHO05D006675 8.4e-39 164.9 275 46.9
arahy.Tifrunner.gnm1.ann1.H96BGA Arachis hypogaea HOM05D005433 ORTHO05D006675 1.1e-38 164.5 293 42.7
MD03G1235600 Malus domestica HOM05D005433 ORTHO05D006675 1.1e-38 164.5 207 54.6
CsaV3_3G019570 Cucumis sativus L. HOM05D005433 ORTHO05D006675 1.4e-38 164.1 281 45.2
Cpa.g.sc80.11 Carica papaya HOM05D005433 ORTHO05D006675 9.3e-38 161.4 203 53.7
Lalb_Chr25g0286191 Lupinus albus HOM05D005433 ORTHO05D006675 1.6e-37 160.6 286 44.1
QL08p023594 Quercus lobata HOM05D005433 ORTHO05D006675 1.6e-37 160.6 288 44.4
TWI38G0185 Tripterygium wilfordii HOM05D005433 ORTHO05D006675 2.1e-37 160.2 289 43.3
PGR083G2284 Punica granatum HOM05D005433 ORTHO05D006675 2.7e-37 159.8 200 53.0
FvH4_3g19170 Fragaria vesca HOM05D005433 ORTHO05D006675 6.0e-37 158.7 294 44.2
FAN25G0011 Fragaria x ananassa HOM05D005433 ORTHO05D006675 6.0e-37 158.7 294 43.9
VMungo0331G0725 Vigna mungo HOM05D005433 ORTHO05D006675 6.0e-37 158.7 289 45.3
MSTRG.12890 Avicennia marina HOM05D005433 ORTHO05D006675 7.9e-37 158.3 227 45.8
Atru.chr2.2384 Acer truncatum HOM05D005433 ORTHO05D006675 1.8e-36 157.1 191 53.4
Cfa020622 Carpinus fangiana HOM05D005433 ORTHO05D006675 1.8e-36 157.1 290 42.8
arahy.Tifrunner.gnm1.ann1.8TDA44 Arachis hypogaea HOM05D005433 ORTHO05D006675 2.3e-36 156.8 283 45.2
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 3.0e-36 156.4 271 45.8
Ca_30930_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 3.0e-36 156.4 271 45.8
FAN11G1719 Fragaria x ananassa HOM05D005433 ORTHO05D006675 3.0e-36 156.4 293 44.4
Manes.03G104600 Manihot esculenta HOM05D005433 ORTHO05D006675 3.0e-36 156.4 221 48.4
Phvul.010G112200 Phaseolus vulgaris HOM05D005433 ORTHO05D006675 3.0e-36 156.4 283 44.2
EL10Ac4g08262 Beta vulgaris HOM05D005433 ORTHO05D006675 5.1e-36 155.6 271 43.2
Lsat_1_v5_gn_5_127421 Lactuca sativa HOM05D005433 ORTHO05D006675 6.7e-36 155.2 198 51.5
PSO541G1927 Papaver somniferum HOM05D005433 ORTHO05D006675 8.7e-36 154.8 207 48.8
PSO675G6755 Papaver somniferum HOM05D005433 ORTHO05D006675 8.7e-36 154.8 207 48.8
GSVIVG01014263001 Vitis vinifera HOM05D005433 ORTHO05D006675 1.1e-35 154.5 269 45.7
FAN16G0161 Fragaria x ananassa HOM05D005433 ORTHO05D006675 1.5e-35 154.1 207 51.2
arahy.Tifrunner.gnm1.ann1.7LX6SY Arachis hypogaea HOM05D005433 ORTHO05D006675 1.9e-35 153.7 295 41.7
CiPaw.12G116900 Carya illinoinensis HOM05D005433 ORTHO05D006675 1.9e-35 153.7 292 43.5
CDE10G1174 Ceratophyllum demersum HOM05D005433 ORTHO05D006675 1.9e-35 153.7 216 44.9
Migut.H01964 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.9e-35 153.7 183 53.6
Hma1.2p1_0416F.1_g148475 Hydrangea macrophylla HOM05D005433 ORTHO05D006675 1.9e-35 153.7 265 45.7
RcHm_v2.0_Chr5g0032261 Rosa chinensis HOM05D005433 ORTHO05D006675 1.9e-35 153.7 281 42.7
Haze_09383 Corylus avellana HOM05D005433 ORTHO05D006675 2.5e-35 153.3 292 41.8
Nn1g06380 Nelumbo nucifera HOM05D005433 ORTHO05D006675 3.3e-35 152.9 278 42.8
Sc16g0007310 Simmondsia chinensis HOM05D005433 ORTHO05D006675 3.3e-35 152.9 258 43.0
TPR.G17538 Trifolium pratense HOM05D005433 ORTHO05D006675 3.3e-35 152.9 229 46.3
Sabra11G0091300 Salix brachista HOM05D005433 ORTHO05D006675 9.6e-35 151.4 287 42.2
Gorai.007G325500 Gossypium raimondii HOM05D005433 ORTHO05D006675 1.3e-34 151.0 219 47.9
Psat5g241440 Pisum sativum HOM05D005433 ORTHO05D006675 1.6e-34 150.6 287 42.9
arahy.Tifrunner.gnm1.ann1.2X8QJZ Arachis hypogaea HOM05D005433 ORTHO05D006675 2.1e-34 150.2 275 44.0
HanXRQChr10g0302491 Helianthus annuus HOM05D005433 ORTHO05D006675 2.1e-34 150.2 252 45.2
Medtr2g078540 Medicago truncatula HOM05D005433 ORTHO05D006675 2.1e-34 150.2 274 44.2
Eucgr.F01178 Eucalyptus grandis HOM05D005433 ORTHO05D006675 2.8e-34 149.8 196 48.5
MSTRG.15245 Avicennia marina HOM05D005433 ORTHO05D006675 3.7e-34 149.4 258 43.0
Actinidia35236 Actinidia chinensis HOM05D005433 ORTHO05D006675 6.2e-34 148.7 204 51.0
Potri.011G097800 Populus trichocarpa HOM05D005433 ORTHO05D006675 6.2e-34 148.7 203 50.2
Gohir.A11G286600 Gossypium hirsutum HOM05D005433 ORTHO05D006675 8.1e-34 148.3 260 44.6
Migut.M00771 Erythranthe guttata HOM05D005433 ORTHO05D006675 1.1e-33 147.9 235 45.5
Gohir.A01G060400 Gossypium hirsutum HOM05D005433 ORTHO05D006675 1.4e-33 147.5 264 42.0
SGA_v2.0_scaffold73G24224 Striga asiatica HOM05D005433 ORTHO05D006675 1.4e-33 147.5 266 44.0
Thecc.07G099400 Theobroma cacao HOM05D005433 ORTHO05D006675 1.4e-33 147.5 267 41.6
Duzib213G0446 Durio zibethinus HOM05D005433 ORTHO05D006675 2.4e-33 146.7 262 41.6
SalBow8G0584 Salvia bowleyana HOM05D005433 ORTHO05D006675 3.1e-33 146.4 221 46.6
ATR0602G229 Amborella trichopoda HOM05D005433 ORTHO05D006675 4.0e-33 146.0 214 43.9
Gohir.D11G306500 Gossypium hirsutum HOM05D005433 ORTHO05D006675 4.0e-33 146.0 255 44.3
Gorai.002G066400 Gossypium raimondii HOM05D005433 ORTHO05D006675 4.0e-33 146.0 264 41.7
Gohir.D01G046900 Gossypium hirsutum HOM05D005433 ORTHO05D006675 5.3e-33 145.6 264 41.7
MBI07_g32542_MAGBIO Magnolia biondii HOM05D005433 ORTHO05D006675 5.3e-33 145.6 208 49.5
Thhalv10021284m.g Eutrema salsugineum HOM05D005433 ORTHO05D006675 6.9e-33 145.2 202 47.5
Sp3g13310 Schrenkiella parvula HOM05D005433 ORTHO05D006675 9.0e-33 144.8 217 45.2
Cc05_g11610 Coffea canephora HOM05D005433 ORTHO05D006675 1.5e-32 144.1 284 43.3
A05p34330 Brassica napus HOM05D005433 ORTHO05D006675 2.0e-32 143.7 205 49.3
THA.LOC104810456 Tarenaya hassleriana HOM05D005433 ORTHO05D006675 2.0e-32 143.7 190 47.9
TAR624G0745 Trochodendron aralioides HOM05D005433 ORTHO05D006675 2.0e-32 143.7 203 46.8
BcaB06g29536 Brassica carinata HOM05D005433 ORTHO05D006675 2.6e-32 143.3 221 47.1
C05p52110 Brassica napus HOM05D005433 ORTHO05D006675 3.4e-32 142.9 205 48.8
BolC5t33896H Brassica oleracea HOM05D005433 ORTHO05D006675 3.4e-32 142.9 205 48.8
Os02g0307800 Oryza sativa ssp. japonica HOM05D005433 ORTHO05D006675 4.5e-32 142.5 178 51.7
ECA234G3266 Erigeron canadensis HOM05D005433 ORTHO05D006675 9.9e-32 141.4 277 42.6
Peaxi162Scf00027g01311 Petunia axillaris HOM05D005433 ORTHO05D006675 2.2e-31 140.2 263 41.8
AL3G27460 Arabidopsis lyrata HOM05D005433 ORTHO05D006675 3.8e-31 139.4 198 44.4
AUR62036145 Chenopodium quinoa HOM05D005433 ORTHO05D006675 3.8e-31 139.4 250 40.8
Nitab4.5_0005232g0030 Nicotiana tabacum HOM05D005433 ORTHO05D006675 3.8e-31 139.4 267 41.2
DCAR_019573 Daucus carota HOM05D005433 ORTHO05D006675 4.9e-31 139.0 271 41.7
FAN21G1059 Fragaria x ananassa HOM05D005433 ORTHO05D006675 4.9e-31 139.0 292 42.5
PGSC0003DMG400021311 Solanum tuberosum HOM05D005433 ORTHO05D006675 6.4e-31 138.7 286 41.3
BraA05t22254Z Brassica rapa HOM05D005433 ORTHO05D006675 8.4e-31 138.3 288 40.3
CAN.G1119.17 Capsicum annuum HOM05D005433 ORTHO05D006675 8.4e-31 138.3 268 39.9
Nitab4.5_0001208g0170 Nicotiana tabacum HOM05D005433 ORTHO05D006675 8.4e-31 138.3 271 41.3
Aa31LG8G2320 Aethionema arabicum HOM05D005433 ORTHO05D006675 1.1e-30 137.9 200 47.0
Sed0015039 Sechium edule HOM05D005433 ORTHO05D006675 1.1e-30 137.9 131 64.9
Carub.0003s1475 Capsella rubella HOM05D005433 ORTHO05D006675 1.9e-30 137.1 221 43.0
Solyc10g007120.4 Solanum lycopersicum HOM05D005433 ORTHO05D006675 1.9e-30 137.1 287 40.8
Sopen10g003020 Solanum pennellii HOM05D005433 ORTHO05D006675 2.5e-30 136.7 273 41.4
AT3G15110 Arabidopsis thaliana HOM05D005433 ORTHO05D006675 3.2e-30 136.3 270 40.7
Rhsim04G0023000 Rhododendron simsii HOM05D005433 ORTHO05D006675 4.2e-30 136.0 289 39.4
Aqoxy4G00583 Aquilegia oxysepala HOM05D005433 ORTHO05D006675 1.2e-29 134.4 281 38.1
unitig_85.g27411 Utricularia gibba HOM05D005433 ORTHO05D006675 6.0e-29 132.1 270 40.0
unitig_86.g29837 Utricularia gibba HOM05D005433 ORTHO05D006675 6.0e-29 132.1 270 40.0
Zm00001eb235270 Zea mays HOM05D005433 ORTHO05D006675 3.0e-28 129.8 200 45.5
vmacro09517 Vaccinium macrocarpon HOM05D005433 ORTHO05D006675 3.9e-28 129.4 309 38.2
Lalb_Chr03g0030801 Lupinus albus HOM05D005433 ORTHO05D006675 2.8e-26 123.2 137 58.4
Thecc.07G099700 Theobroma cacao HOM05D005433 ORTHO05D006675 1.8e-25 120.6 132 58.3
SGA_v2.0_scaffold70G23696 Striga asiatica HOM05D005433 ORTHO05D006675 4.5e-24 115.9 160 49.4
Mapoly0060s0103 Marchantia polymorpha HOM05D005433 ORTHO05D006675 2.9e-23 113.2 149 46.3
Pp3c11_19700 Physcomitrium patens HOM05D005433 ORTHO05D006675 1.9e-22 110.5 175 41.7
AagrBONN_evm.TU.Sc2ySwM_368.1222 Anthoceros agrestis HOM05D005433 ORTHO05D006675 2.5e-22 110.2 152 42.8
Dinv14949 Davidia involucrata HOM05D005433 ORTHO05D006675 3.5e-21 106.3 123 56.1
Prupe.4G173400 Prunus persica HOM05D005433 ORTHO05D006675 1.3e-20 104.4 137 54.7
MD11G1256600 Malus domestica HOM05D005433 ORTHO05D006675 1.8e-17 94.0 119 55.5
AUR62019491 Chenopodium quinoa HOM05D005433 ORTHO05D006675 1.7e-15 87.4 248 32.3
Lj8A153T41 Lonicera japonica HOM05D005433 ORTHO05D006675 2.2e-15 87.0 187 40.1
SMO143G0248 Selaginella moellendorffii HOM05D009232 ORTHO05D006675 8.5e-15 85.1 140 38.6
CBR_g28819 Chara braunii HOM05D005433 ORTHO05D006675 1.4e-14 84.3 208 31.2
HPP92_027387 Vanilla planifolia HOM05D005433 ORTHO05D006675 9.4e-14 81.6 116 45.7
C09p61630 Brassica napus HOM05D005433 ORTHO05D006675 4.6e-13 79.3 117 47.0
BolC9t59001H Brassica oleracea HOM05D005433 ORTHO05D006675 4.6e-13 79.3 117 47.0
C02p31450 Brassica napus HOM05D005433 ORTHO05D006675 2.0e-11 73.9 104 51.0
MCO01G315 Micromonas commoda HOM05D005433 ORTHO05D006675 6.9e-09 65.5 158 29.1
Lsat_1_v5_gn_7_42380 Lactuca sativa HOM05D005433 ORTHO05D006675 1.5e-08 64.3 114 37.7
Oeu051094.1 Olea europaea HOM05D005433 ORTHO05D006675 3.4e-08 63.2 210 31.4
Cre03.g167400 Chlamydomonas reinhardtii HOM05D005433 ORTHO05D006675 4.5e-08 62.8 131 33.6
Lsat_1_v5_gn_0_4360 Lactuca sativa HOM05D005433 ORTHO05D006675 5.0e-07 59.3 101 38.6
EL10Ac5g11588 Beta vulgaris HOM05D005433 ORTHO05D006675 4.2e-06 56.2 80 45.0
Glyma.13G273100 Glycine max HOM05D005433 ORTHO05D006675 7.2e-06 55.5 133 33.8


User provided reference genes

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