Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19691 Trifolium pratense HOM05D004022 ORTHO05D004090 9.3e-53 209.9 105 100.0
Medtr6g042010 Medicago truncatula HOM05D004022 ORTHO05D004090 8.5e-30 133.7 114 68.4
Medtr6g041990 Medicago truncatula HOM05D004022 ORTHO05D004090 1.6e-23 112.8 91 67.0
Psat1g075360 Pisum sativum HOM05D004022 ORTHO05D004090 2.0e-23 112.5 110 66.4
Lalb_Chr19g0133591 Lupinus albus HOM05D004022 ORTHO05D004090 1.6e-12 76.3 91 56.0
TPR.G26630 Trifolium pratense HOM05D004022 ORTHO05D004090 8.0e-12 73.9 96 49.0
Lj3g0019101 Lotus japonicus HOM05D004022 ORTHO05D004090 4.0e-11 71.6 94 51.1
Phvul.005G051400 Phaseolus vulgaris HOM05D004022 ORTHO05D004090 6.8e-11 70.9 96 49.0
TPR.G2234 Trifolium pratense HOM05D004022 ORTHO05D004090 1.2e-10 70.1 96 49.0
Lalb_Chr25g0285381 Lupinus albus HOM05D004022 ORTHO05D004090 2.0e-10 69.3 106 46.2
Ca_03390_v3 Cicer arietinum L. HOM05D004022 ORTHO05D004090 7.5e-10 67.4 97 51.5
Glyma.08G176500 Glycine max HOM05D004022 ORTHO05D004090 2.2e-09 65.9 96 50.0
Medtr2g070550 Medicago truncatula HOM05D004022 ORTHO05D004090 2.2e-09 65.9 96 49.0
QL04p070436 Quercus lobata HOM05D004022 ORTHO05D004090 2.8e-09 65.5 80 47.5
QL04p070411 Quercus lobata HOM05D004022 ORTHO05D004090 1.4e-08 63.2 80 46.2
Glyma.15G249800 Glycine max HOM05D004022 ORTHO05D004090 1.8e-08 62.8 84 51.2
QL04p070376 Quercus lobata HOM05D004022 ORTHO05D004090 3.1e-08 62.0 80 45.0
Lj3g0000459 Lotus japonicus HOM05D004022 ORTHO05D004090 1.2e-07 60.1 89 50.6
arahy.Tifrunner.gnm1.ann1.I20P02 Arachis hypogaea HOM05D004022 ORTHO05D004090 2.9e-06 55.5 47 61.7
Duzib268G0389 Durio zibethinus HOM05D004022 ORTHO05D004090 2.9e-06 55.5 98 40.8
Potri.011G095900 Populus trichocarpa HOM05D004022 ORTHO05D004090 2.9e-06 55.5 90 43.3
arahy.Tifrunner.gnm1.ann1.NFB54Z Arachis hypogaea HOM05D004022 ORTHO05D004090 3.8e-06 55.1 43 72.1
PGSC0003DMG400027649 Solanum tuberosum HOM05D004022 ORTHO05D004090 3.8e-06 55.1 89 47.2
Nitab4.5_0001924g0010 Nicotiana tabacum HOM05D004022 ORTHO05D004090 5.0e-06 54.7 97 38.1
Nitab4.5_0005080g0020 Nicotiana tabacum HOM05D004022 ORTHO05D004090 5.0e-06 54.7 102 39.2
DCAR_021057 Daucus carota HOM05D004022 ORTHO05D004090 6.6e-06 54.3 91 39.6
ECA236G3547 Erigeron canadensis HOM05D004022 ORTHO05D004090 6.6e-06 54.3 96 39.6
Sopen07g029950 Solanum pennellii HOM05D004022 ORTHO05D004090 8.6e-06 53.9 91 44.0
TWI38G0355 Tripterygium wilfordii HOM05D004022 ORTHO05D004090 8.6e-06 53.9 88 42.0


User provided reference genes

Program Settings