Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 2.6e-152 542.0 268 100.0
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 6.8e-116 421.0 271 81.5
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 4.7e-109 398.3 280 76.4
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 3.8e-90 335.5 256 71.5
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 9.0e-76 287.7 272 59.9
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 1.4e-68 263.8 268 58.6
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 2.1e-64 250.0 271 56.1
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 2.5e-62 243.0 271 55.0
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 5.7e-62 241.9 265 52.5
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 1.6e-61 240.4 166 72.3
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 2.2e-61 240.0 276 53.3
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 2.8e-61 239.6 266 53.8
Medtr6g040180 Medicago truncatula HOM05D007372 ORTHO05D009318 9.4e-49 198.0 127 81.1
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 5.3e-44 182.2 129 73.6
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 3.2e-41 172.9 264 41.7
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 7.2e-41 171.8 265 42.3
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 9.4e-41 171.4 278 41.0
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 1.2e-40 171.0 272 41.2
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 2.0e-38 163.7 276 39.5
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 3.3e-38 162.9 266 39.1
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 4.4e-38 162.5 268 39.2
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 7.0e-36 155.2 111 73.0
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 9.1e-36 154.8 273 41.4
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 1.2e-35 154.5 281 39.9
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 2.6e-35 153.3 281 39.1
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 1.3e-34 151.0 277 38.3
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 1.7e-34 150.6 270 40.7
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 2.2e-34 150.2 289 38.4
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 6.5e-34 148.7 263 39.9
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 8.5e-34 148.3 277 39.7
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 1.9e-33 147.1 293 37.2
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 5.5e-33 145.6 305 37.0
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 2.7e-32 143.3 305 38.4
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 2.7e-32 143.3 286 37.1
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 2.7e-32 143.3 258 39.9
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 2.7e-32 143.3 277 37.5
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 4.7e-32 142.5 316 37.7
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 6.1e-32 142.1 355 31.5
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 3.0e-31 139.8 271 38.4
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 4.0e-31 139.4 283 39.2
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 4.0e-31 139.4 247 37.2
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 5.2e-31 139.0 271 36.5
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 2.6e-30 136.7 240 40.0
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 4.4e-30 136.0 263 38.8
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 5.7e-30 135.6 289 35.6
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 7.5e-30 135.2 154 51.9
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 2.2e-29 133.7 293 37.5
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 2.8e-29 133.3 293 37.5
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 3.7e-29 132.9 304 33.6
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 6.3e-29 132.1 285 37.2
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 1.8e-28 130.6 296 34.1
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 1.2e-27 127.9 307 36.2
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 3.5e-27 126.3 273 35.9
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.0e-26 124.8 304 33.6
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 2.2e-26 123.6 301 33.2
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 3.8e-26 122.9 276 35.5
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 3.8e-26 122.9 193 44.6
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 6.5e-26 122.1 305 33.1
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 8.5e-26 121.7 266 36.8
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 1.9e-25 120.6 292 37.0
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 1.9e-25 120.6 296 37.2
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 4.2e-25 119.4 263 35.4
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 7.2e-25 118.6 145 51.0
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 7.2e-25 118.6 309 31.4
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 1.6e-24 117.5 319 32.0
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 1.6e-24 117.5 265 33.2
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 2.7e-24 116.7 107 60.7
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 4.7e-24 115.9 252 34.9
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 1.0e-23 114.8 326 31.3
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 1.8e-23 114.0 309 32.0
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 3.0e-23 113.2 119 55.5
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 3.0e-23 113.2 283 33.2
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 3.0e-23 113.2 257 36.6
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.2e-22 111.3 325 31.1
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 2.6e-22 110.2 259 34.4
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 5.7e-22 109.0 180 42.2
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 1.7e-21 107.5 271 32.5
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 2.8e-21 106.7 250 32.0
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 3.7e-21 106.3 294 30.6
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 1.8e-20 104.0 201 38.3
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 1.8e-20 104.0 263 33.8
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 9.1e-20 101.7 320 29.7
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 1.2e-19 101.3 159 44.0
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 1.0e-18 98.2 285 30.5
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 5.0e-18 95.9 172 37.2
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 8.6e-18 95.1 128 43.8
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 1.1e-17 94.7 143 41.3
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 1.9e-17 94.0 62 72.6
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 3.3e-17 93.2 126 46.0
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 7.2e-17 92.0 311 29.3
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 2.1e-16 90.5 150 38.0
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 2.6e-14 83.6 274 29.6
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 9.8e-14 81.6 231 30.7
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 2.2e-13 80.5 160 33.1
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 2.8e-13 80.1 222 31.1
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 2.4e-12 77.0 84 48.8
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.3e-10 71.2 84 46.4
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 1.1e-09 68.2 109 37.6
SpUn0095_0010 Schrenkiella parvula HOM05D007372 ORTHO05D009318 1.6e-08 64.3 169 28.4
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 1.0e-07 61.6 279 27.6


User provided reference genes

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