Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19618 Trifolium pratense HOM05D004964 ORTHO05D005918 4.2e-141 504.6 242 100.0
TPR.G17496 Trifolium pratense HOM05D004964 ORTHO05D005918 5.1e-54 215.3 132 76.5
TPR.G33137 Trifolium pratense HOM05D004964 ORTHO05D005918 2.2e-52 209.9 132 74.2
Ca_14064_v3 Cicer arietinum L. HOM05D004964 ORTHO05D005918 1.5e-50 203.8 132 72.7
Medtr8g006785 Medicago truncatula HOM05D004964 ORTHO05D005918 2.1e-47 193.4 126 72.2
Phvul.010G051000 Phaseolus vulgaris HOM05D004964 ORTHO05D005918 3.9e-46 189.1 136 65.4
VMungo0331G1958 Vigna mungo HOM05D004964 ORTHO05D005918 2.0e-42 176.8 136 62.5
Glyma.07G113400 Glycine max HOM05D004964 ORTHO05D005918 7.2e-40 168.3 101 75.2
Lj3g0015193 Lotus japonicus HOM05D004964 ORTHO05D005918 3.9e-38 162.5 129 62.0
Psat4g225120 Pisum sativum HOM05D004964 ORTHO05D005918 1.1e-37 161.0 100 74.0
Glyma.03G113500 Glycine max HOM05D004964 ORTHO05D005918 4.4e-37 159.1 133 63.9
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea HOM05D004964 ORTHO05D005918 3.8e-33 146.0 112 60.7
Lalb_Chr03g0040321 Lupinus albus HOM05D004964 ORTHO05D005918 6.5e-33 145.2 112 59.8
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea HOM05D004964 ORTHO05D005918 7.2e-32 141.7 112 58.9
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 1.8e-27 127.1 103 56.3
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 3.1e-27 126.3 131 51.9
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 7.0e-27 125.2 124 50.0
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 1.2e-26 124.4 137 43.8
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 2.0e-26 123.6 136 44.9
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 4.5e-26 122.5 131 48.9
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 3.8e-25 119.4 123 46.3
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 6.5e-25 118.6 111 49.5
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 8.5e-25 118.2 147 41.5
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 1.1e-24 117.9 95 55.8
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 1.9e-24 117.1 137 41.6
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 3.2e-24 116.3 140 42.9
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 9.4e-24 114.8 130 44.6
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 9.4e-24 114.8 130 44.6
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 9.4e-24 114.8 155 39.4
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 1.2e-23 114.4 111 49.5
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 1.2e-23 114.4 114 48.2
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.6e-23 114.0 147 40.8
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.1e-23 113.6 147 40.8
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 2.7e-23 113.2 147 40.8
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 3.6e-23 112.8 111 47.7
QL03p030145 Quercus lobata HOM05D004964 ORTHO05D005918 1.0e-22 111.3 97 51.5
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 1.4e-22 110.9 119 45.4
QL03p030283 Quercus lobata HOM05D004964 ORTHO05D005918 1.8e-22 110.5 95 53.7
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 2.3e-22 110.2 117 41.9
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 3.4e-21 106.3 103 50.5
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 4.4e-21 105.9 114 47.4
Duzib106G0302 Durio zibethinus HOM05D004964 ORTHO05D005918 5.7e-21 105.5 103 49.5
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 1.7e-20 104.0 114 46.5
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.2e-20 103.6 161 37.3
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 4.8e-20 102.4 136 35.3
AT1G10095 Arabidopsis thaliana HOM05D004964 ORTHO05D005918 6.3e-20 102.1 131 42.0
Ciclev10020293m.g Citrus clementina HOM05D004964 ORTHO05D005918 3.1e-19 99.8 118 41.5
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 3.1e-19 99.8 134 41.0
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 4.1e-19 99.4 103 44.7
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 7.0e-19 98.6 97 44.3
Haze_04423 Corylus avellana HOM05D004964 ORTHO05D005918 1.2e-18 97.8 105 48.6
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 1.6e-18 97.4 149 36.2
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 2.7e-18 96.7 118 43.2
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 2.7e-18 96.7 109 43.1
MBI07_g16903_MAGBIO Magnolia biondii HOM05D004964 ORTHO05D005918 2.7e-18 96.7 121 41.3
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 3.5e-18 96.3 103 43.7
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 4.5e-18 95.9 109 42.2
AL1G47570 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 5.9e-18 95.5 103 43.7
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 5.9e-18 95.5 109 41.3
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 7.7e-18 95.1 126 40.5
CARHR222860 Cardamine hirsuta HOM05D004964 ORTHO05D005918 7.7e-18 95.1 115 42.6
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 7.7e-18 95.1 113 44.2
Sc10g0001190 Simmondsia chinensis HOM05D004964 ORTHO05D005918 7.7e-18 95.1 104 48.1
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 1.0e-17 94.7 109 42.2
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 1.3e-17 94.4 109 42.2
ClCG11G010620 Citrullus lanatus HOM05D004964 ORTHO05D005918 1.7e-17 94.0 129 39.5
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 1.7e-17 94.0 110 40.0
Sp2g09220 Schrenkiella parvula HOM05D004964 ORTHO05D005918 1.7e-17 94.0 132 37.1
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 2.2e-17 93.6 116 40.5
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 2.2e-17 93.6 116 40.5
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 2.2e-17 93.6 123 41.5
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 2.9e-17 93.2 146 37.0
BcaB07g30949 Brassica carinata HOM05D004964 ORTHO05D005918 3.8e-17 92.8 113 42.5
BraA09t37709Z Brassica rapa HOM05D004964 ORTHO05D005918 6.5e-17 92.0 113 42.5
AUR62008995 Chenopodium quinoa HOM05D004964 ORTHO05D005918 6.5e-17 92.0 111 40.5
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 6.5e-17 92.0 113 39.8
PSO210G1919 Papaver somniferum HOM05D004964 ORTHO05D005918 6.5e-17 92.0 120 38.3
QL03p030376 Quercus lobata HOM05D004964 ORTHO05D005918 8.5e-17 91.7 85 48.2
A09p21080 Brassica napus HOM05D004964 ORTHO05D005918 1.1e-16 91.3 113 41.6
Thhalv10000880m.g Eutrema salsugineum HOM05D004964 ORTHO05D005918 1.1e-16 91.3 113 41.6
Aa31LG1G4790 Aethionema arabicum HOM05D004964 ORTHO05D005918 1.5e-16 90.9 100 43.0
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 1.5e-16 90.9 109 41.3
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 2.5e-16 90.1 126 39.7
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 2.5e-16 90.1 126 39.7
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 2.5e-16 90.1 126 39.7
AUR62023306 Chenopodium quinoa HOM05D004964 ORTHO05D005918 2.5e-16 90.1 117 40.2
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 7.2e-16 88.6 94 44.7
MSTRG.14348 Avicennia marina HOM05D004964 ORTHO05D005918 1.2e-15 87.8 112 38.4
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 1.2e-15 87.8 100 45.0
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 3.6e-15 86.3 95 47.4
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 4.7e-15 85.9 103 41.7
SalBow6G5984 Salvia bowleyana HOM05D004964 ORTHO05D005918 6.1e-15 85.5 102 41.2
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 6.1e-15 85.5 127 33.9
EL10Ac2g04577 Beta vulgaris HOM05D004964 ORTHO05D005918 2.3e-14 83.6 95 40.0
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 2.3e-14 83.6 105 40.0
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 3.0e-14 83.2 111 36.9
ATR0736G161 Amborella trichopoda HOM05D004964 ORTHO05D005918 4.0e-14 82.8 116 37.9
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 6.8e-14 82.0 107 37.4
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 6.8e-14 82.0 107 37.4
Aqoxy5G02134 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 1.2e-13 81.3 97 37.1
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 4.4e-13 79.3 114 36.0
CDE04G0768 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 5.7e-13 79.0 116 31.9
Aqoxy4G00649 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 1.3e-12 77.8 119 32.8
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 1.7e-12 77.4 95 41.1
AL1G20660 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 2.8e-12 76.6 94 44.7
MD12G1248000 Malus domestica HOM05D004964 ORTHO05D005918 4.1e-11 72.8 142 31.0
Hund13719 Selenicereus undatus HOM05D004964 ORTHO05D005918 9.2e-11 71.6 124 33.9
HPP92_003061 Vanilla planifolia HOM05D004964 ORTHO05D005918 1.2e-10 71.2 122 32.8
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 5.9e-10 68.9 104 37.5
PSO210G0659 Papaver somniferum HOM05D004964 ORTHO05D005918 2.9e-09 66.6 82 37.8
Ah.10g037790 Amaranthus hybridus HOM05D004964 ORTHO05D005918 1.5e-08 64.3 94 35.1
BolC9t55571H Brassica oleracea HOM05D004964 ORTHO05D005918 1.9e-08 63.9 100 31.0
BcaC04g21837 Brassica carinata HOM05D004964 ORTHO05D005918 8.9e-06 55.1 100 30.0


User provided reference genes

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