Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G196 Trifolium pratense HOM05D004547 ORTHO05D005133 1.0e-61 240.0 124 100.0
Ca_19628_v3 Cicer arietinum L. HOM05D004547 ORTHO05D005133 2.8e-56 221.9 129 91.5
Medtr0004s0490 Medicago truncatula HOM05D004547 ORTHO05D005133 4.1e-55 218.0 126 91.3
Glyma.09G224000 Glycine max HOM05D004547 ORTHO05D005133 1.0e-53 213.4 127 89.8
Lj3g0004511 Lotus japonicus HOM05D004547 ORTHO05D005133 1.3e-53 213.0 129 88.4
Glyma.12G013000 Glycine max HOM05D004547 ORTHO05D005133 1.7e-53 212.6 127 89.0
VMungo1127G1242 Vigna mungo HOM05D004547 ORTHO05D005133 3.8e-53 211.5 127 88.2
arahy.Tifrunner.gnm1.ann1.TL2CDN Arachis hypogaea HOM05D004547 ORTHO05D005133 6.5e-53 210.7 125 88.8
Phvul.011G016000 Phaseolus vulgaris HOM05D004547 ORTHO05D005133 1.9e-52 209.1 127 87.4
Lalb_Chr03g0024271 Lupinus albus HOM05D004547 ORTHO05D005133 7.2e-52 207.2 124 87.1
arahy.Tifrunner.gnm1.ann1.J7T2TK Arachis hypogaea HOM05D004547 ORTHO05D005133 1.2e-51 206.5 125 87.2
Dinv28576 Davidia involucrata HOM05D004547 ORTHO05D005133 7.9e-51 203.8 125 84.8
COL.COLO4_14122 Corchorus olitorius HOM05D004547 ORTHO05D005133 2.3e-50 202.2 129 82.2
Medtr6g005610 Medicago truncatula HOM05D004547 ORTHO05D005133 2.3e-50 202.2 125 84.8
QL09p005748 Quercus lobata HOM05D004547 ORTHO05D005133 8.7e-50 200.3 127 82.7
GSVIVG01018659001 Vitis vinifera HOM05D004547 ORTHO05D005133 1.5e-49 199.5 126 81.0
Hma1.2p1_0432F.1_g151750 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 2.5e-49 198.7 125 81.6
Hma1.2p1_0432F.1_g151760 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 2.5e-49 198.7 125 81.6
Cfa008167 Carpinus fangiana HOM05D004547 ORTHO05D005133 4.3e-49 198.0 127 83.5
Actinidia31780 Actinidia chinensis HOM05D004547 ORTHO05D005133 5.7e-49 197.6 125 82.4
PGR042G2008 Punica granatum HOM05D004547 ORTHO05D005133 7.4e-49 197.2 125 81.6
Psat0s2825g0040 Pisum sativum HOM05D004547 ORTHO05D005133 9.7e-49 196.8 114 92.1
Thecc.03G155600 Theobroma cacao HOM05D004547 ORTHO05D005133 9.7e-49 196.8 129 79.8
CSS0028755 Camellia sinensis var. sinensis HOM05D004547 ORTHO05D005133 1.6e-48 196.1 124 82.3
Duzib205G1908 Durio zibethinus HOM05D004547 ORTHO05D005133 2.8e-48 195.3 129 80.6
Potri.003G109100 Populus trichocarpa HOM05D004547 ORTHO05D005133 3.7e-48 194.9 127 78.7
Sed0001089 Sechium edule HOM05D004547 ORTHO05D005133 3.7e-48 194.9 125 80.0
Atru.chr1.728 Acer truncatum HOM05D004547 ORTHO05D005133 4.8e-48 194.5 127 81.1
Gorai.008G216000 Gossypium raimondii HOM05D004547 ORTHO05D005133 4.8e-48 194.5 128 82.0
CsaV3_3G016130 Cucumis sativus L. HOM05D004547 ORTHO05D005133 6.3e-48 194.1 125 80.0
Eucgr.A02893 Eucalyptus grandis HOM05D004547 ORTHO05D005133 6.3e-48 194.1 124 80.6
MELO3C006811.2 Cucumis melo HOM05D004547 ORTHO05D005133 8.2e-48 193.7 125 80.0
Sabra03G0075600 Salix brachista HOM05D004547 ORTHO05D005133 8.2e-48 193.7 127 78.7
Ciclev10004313m.g Citrus clementina HOM05D004547 ORTHO05D005133 1.1e-47 193.4 125 81.6
CiPaw.03G093300 Carya illinoinensis HOM05D004547 ORTHO05D005133 1.4e-47 193.0 127 79.5
Hund13892 Selenicereus undatus HOM05D004547 ORTHO05D005133 1.4e-47 193.0 127 78.0
PSO266G0090 Papaver somniferum HOM05D004547 ORTHO05D005133 1.8e-47 192.6 121 79.3
PSO384G4058 Papaver somniferum HOM05D004547 ORTHO05D005133 1.8e-47 192.6 124 77.4
Gohir.D12G200900 Gossypium hirsutum HOM05D004547 ORTHO05D005133 2.4e-47 192.2 128 81.2
CANSAT56G3837 Cannabis sativa HOM05D004547 ORTHO05D005133 3.1e-47 191.8 129 79.8
ClCG05G007360 Citrullus lanatus HOM05D004547 ORTHO05D005133 6.9e-47 190.7 124 79.0
Manes.06G134600 Manihot esculenta HOM05D004547 ORTHO05D005133 6.9e-47 190.7 125 79.2
TAR375G0699 Trochodendron aralioides HOM05D004547 ORTHO05D005133 9.0e-47 190.3 125 79.2
Gohir.A12G198300 Gossypium hirsutum HOM05D004547 ORTHO05D005133 1.2e-46 189.9 128 79.7
Sed0008837 Sechium edule HOM05D004547 ORTHO05D005133 1.2e-46 189.9 125 78.4
Cpa.g.sc3.324 Carica papaya HOM05D004547 ORTHO05D005133 3.4e-46 188.3 125 78.4
TAR374G0871 Trochodendron aralioides HOM05D004547 ORTHO05D005133 7.7e-46 187.2 125 76.8
Sopen05g002910 Solanum pennellii HOM05D004547 ORTHO05D005133 1.0e-45 186.8 124 77.4
Lj1A979T84 Lonicera japonica HOM05D004547 ORTHO05D005133 1.3e-45 186.4 128 75.8
PGSC0003DMG400017618 Solanum tuberosum HOM05D004547 ORTHO05D005133 1.3e-45 186.4 124 77.4
MSTRG.8826 Avicennia marina HOM05D004547 ORTHO05D005133 2.2e-45 185.7 125 76.8
EL10Ac2g04890 Beta vulgaris HOM05D004547 ORTHO05D005133 2.2e-45 185.7 125 76.8
Cc02_g04280 Coffea canephora HOM05D004547 ORTHO05D005133 2.9e-45 185.3 127 75.6
Sc14g0005530 Simmondsia chinensis HOM05D004547 ORTHO05D005133 3.8e-45 184.9 121 79.3
MD01G1182800 Malus domestica HOM05D004547 ORTHO05D005133 5.0e-45 184.5 130 72.3
Nn1g01023 Nelumbo nucifera HOM05D004547 ORTHO05D005133 5.0e-45 184.5 111 83.8
Migut.F00479 Erythranthe guttata HOM05D004547 ORTHO05D005133 8.5e-45 183.7 119 79.8
RcHm_v2.0_Chr1g0374281 Rosa chinensis HOM05D004547 ORTHO05D005133 8.5e-45 183.7 122 75.4
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 8.5e-45 183.7 127 75.6
Sp6g13590 Schrenkiella parvula HOM05D004547 ORTHO05D005133 1.1e-44 183.3 127 75.6
FvH4_7g27490 Fragaria vesca HOM05D004547 ORTHO05D005133 1.9e-44 182.6 122 75.4
AT5G51430 Arabidopsis thaliana HOM05D004547 ORTHO05D005133 2.5e-44 182.2 127 76.4
Rhsim03G0167200 Rhododendron simsii HOM05D004547 ORTHO05D005133 2.5e-44 182.2 125 78.4
AL8G25720 Arabidopsis lyrata HOM05D004547 ORTHO05D005133 3.2e-44 181.8 127 75.6
Thhalv10012691m.g Eutrema salsugineum HOM05D004547 ORTHO05D005133 7.2e-44 180.6 127 75.6
FAN06G1216 Fragaria x ananassa HOM05D004547 ORTHO05D005133 7.2e-44 180.6 115 80.0
FAN06G1879 Fragaria x ananassa HOM05D004547 ORTHO05D005133 7.2e-44 180.6 115 80.0
FAN10G1756 Fragaria x ananassa HOM05D004547 ORTHO05D005133 7.2e-44 180.6 115 80.0
THA.LOC104811522 Tarenaya hassleriana HOM05D004547 ORTHO05D005133 7.2e-44 180.6 127 75.6
BcaB08g35501 Brassica carinata HOM05D004547 ORTHO05D005133 9.4e-44 180.3 121 78.5
CARHR264160 Cardamine hirsuta HOM05D004547 ORTHO05D005133 9.4e-44 180.3 114 81.6
FAN03G1184 Fragaria x ananassa HOM05D004547 ORTHO05D005133 9.4e-44 180.3 122 74.6
SalBow5G5604 Salvia bowleyana HOM05D004547 ORTHO05D005133 1.6e-43 179.5 124 74.2
CAN.G16.15 Capsicum annuum HOM05D004547 ORTHO05D005133 2.1e-43 179.1 125 73.6
Nitab4.5_0004665g0060 Nicotiana tabacum HOM05D004547 ORTHO05D005133 2.1e-43 179.1 126 74.6
SalBow5G1900 Salvia bowleyana HOM05D004547 ORTHO05D005133 2.1e-43 179.1 124 74.2
FAN01G0567 Fragaria x ananassa HOM05D004547 ORTHO05D005133 2.7e-43 178.7 122 73.8
DCAR_020189 Daucus carota HOM05D004547 ORTHO05D005133 4.6e-43 177.9 115 76.5
Peaxi162Scf00023g01214 Petunia axillaris HOM05D004547 ORTHO05D005133 4.6e-43 177.9 126 75.4
C02p20480 Brassica napus HOM05D004547 ORTHO05D005133 6.1e-43 177.6 128 75.0
BraA02t06300Z Brassica rapa HOM05D004547 ORTHO05D005133 6.1e-43 177.6 130 74.6
ECA232G2122 Erigeron canadensis HOM05D004547 ORTHO05D005133 6.1e-43 177.6 129 71.3
BcaC04g20676 Brassica carinata HOM05D004547 ORTHO05D005133 7.9e-43 177.2 111 81.1
Zm00001eb389950 Zea mays HOM05D004547 ORTHO05D005133 7.9e-43 177.2 113 76.1
Ah.10g036230 Amaranthus hybridus HOM05D004547 ORTHO05D005133 1.0e-42 176.8 125 73.6
Carub.0008s1145 Capsella rubella HOM05D004547 ORTHO05D005133 1.0e-42 176.8 114 78.1
AUR62012299 Chenopodium quinoa HOM05D004547 ORTHO05D005133 1.0e-42 176.8 124 72.6
A02p12350 Brassica napus HOM05D004547 ORTHO05D005133 1.4e-42 176.4 130 73.8
Prupe.2G277000 Prunus persica HOM05D004547 ORTHO05D005133 1.4e-42 176.4 128 71.1
AUR62022938 Chenopodium quinoa HOM05D004547 ORTHO05D005133 2.3e-42 175.6 124 72.6
Aa31sc202G10 Aethionema arabicum HOM05D004547 ORTHO05D005133 6.7e-42 174.1 124 74.2
Lsat_1_v5_gn_9_52061 Lactuca sativa HOM05D004547 ORTHO05D005133 8.8e-42 173.7 125 71.2
BraA10t43010Z Brassica rapa HOM05D004547 ORTHO05D005133 1.1e-41 173.3 112 80.4
A10p09340 Brassica napus HOM05D004547 ORTHO05D005133 1.5e-41 172.9 112 80.4
Aqoxy2G03231 Aquilegia oxysepala HOM05D004547 ORTHO05D005133 2.0e-41 172.6 123 72.4
C09p40720 Brassica napus HOM05D004547 ORTHO05D005133 2.0e-41 172.6 112 80.4
BolC9t56951H Brassica oleracea HOM05D004547 ORTHO05D005133 2.0e-41 172.6 112 80.4
Nitab4.5_0019601g0010 Nicotiana tabacum HOM05D004547 ORTHO05D005133 7.4e-41 170.6 124 72.6
HanXRQChr16g0512771 Helianthus annuus HOM05D004547 ORTHO05D005133 9.7e-41 170.2 123 71.5
Medtr6g005670 Medicago truncatula HOM05D004547 ORTHO05D005133 1.7e-40 169.5 125 76.0
Oeu022486.1 Olea europaea HOM05D004547 ORTHO05D005133 3.7e-40 168.3 124 72.6
SHI14003 Sapria himalayana HOM05D004547 ORTHO05D000023 2.0e-38 162.5 106 74.5
ATR0317G078 Amborella trichopoda HOM05D004547 ORTHO05D005133 5.9e-38 161.0 122 68.9
unitig_37.g11930 Utricularia gibba HOM05D004547 ORTHO05D005133 3.8e-37 158.3 106 74.5
HPP92_005319 Vanilla planifolia HOM05D004547 ORTHO05D005133 3.8e-37 158.3 121 66.1
SEGI_08321 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 1.4e-36 156.4 100 75.0
TWI39G0203 Tripterygium wilfordii HOM05D004547 ORTHO05D005133 1.4e-36 156.4 127 67.7
TPR.G20262 Trifolium pratense HOM05D004547 ORTHO05D005133 6.1e-35 151.0 80 97.5
vmacro06799 Vaccinium macrocarpon HOM05D004547 ORTHO05D005133 7.9e-35 150.6 87 89.7
Mapoly0007s0274 Marchantia polymorpha HOM05D004547 ORTHO05D005133 1.5e-33 146.4 100 70.0
QL10p003704 Quercus lobata HOM05D004547 ORTHO05D005133 2.6e-33 145.6 89 82.0
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 9.7e-33 143.7 104 67.3
Pp3c7_60 Physcomitrium patens HOM05D004547 ORTHO05D005133 4.1e-31 138.3 100 66.0
CBR_g31542 Chara braunii HOM05D004547 ORTHO05D005133 1.1e-28 130.2 106 60.4
SMO134G0015 Selaginella moellendorffii HOM05D004547 ORTHO05D005133 1.5e-28 129.8 100 62.0
CDE04G2539 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 1.2e-27 126.7 122 56.6
CDE04G0004 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 3.0e-26 122.1 77 79.2
MD07G1253700 Malus domestica HOM05D004547 ORTHO05D005133 1.8e-23 112.8 60 93.3
Os06g0669600 Oryza sativa ssp. japonica HOM05D004547 ORTHO05D005133 5.9e-22 107.8 60 88.3
Psat7g163200 Pisum sativum HOM05D004547 ORTHO05D005133 1.3e-16 90.1 91 61.5
Cre02.g086700 Chlamydomonas reinhardtii HOM05D004547 ORTHO05D005133 3.8e-13 78.6 98 43.9
PRCOL_00005609 Prasinoderma coloniale HOM05D004547 ORTHO05D005133 8.5e-13 77.4 97 41.2


User provided reference genes

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