Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 3.7e-253 877.9 486 100.0
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 1.5e-174 616.7 501 73.5
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 1.5e-169 600.1 497 73.4
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 5.5e-140 501.9 500 60.8
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 3.9e-138 495.7 509 58.3
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 1.7e-120 437.2 475 53.9
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 4.1e-119 432.6 508 51.8
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 2.0e-113 413.7 501 50.1
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 8.0e-107 391.7 592 44.4
Ca_08983_v3 Cicer arietinum L. HOM05D005512 ORTHO05D006716 3.2e-103 379.8 445 57.8
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 5.9e-102 375.6 472 49.6
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 1.1e-66 258.5 499 36.7
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 9.0e-66 255.4 505 37.2
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.0e-65 254.2 492 36.8
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 9.9e-65 251.9 504 36.5
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.9e-64 250.4 501 36.3
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.2e-63 246.5 502 36.5
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.7e-62 243.8 509 36.1
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 6.0e-62 242.7 532 38.9
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 1.1e-60 238.4 503 41.2
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.8e-59 233.0 533 34.1
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 1.8e-58 231.1 506 37.2
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.2e-57 228.4 495 35.8
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 3.4e-57 226.9 493 36.7
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 1.1e-55 221.9 513 35.7
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 9.3e-55 218.8 497 34.6
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 3.0e-53 213.8 395 38.2
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 2.8e-51 207.2 488 34.6
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 3.4e-49 200.3 513 35.3
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 4.5e-49 199.9 519 33.7
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 4.5e-49 199.9 447 35.1
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 2.2e-48 197.6 533 34.0
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 3.2e-47 193.7 483 33.5
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 3.9e-45 186.8 468 34.0
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 5.1e-45 186.4 514 32.9
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 2.0e-41 174.5 129 66.7
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 2.6e-41 174.1 394 35.5
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 5.9e-41 172.9 516 31.6
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 1.7e-40 171.4 485 34.6
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 1.1e-39 168.7 128 65.6
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 3.6e-38 163.7 526 31.7
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 5.1e-37 159.8 401 32.7
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 4.3e-36 156.8 408 32.1
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 2.8e-35 154.1 398 31.7
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 4.8e-35 153.3 477 31.2
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 1.1e-34 152.1 392 33.7
Eucgr.K02060 Eucalyptus grandis HOM05D005512 ORTHO05D006716 6.9e-34 149.4 311 36.7
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 9.1e-34 149.1 525 31.4
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 2.6e-33 147.5 390 32.8
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 4.5e-33 146.7 500 29.2
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 5.9e-33 146.4 533 32.1
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.7e-32 144.8 401 31.2
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 1.4e-31 141.7 499 29.3
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 3.9e-29 133.7 505 29.3
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 6.3e-27 126.3 491 27.5
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 1.4e-26 125.2 482 26.6
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 1.4e-26 125.2 542 28.8
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 3.1e-26 124.0 398 28.1
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 4.1e-26 123.6 487 27.9
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 7.0e-26 122.9 479 27.8
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 1.2e-25 122.1 371 29.1
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 2.0e-25 121.3 355 33.0
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 3.4e-25 120.6 486 26.7
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 4.5e-25 120.2 504 27.2
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 1.0e-24 119.0 494 27.1
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 2.9e-24 117.5 481 27.0
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.1e-23 115.5 355 29.9
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 1.9e-23 114.8 481 26.6
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 1.9e-23 114.8 477 27.9
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 5.5e-23 113.2 423 28.1
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 2.1e-22 111.3 470 29.1
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 4.7e-22 110.2 458 27.3
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 6.1e-22 109.8 494 26.3
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 1.0e-21 109.0 422 27.5
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 1.8e-21 108.2 477 27.0
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 2.3e-21 107.8 437 29.1
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 8.8e-21 105.9 489 26.6
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 2.6e-20 104.4 372 27.4
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.3e-19 102.1 374 29.4
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 4.8e-19 100.1 362 28.2
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 2.6e-17 94.4 457 25.8
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 2.6e-17 94.4 369 29.8
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 4.5e-17 93.6 371 28.3
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 1.0e-16 92.4 363 27.8
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 1.0e-16 92.4 363 27.8
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 1.7e-16 91.7 353 26.6
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 6.5e-16 89.7 278 28.8
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.1e-15 89.0 403 25.6
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 1.5e-15 88.6 298 29.9
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 1.6e-14 85.1 369 27.9
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 1.4e-13 82.0 369 26.0
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 2.3e-13 81.3 365 28.5
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 5.2e-13 80.1 455 26.2
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 5.2e-13 80.1 298 29.5
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 5.2e-13 80.1 333 29.1
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 6.7e-13 79.7 371 25.9
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.0e-12 78.2 429 27.5
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.1e-10 72.4 401 23.7
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 1.8e-10 71.6 321 24.6
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 2.4e-10 71.2 353 25.5
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 1.6e-06 58.5 189 29.6
Atru.chr8.1591 Acer truncatum HOM05D005512 ORTHO05D006716 2.1e-06 58.2 70 47.1


User provided reference genes

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