Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 0.0e+00 1184.9 609 100.0
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 2.0e-304 1048.5 611 89.2
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 1.9e-299 1031.9 626 84.3
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 3.6e-298 1027.7 611 85.8
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 1.6e-266 922.5 611 76.8
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 1.1e-249 866.7 612 75.0
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 2.9e-247 858.6 614 74.8
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 4.2e-246 854.7 609 74.4
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 2.5e-235 818.9 606 69.1
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 1.7e-231 806.2 613 69.8
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 2.7e-229 798.9 613 70.1
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 3.3e-198 695.7 609 60.1
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 2.0e-195 686.4 623 60.5
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 2.9e-194 682.6 613 59.4
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 7.8e-192 674.5 617 58.5
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 2.5e-190 669.5 613 59.1
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 1.2e-189 667.2 621 57.8
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 6.8e-188 661.4 623 57.6
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 8.9e-188 661.0 612 57.5
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 8.9e-188 661.0 613 57.4
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 2.0e-187 659.8 618 56.0
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 6.4e-186 654.8 626 56.5
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 1.4e-185 653.7 650 54.9
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 1.9e-185 653.3 609 55.8
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 4.1e-185 652.1 622 55.6
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 5.4e-185 651.7 618 56.1
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 7.8e-184 647.9 628 56.2
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 2.1e-181 639.8 622 55.9
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 3.6e-181 639.0 568 57.7
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 8.1e-181 637.9 616 55.2
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 1.5e-179 633.6 616 55.2
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 2.0e-179 633.3 616 55.0
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 2.6e-179 632.9 621 57.0
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.9e-178 629.4 618 56.5
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 3.7e-178 629.0 613 54.5
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 3.7e-178 629.0 613 54.6
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 2.4e-177 626.3 648 53.4
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 7.1e-177 624.8 567 57.7
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 2.1e-176 623.2 640 54.5
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 7.8e-176 621.3 637 55.6
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.3e-175 619.8 617 56.4
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 1.2e-173 614.0 591 56.0
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 4.0e-172 609.0 611 53.5
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 6.8e-172 608.2 614 53.9
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 6.4e-170 601.7 619 55.1
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 3.9e-167 592.4 531 56.7
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 8.6e-167 591.3 616 52.3
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 1.4e-164 583.9 570 54.4
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 5.2e-164 582.0 618 52.6
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 3.4e-163 579.3 567 54.1
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 8.4e-162 574.7 618 51.9
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 7.8e-160 568.2 519 59.7
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 1.0e-159 567.8 616 50.3
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.7e-159 567.0 574 52.1
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 3.0e-159 566.2 614 52.1
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.5e-158 563.9 567 54.3
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 2.5e-158 563.1 603 51.6
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 4.3e-158 562.4 651 50.4
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 5.6e-158 562.0 569 53.3
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 5.6e-158 562.0 600 52.3
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.3e-157 560.8 618 49.5
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 1.6e-157 560.5 559 54.0
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 1.6e-157 560.5 631 49.4
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 5.3e-156 555.4 579 52.8
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 9.0e-156 554.7 616 50.5
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 2.0e-155 553.5 607 50.9
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 2.6e-155 553.1 683 46.6
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 2.6e-155 553.1 612 50.7
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 3.4e-155 552.7 600 51.0
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 1.7e-154 550.4 619 50.4
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 1.9e-153 547.0 518 56.2
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 2.4e-153 546.6 506 55.3
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 3.9e-151 539.3 556 50.7
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 7.4e-150 535.0 600 50.0
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 4.8e-149 532.3 543 52.1
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 1.1e-148 531.2 643 48.1
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 1.4e-148 530.8 674 45.4
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 5.8e-147 525.4 540 52.4
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 1.7e-146 523.9 573 51.7
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 2.9e-146 523.1 563 51.7
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 3.2e-145 519.6 514 53.9
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 7.9e-144 515.0 565 51.2
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 7.4e-142 508.4 626 48.6
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 1.6e-141 507.3 550 49.5
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 2.1e-141 506.9 637 47.7
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 3.7e-141 506.1 563 50.8
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 1.1e-140 504.6 551 50.1
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 1.2e-139 501.1 520 53.8
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 2.3e-135 486.9 580 48.8
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 3.9e-135 486.1 495 53.1
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.4e-132 476.9 456 53.5
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 1.7e-130 470.7 612 45.3
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 6.5e-130 468.8 527 49.9
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 8.5e-130 468.4 639 44.1
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 1.5e-126 457.6 569 46.0
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 8.8e-119 431.8 406 52.5
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 5.0e-114 416.0 528 45.8
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 2.7e-91 340.5 448 45.5
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 9.5e-89 332.0 486 39.5
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 5.7e-86 322.8 454 41.4
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 9.5e-81 305.4 523 37.1
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 1.4e-79 301.6 582 36.1
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 1.5e-62 245.0 285 51.2
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 2.4e-55 221.1 317 40.4
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 6.4e-53 213.0 207 53.1
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 4.9e-45 186.8 571 27.5
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 9.3e-44 182.6 191 53.4
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 1.8e-31 141.7 438 29.0
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 6.4e-29 133.3 578 23.7
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 4.8e-24 117.1 366 30.6
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 4.0e-23 114.0 134 45.5
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.5e-19 100.9 96 54.2
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.5e-19 100.9 96 54.2
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 6.0e-19 100.1 96 54.2
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 6.0e-19 100.1 96 54.2
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 4.1e-15 87.4 68 63.2
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 9.3e-12 76.3 113 38.1
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 3.3e-09 67.8 201 29.9
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 4.3e-09 67.4 67 59.7
Sp5g32780 Schrenkiella parvula HOM05D004094 ORTHO05D004601 4.5e-06 57.4 325 22.2


User provided reference genes

Program Settings