Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.5e-110 402.9 208 100.0
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 4.5e-91 338.2 209 86.1
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 7.7e-91 337.4 208 87.0
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.2e-75 287.0 201 78.6
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 2.7e-75 285.8 213 78.9
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 1.3e-74 283.5 215 76.3
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 3.8e-74 282.0 214 76.2
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.9e-73 279.6 201 77.6
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 7.2e-73 277.7 219 74.4
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 2.3e-71 272.7 215 74.0
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.0e-66 257.3 149 83.9
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 1.3e-66 256.9 203 66.0
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 1.3e-66 256.9 225 65.8
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.3e-66 256.1 223 64.1
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 2.9e-66 255.8 214 65.9
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 8.6e-66 254.2 216 65.7
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 8.6e-66 254.2 214 66.4
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.5e-65 253.4 150 83.3
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.5e-65 252.7 194 72.2
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 5.5e-65 251.5 236 60.6
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 7.2e-65 251.1 216 64.4
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 2.1e-64 249.6 149 80.5
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 2.1e-64 249.6 224 62.1
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.8e-64 249.2 219 65.8
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 4.7e-64 248.4 200 66.0
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 4.7e-64 248.4 219 64.8
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 8.0e-64 247.7 149 80.5
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 8.0e-64 247.7 149 80.5
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.0e-63 247.3 149 78.5
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 1.4e-63 246.9 193 69.4
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 1.4e-63 246.9 218 63.8
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 1.4e-63 246.9 222 63.5
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 1.8e-63 246.5 217 65.9
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 2.3e-63 246.1 199 66.8
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 2.3e-63 246.1 196 66.8
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.0e-63 245.4 216 64.4
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 5.2e-63 245.0 222 62.2
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 6.8e-63 244.6 215 64.7
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 6.8e-63 244.6 216 64.4
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 8.9e-63 244.2 192 67.2
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 8.9e-63 244.2 191 67.5
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.2e-62 243.8 153 77.8
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.5e-62 243.4 142 82.4
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 2.0e-62 243.0 149 81.2
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 2.0e-62 243.0 214 62.6
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 4.4e-62 241.9 147 78.9
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 4.4e-62 241.9 179 68.7
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 5.7e-62 241.5 217 62.2
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 9.8e-62 240.7 147 77.6
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 1.7e-61 240.0 206 63.1
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 2.8e-61 239.2 212 63.7
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.8e-61 239.2 207 62.3
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 2.8e-61 239.2 207 63.3
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 2.8e-61 239.2 201 63.2
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 2.8e-61 239.2 180 67.8
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 3.7e-61 238.8 149 77.2
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 3.7e-61 238.8 149 78.5
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 1.1e-60 237.3 156 71.8
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 1.1e-60 237.3 208 61.1
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.4e-60 236.9 221 60.6
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.8e-60 236.5 212 61.8
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 7.0e-60 234.6 217 62.7
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.2e-59 233.8 136 82.4
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.2e-59 233.8 206 63.1
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.2e-59 233.8 201 61.2
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.6e-59 233.4 228 59.2
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 5.9e-59 231.5 148 75.0
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 5.9e-59 231.5 185 62.7
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 2.9e-58 229.2 153 71.2
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 5.0e-58 228.4 208 60.1
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 8.6e-58 227.6 196 61.2
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 8.6e-58 227.6 182 67.0
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 1.5e-57 226.9 170 68.2
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 2.5e-57 226.1 211 56.9
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 4.3e-57 225.3 150 71.3
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.1e-56 223.0 145 76.6
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.8e-56 222.6 194 64.4
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 3.6e-56 222.2 208 59.1
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.0e-55 220.7 217 59.9
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 4.0e-55 218.8 218 58.3
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 6.8e-55 218.0 130 82.3
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 9.8e-54 214.2 194 63.4
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 2.9e-53 212.6 151 68.9
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 8.3e-53 211.1 150 69.3
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 8.3e-53 211.1 150 69.3
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 3.2e-52 209.1 128 76.6
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 4.1e-52 208.8 169 63.3
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 7.0e-52 208.0 217 56.2
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 7.0e-52 208.0 183 60.7
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 1.2e-51 207.2 154 68.8
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 1.6e-51 206.8 174 60.9
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 4.6e-51 205.3 149 66.4
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 6.0e-51 204.9 177 62.1
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 1.3e-50 203.8 225 53.3
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 4.3e-49 198.7 135 68.1
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 1.6e-48 196.8 207 49.8
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 1.8e-47 193.4 111 84.7
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 2.3e-47 193.0 217 55.8
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 2.3e-47 193.0 159 56.6
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 1.9e-44 183.3 109 79.8
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 4.1e-44 182.2 132 63.6
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.7e-42 176.8 110 79.1
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 7.5e-38 161.4 153 60.1
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 6.2e-32 141.7 159 54.1
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.4e-31 140.6 148 58.1
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 2.4e-31 139.8 161 52.8
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 6.8e-31 138.3 152 55.9
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 6.4e-29 131.7 141 55.3
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 1.1e-28 131.0 72 83.3
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 1.2e-27 127.5 139 56.8
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 5.1e-26 122.1 153 37.3
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 1.4e-20 104.0 68 72.1
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 1.4e-20 104.0 68 72.1
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 6.9e-15 85.1 58 63.8
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.9e-12 77.0 47 76.6
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 2.7e-11 73.2 103 48.5


User provided reference genes

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