Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 7.0e-41 170.2 89 100.0
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-35 152.5 83 95.2
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 2.4e-33 145.2 89 83.1
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 8.5e-31 136.7 89 83.1
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 9.4e-30 133.3 89 82.0
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 2.7e-29 131.7 89 77.5
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 5.2e-28 127.5 89 76.4
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 2.0e-27 125.6 89 75.3
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 2.0e-27 125.6 86 76.7
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 4.4e-27 124.4 89 76.4
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 4.4e-27 124.4 89 75.3
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 4.4e-27 124.4 89 75.3
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 5.7e-27 124.0 86 74.4
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 7.5e-27 123.6 89 75.3
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 9.7e-27 123.2 89 73.0
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 1.3e-26 122.9 85 76.5
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 2.2e-26 122.1 89 73.0
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 2.8e-26 121.7 89 70.8
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 2.8e-26 121.7 89 73.0
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 3.7e-26 121.3 84 76.2
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 3.7e-26 121.3 84 76.2
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 4.8e-26 120.9 86 74.4
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 4.8e-26 120.9 89 71.9
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 4.8e-26 120.9 88 72.7
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 6.3e-26 120.6 89 74.2
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 6.3e-26 120.6 89 71.9
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 1.1e-25 119.8 89 68.5
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 1.1e-25 119.8 89 68.5
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 1.1e-25 119.8 89 69.7
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 1.4e-25 119.4 89 68.5
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 1.4e-25 119.4 89 74.2
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 1.4e-25 119.4 89 68.5
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 3.1e-25 118.2 89 70.8
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 3.1e-25 118.2 89 67.4
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 3.1e-25 118.2 89 67.4
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 4.1e-25 117.9 89 67.4
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 4.1e-25 117.9 89 73.0
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 5.3e-25 117.5 89 67.4
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 7.0e-25 117.1 89 67.4
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 9.1e-25 116.7 88 70.5
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.2e-24 116.3 89 71.9
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.2e-24 116.3 89 71.9
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.2e-24 116.3 87 69.0
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 2.0e-24 115.5 81 74.1
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 2.0e-24 115.5 86 69.8
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 2.0e-24 115.5 86 69.8
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 2.7e-24 115.2 89 71.9
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 4.5e-24 114.4 89 68.5
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 4.5e-24 114.4 89 70.8
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 7.7e-24 113.6 88 67.0
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 7.7e-24 113.6 89 65.2
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 7.7e-24 113.6 84 71.4
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 1.0e-23 113.2 84 71.4
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 1.0e-23 113.2 82 73.2
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 1.3e-23 112.8 89 69.7
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 1.7e-23 112.5 84 70.2
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 1.7e-23 112.5 88 67.0
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 2.9e-23 111.7 91 69.2
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 2.9e-23 111.7 89 65.2
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 3.8e-23 111.3 89 66.3
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 3.8e-23 111.3 86 65.1
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 5.0e-23 110.9 89 66.3
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 5.0e-23 110.9 81 71.6
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 5.0e-23 110.9 86 65.1
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 6.5e-23 110.5 85 67.1
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 6.5e-23 110.5 86 65.1
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 1.1e-22 109.8 86 65.1
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 1.1e-22 109.8 86 65.1
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 1.5e-22 109.4 82 68.3
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 5.5e-22 107.5 81 69.1
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 5.5e-22 107.5 81 69.1
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 1.6e-21 105.9 79 70.9
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 3.6e-21 104.8 86 64.0
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 6.1e-21 104.0 88 63.6
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 8.0e-21 103.6 89 64.0
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 1.8e-20 102.4 86 61.6
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 1.8e-20 102.4 82 62.2
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 1.2e-19 99.8 72 72.2
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 9.8e-19 96.7 87 62.1
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 2.2e-18 95.5 72 70.8
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 4.8e-18 94.4 74 66.2
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 6.3e-18 94.0 76 64.5
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.1e-17 93.2 73 67.1
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.8e-17 92.4 73 65.8
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 7.0e-17 90.5 83 61.4
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 1.6e-16 89.4 84 59.5
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 2.0e-16 89.0 85 56.5
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 3.5e-16 88.2 69 63.8
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 4.5e-16 87.8 82 58.5
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 5.9e-16 87.4 64 73.4
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 7.7e-16 87.0 69 63.8
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 2.3e-15 85.5 92 60.9
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 3.8e-15 84.7 61 72.1
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 1.9e-14 82.4 62 69.4
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 5.5e-14 80.9 75 58.7
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 8.0e-13 77.0 74 58.1
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.4e-12 76.3 77 57.1
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 2.3e-12 75.5 56 69.6
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 2.0e-11 72.4 83 50.6
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 5.7e-11 70.9 64 59.4
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 9.8e-11 70.1 81 48.1
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 2.0e-08 62.4 60 58.3
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 3.5e-08 61.6 56 60.7
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 2.9e-07 58.5 83 42.2
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 3.9e-07 58.2 89 49.4
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 8.6e-07 57.0 95 38.9
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 1.5e-06 56.2 72 43.1


User provided reference genes

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