Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 0.0e+00 1243.0 708 100.0
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 9.2e-237 823.9 710 67.7
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 9.5e-234 813.9 728 67.3
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 4.9e-230 801.6 714 67.6
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 1.4e-208 730.3 710 62.5
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 1.9e-205 719.9 709 61.8
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 2.8e-193 679.5 648 61.1
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 6.9e-192 674.9 637 61.9
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 1.3e-187 660.6 705 58.2
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 9.4e-181 637.9 667 56.7
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 5.0e-174 615.5 749 54.9
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 5.0e-174 615.5 749 54.9
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 4.6e-119 433.0 690 41.4
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 1.8e-115 421.0 657 41.7
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 6.8e-115 419.1 717 41.3
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 2.2e-113 414.1 678 41.4
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 1.5e-109 401.4 685 39.3
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 4.0e-107 393.3 664 40.2
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 2.2e-105 387.5 683 39.4
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 1.1e-104 385.2 645 40.8
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 1.9e-104 384.4 667 38.4
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 9.3e-104 382.1 713 39.7
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 1.7e-102 377.9 654 40.5
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 1.7e-102 377.9 686 38.6
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 5.6e-101 372.9 683 37.8
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 1.3e-100 371.7 658 38.1
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 5.3e-99 366.3 729 36.6
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 2.0e-98 364.4 631 39.3
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 1.7e-97 361.3 631 39.0
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 2.2e-97 360.9 750 38.1
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 6.4e-97 359.4 603 39.8
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 1.1e-96 358.6 676 37.0
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 3.2e-96 357.1 619 38.8
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 2.1e-95 354.4 682 37.5
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.7e-95 354.0 620 38.7
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 7.9e-95 352.4 610 38.9
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 2.1e-92 344.4 632 39.4
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 3.7e-92 343.6 692 34.0
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 9.0e-91 339.0 740 36.5
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 9.0e-91 339.0 597 38.5
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 1.2e-90 338.6 643 34.5
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 8.4e-89 332.4 621 38.3
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 1.2e-87 328.6 675 36.0
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 5.1e-86 323.2 489 39.9
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 1.3e-81 308.5 677 34.7
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 4.2e-80 303.5 678 34.8
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 4.2e-80 303.5 512 38.9
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 7.1e-80 302.8 680 34.7
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 1.2e-79 302.0 623 36.3
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 1.6e-79 301.6 669 33.8
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 2.1e-79 301.2 664 35.2
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 7.9e-79 299.3 681 34.2
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 3.0e-78 297.4 224 70.1
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 5.1e-78 296.6 673 34.9
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 5.1e-78 296.6 673 34.9
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 5.1e-78 296.6 673 34.9
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 6.7e-78 296.2 500 38.2
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 8.7e-78 295.8 621 35.3
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 4.3e-77 293.5 654 33.5
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 4.3e-77 293.5 630 36.7
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 1.3e-76 292.0 735 32.8
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 1.3e-76 292.0 304 52.3
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 1.8e-75 288.1 473 38.9
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 4.1e-75 287.0 660 33.3
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 2.6e-74 284.3 558 39.8
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 6.5e-73 279.6 670 34.9
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 8.5e-73 279.3 728 33.4
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 8.5e-73 279.3 870 30.8
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 1.1e-72 278.9 658 32.7
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 2.5e-72 277.7 712 31.2
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 3.2e-72 277.3 698 34.2
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 9.3e-72 275.8 382 42.7
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 2.1e-71 274.6 665 31.7
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 2.3e-70 271.2 748 30.9
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 1.1e-69 268.9 582 34.2
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 1.5e-69 268.5 766 30.2
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 8.2e-68 262.7 335 44.2
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 1.4e-67 261.9 476 37.0
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 1.3e-65 255.4 648 33.5
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 1.8e-62 245.0 661 31.9
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 2.3e-62 244.6 764 30.9
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 1.1e-61 242.3 751 28.4
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 1.2e-58 232.3 664 31.0
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 2.2e-57 228.0 500 34.8
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 3.8e-57 227.3 474 35.4
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 1.5e-53 215.3 751 30.2
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 1.1e-51 209.1 270 44.8
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 1.2e-50 205.7 261 44.1
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 2.5e-48 198.0 656 29.7
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 4.7e-47 193.7 707 26.6
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 1.0e-41 176.0 467 29.6
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 2.2e-36 158.3 435 31.7
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 1.7e-33 148.7 155 52.9
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.4e-27 128.3 165 49.1
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 6.6e-25 120.2 717 24.1
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 2.3e-22 111.7 279 31.2
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 4.9e-20 104.0 147 45.6
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.4e-19 101.7 363 30.9
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 5.4e-19 100.5 186 34.9
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 7.0e-19 100.1 130 46.2
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 7.0e-19 100.1 154 40.3
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 3.0e-17 94.7 266 32.3
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 1.1e-14 86.3 269 29.4
Medtr5g019630 Medicago truncatula HOM05D006140 ORTHO05D007834 3.1e-14 84.7 84 61.9
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 2.0e-13 82.0 251 31.1
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 4.4e-13 80.9 88 50.0
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 8.3e-12 76.6 590 22.2
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 2.4e-11 75.1 393 32.3
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 2.7e-10 71.6 358 26.3
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 5.0e-09 67.4 346 26.0
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 1.6e-07 62.4 125 34.4


User provided reference genes

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