Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19445 Trifolium pratense HOM05D001070 ORTHO05D002096 1.1e-90 336.7 167 100.0
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 4.1e-42 175.3 168 59.5
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 8.8e-21 104.4 161 42.9
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 2.0e-20 103.2 151 43.0
Hund27646 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.3e-20 102.4 100 50.0
Hund27834 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.3e-20 102.4 100 50.0
Hund29319 Selenicereus undatus HOM05D001070 ORTHO05D002096 3.3e-20 102.4 100 50.0
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 5.7e-20 101.7 156 39.7
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 9.7e-20 100.9 95 50.5
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 3.7e-19 99.0 176 38.1
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 3.7e-19 99.0 176 38.1
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 6.3e-19 98.2 162 40.7
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 1.1e-18 97.4 166 34.9
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 2.4e-18 96.3 174 39.1
ClCG11G009270 Citrullus lanatus HOM05D001070 ORTHO05D002096 3.1e-18 95.9 166 34.9
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 1.2e-17 94.0 174 37.9
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 2.6e-17 92.8 174 36.8
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 7.7e-17 91.3 149 42.3
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 7.7e-17 91.3 149 42.3
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 1.0e-16 90.9 175 37.1
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.0e-16 90.9 113 44.2
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 2.9e-16 89.4 164 37.8
HPP92_028431 Vanilla planifolia HOM05D001070 ORTHO05D002096 6.5e-16 88.2 144 39.6
Lju5009P0T37 Lonicera japonica HOM05D001070 ORTHO05D002096 1.1e-15 87.4 100 47.0
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.5e-15 85.1 169 36.1
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 5.5e-15 85.1 169 36.1
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.5e-15 85.1 169 36.1
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.5e-15 85.1 169 36.1
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 5.5e-15 85.1 169 36.1
Medtr5g039110 Medicago truncatula HOM05D001070 ORTHO05D002096 9.4e-15 84.3 87 52.9
HanXRQChr00c0703g0576891 Helianthus annuus HOM05D001070 ORTHO05D002096 2.7e-14 82.8 114 42.1
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-14 82.8 114 42.1
HanXRQChr08g0222861 Helianthus annuus HOM05D001070 ORTHO05D002096 2.7e-14 82.8 114 42.1
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 2.7e-14 82.8 114 42.1
HanXRQChr17g0557721 Helianthus annuus HOM05D001070 ORTHO05D002096 2.7e-14 82.8 114 42.1
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-14 82.8 114 42.1
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-14 82.8 114 42.1
PGSC0003DMG400004187 Solanum tuberosum HOM05D001070 ORTHO05D002096 1.2e-12 77.4 57 59.6
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 7.5e-12 74.7 173 35.3
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 9.1e-10 67.8 36 86.1
Nitab4.5_0000172g2260 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.2e-09 67.4 126 34.1
TAR365G0787 Trochodendron aralioides HOM05D001070 ORTHO05D002096 4.5e-09 65.5 64 50.0
Psat0s2011g0040 Pisum sativum HOM05D000729 ORTHO05D001063 5.9e-09 65.1 119 42.0
HPP92_028416 Vanilla planifolia HOM05D041394 ORTHO05D002096 2.2e-08 63.2 64 53.1
Hund29519 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.1e-07 60.8 49 55.1
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 2.1e-06 56.6 63 47.6
SGA_v2.0_scaffold140G35506 Striga asiatica HOM05D001070 ORTHO05D002096 4.7e-06 55.5 118 31.4
SEGI_13178 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 6.1e-06 55.1 61 42.6
SEGI_13637 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 6.1e-06 55.1 61 42.6
SEGI_26236 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 6.1e-06 55.1 61 42.6
SEGI_32990 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 6.1e-06 55.1 61 42.6
SEGI_36078 Sequoiadendron giganteum HOM05D000540 ORTHO05D000681 6.1e-06 55.1 61 42.6
SEGI_38716 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 6.1e-06 55.1 61 42.6
SEGI_41548 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 6.1e-06 55.1 61 42.6


User provided reference genes

Program Settings