Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 8.4e-168 593.6 295 100.0
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 3.6e-118 428.7 294 76.5
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 1.2e-105 387.1 304 70.1
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 1.1e-101 374.0 320 64.4
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 2.4e-98 362.8 307 64.2
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 3.3e-95 352.4 281 68.0
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 2.8e-94 349.4 314 63.4
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 5.2e-93 345.1 310 61.0
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 1.3e-91 340.5 278 66.5
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 1.7e-91 340.1 325 57.8
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 1.7e-91 340.1 325 57.8
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 3.7e-91 339.0 310 59.7
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 2.3e-88 329.7 312 58.3
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 4.8e-62 242.3 318 48.4
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 1.5e-60 237.3 316 46.5
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 8.4e-59 231.5 323 44.9
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 1.9e-58 230.3 322 43.5
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.7e-57 226.5 318 42.8
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 3.9e-56 222.6 313 43.1
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.9e-55 220.3 318 41.8
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 1.1e-53 214.5 314 41.1
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 1.8e-53 213.8 314 45.5
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 2.4e-53 213.4 317 41.6
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 6.9e-53 211.8 316 42.4
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 3.8e-51 206.1 302 41.4
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 7.1e-50 201.8 317 41.0
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.6e-49 200.7 306 40.8
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 2.1e-49 200.3 327 41.9
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.3e-48 197.6 313 39.6
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 1.8e-48 197.2 315 40.0
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 1.8e-48 197.2 311 39.2
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 3.3e-47 193.0 237 45.6
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 4.3e-47 192.6 313 39.0
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 5.7e-47 192.2 310 37.7
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 9.7e-47 191.4 337 37.4
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 2.2e-46 190.3 307 41.7
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 8.2e-46 188.3 331 37.2
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 5.9e-44 182.2 320 39.1
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 1.7e-43 180.6 315 39.4
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 1.1e-42 177.9 311 39.2
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 2.5e-42 176.8 286 40.9
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 4.2e-42 176.0 315 39.4
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 1.2e-41 174.5 248 45.6
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 4.6e-41 172.6 144 66.0
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 8.8e-40 168.3 300 41.7
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.5e-39 167.5 324 38.3
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 2.0e-39 167.2 272 37.9
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 4.3e-39 166.0 313 38.3
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 5.7e-39 165.6 284 37.3
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.7e-38 164.1 317 37.5
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 3.7e-38 162.9 315 38.1
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 1.1e-37 161.4 314 37.9
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 1.4e-37 161.0 320 37.5
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 5.3e-37 159.1 314 36.3
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 1.3e-35 154.5 315 35.2
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 1.3e-35 154.5 302 37.4
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.5e-34 150.2 301 35.2
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 5.5e-34 149.1 258 39.1
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 7.2e-34 148.7 339 35.7
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 3.9e-32 142.9 308 37.3
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 3.9e-32 142.9 303 37.3
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 6.7e-32 142.1 351 33.3
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 6.7e-32 142.1 320 35.3
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 1.1e-29 134.8 354 36.7
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 2.4e-29 133.7 327 35.2
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 3.1e-29 133.3 318 33.0
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 3.1e-29 133.3 304 36.8
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 9.1e-29 131.7 304 35.9
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 7.7e-28 128.6 298 36.2
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.3e-27 127.9 296 35.1
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 7.2e-26 122.1 301 33.6
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 9.4e-26 121.7 216 36.6
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 1.2e-25 121.3 208 39.4
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 1.6e-25 120.9 348 30.7
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 2.1e-25 120.6 338 32.8
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 1.0e-24 118.2 351 31.1
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 8.8e-24 115.2 291 32.6
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 2.6e-23 113.6 307 32.6
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 1.7e-22 110.9 339 30.4
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 1.4e-21 107.8 320 31.6
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 1.8e-21 107.5 324 31.8
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 8.5e-19 98.6 322 31.7
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 8.5e-19 98.6 284 34.2
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 1.9e-18 97.4 324 28.4
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 2.5e-18 97.1 301 30.2
Medtr5g029290 Medicago truncatula HOM05D007538 ORTHO05D009464 1.2e-17 94.7 129 47.3
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 6.1e-17 92.4 225 35.1
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 6.8e-16 89.0 285 31.2
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 7.5e-15 85.5 324 28.4
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 7.5e-15 85.5 328 28.0
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 1.1e-13 81.6 154 36.4
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 4.1e-13 79.7 233 31.3
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 1.1e-10 71.6 91 41.8
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 1.9e-10 70.9 183 33.9
SHI07413 Sapria himalayana HOM05D007538 ORTHO05D009464 4.8e-06 56.2 119 36.1
Aqoxy1G00983 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 6.3e-06 55.8 190 27.4


User provided reference genes

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