Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19407 Trifolium pratense HOM05D007015 ORTHO05D007679 2.1e-76 288.9 139 100.0
Psat7g184640 Pisum sativum HOM05D007015 ORTHO05D007679 5.4e-64 247.7 127 96.1
Ca_20873_v3 Cicer arietinum L. HOM05D007015 ORTHO05D007679 1.3e-62 243.0 127 94.5
Medtr4g070010 Medicago truncatula HOM05D007015 ORTHO05D007679 2.7e-60 235.3 127 92.1
Lj3g0008828 Lotus japonicus HOM05D007015 ORTHO05D007679 1.0e-54 216.9 125 88.0
Glyma.11G118100 Glycine max HOM05D007015 ORTHO05D007679 8.6e-54 213.8 125 88.0
arahy.Tifrunner.gnm1.ann1.9AGX7Y Arachis hypogaea HOM05D007015 ORTHO05D007679 2.5e-53 212.2 125 87.2
arahy.Tifrunner.gnm1.ann1.VXY3NA Arachis hypogaea HOM05D007015 ORTHO05D007679 2.5e-53 212.2 125 87.2
VMungo1127G1579 Vigna mungo HOM05D007015 ORTHO05D007679 5.6e-53 211.1 125 86.4
Phvul.011G045500 Phaseolus vulgaris HOM05D007015 ORTHO05D007679 1.0e-51 206.8 125 84.8
Glyma.12G043500 Glycine max HOM05D007015 ORTHO05D007679 6.8e-51 204.1 123 84.6
Lalb_Chr01g0002571 Lupinus albus HOM05D007015 ORTHO05D007679 1.5e-50 203.0 120 85.0
QL11p043649 Quercus lobata HOM05D007015 ORTHO05D007679 2.0e-50 202.6 123 80.5
CiPaw.05G064200 Carya illinoinensis HOM05D007015 ORTHO05D007679 2.2e-49 199.1 114 86.8
Haze_02382 Corylus avellana HOM05D007015 ORTHO05D007679 4.9e-49 198.0 122 81.1
Duzib132G0398 Durio zibethinus HOM05D007015 ORTHO05D007679 3.2e-48 195.3 121 81.0
Ciclev10028323m.g Citrus clementina HOM05D007015 ORTHO05D007679 4.1e-48 194.9 120 80.0
Dinv23523 Davidia involucrata HOM05D007015 ORTHO05D007679 7.0e-48 194.1 121 80.2
CSS0034426 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 9.2e-48 193.7 124 78.2
CSS0043793 Camellia sinensis var. sinensis HOM05D007015 ORTHO05D007679 9.2e-48 193.7 124 78.2
MD05G1066700 Malus domestica HOM05D007015 ORTHO05D007679 9.2e-48 193.7 124 76.6
Manes.15G163500 Manihot esculenta HOM05D007015 ORTHO05D007679 1.2e-47 193.4 113 84.1
Duzib052G0472 Durio zibethinus HOM05D007015 ORTHO05D007679 2.0e-47 192.6 121 80.2
Gohir.A13G034500 Gossypium hirsutum HOM05D007015 ORTHO05D007679 3.5e-47 191.8 121 79.3
Gohir.D13G032901 Gossypium hirsutum HOM05D007015 ORTHO05D007679 4.6e-47 191.4 121 79.3
Cfa005006 Carpinus fangiana HOM05D007015 ORTHO05D007679 2.3e-46 189.1 115 84.3
MD10G1076600 Malus domestica HOM05D007015 ORTHO05D007679 2.3e-46 189.1 124 76.6
Thecc.02G085800 Theobroma cacao HOM05D007015 ORTHO05D007679 2.3e-46 189.1 121 78.5
TAR625G0084 Trochodendron aralioides HOM05D007015 ORTHO05D007679 5.0e-46 188.0 113 83.2
TAR625G0285 Trochodendron aralioides HOM05D007015 ORTHO05D007679 5.0e-46 188.0 113 83.2
PGR142G1975 Punica granatum HOM05D007015 ORTHO05D007679 8.6e-46 187.2 116 79.3
Cc02_g17590 Coffea canephora HOM05D007015 ORTHO05D007679 1.1e-45 186.8 121 76.9
ECA240G3875 Erigeron canadensis HOM05D007015 ORTHO05D007679 1.1e-45 186.8 113 82.3
Gohir.D12G028100 Gossypium hirsutum HOM05D007015 ORTHO05D007679 1.1e-45 186.8 121 77.7
Nn5g29599 Nelumbo nucifera HOM05D007015 ORTHO05D007679 1.1e-45 186.8 120 80.8
Lsat_1_v5_gn_9_109600 Lactuca sativa HOM05D007015 ORTHO05D007679 1.5e-45 186.4 113 80.5
Gorai.008G028700 Gossypium raimondii HOM05D007015 ORTHO05D007679 1.9e-45 186.0 113 84.1
HanXRQChr03g0061181 Helianthus annuus HOM05D007015 ORTHO05D007679 1.9e-45 186.0 122 73.8
TAR381G1286 Trochodendron aralioides HOM05D007015 ORTHO05D007679 2.5e-45 185.7 113 82.3
Oeu020759.1 Olea europaea HOM05D007015 ORTHO05D007679 4.3e-45 184.9 122 74.6
Prupe.8G097400 Prunus persica HOM05D007015 ORTHO05D007679 4.3e-45 184.9 124 74.2
Atru.chr5.3012 Acer truncatum HOM05D007015 ORTHO05D007679 1.6e-44 183.0 120 74.2
Migut.B00238 Erythranthe guttata HOM05D007015 ORTHO05D007679 1.6e-44 183.0 122 74.6
CAN.G1412.4 Capsicum annuum HOM05D007015 ORTHO05D007679 2.8e-44 182.2 113 77.0
Gorai.013G037300 Gossypium raimondii HOM05D007015 ORTHO05D007679 3.6e-44 181.8 135 71.1
Hund00268 Selenicereus undatus HOM05D007015 ORTHO05D007679 4.7e-44 181.4 123 73.2
Potri.004G154600 Populus trichocarpa HOM05D007015 ORTHO05D007679 6.2e-44 181.0 116 77.6
FAN15G1974 Fragaria x ananassa HOM05D007015 ORTHO05D007679 8.0e-44 180.6 114 75.4
PSO700G0017 Papaver somniferum HOM05D007015 ORTHO05D007679 8.0e-44 180.6 115 76.5
GSVIVG01031963001 Vitis vinifera HOM05D007015 ORTHO05D007679 8.0e-44 180.6 122 73.0
Nn1g04999 Nelumbo nucifera HOM05D007015 ORTHO05D007679 1.0e-43 180.3 113 78.8
Peaxi162Scf00016g00829 Petunia axillaris HOM05D007015 ORTHO05D007679 1.4e-43 179.9 121 72.7
FAN20G1161 Fragaria x ananassa HOM05D007015 ORTHO05D007679 1.8e-43 179.5 114 74.6
Nitab4.5_0000308g0060 Nicotiana tabacum HOM05D007015 ORTHO05D007679 1.8e-43 179.5 121 72.7
Nitab4.5_0004172g0110 Nicotiana tabacum HOM05D007015 ORTHO05D007679 1.8e-43 179.5 116 75.9
PGSC0003DMG400000706 Solanum tuberosum HOM05D007015 ORTHO05D007679 2.3e-43 179.1 113 75.2
THA.LOC104807318 Tarenaya hassleriana HOM05D007015 ORTHO05D007679 2.3e-43 179.1 116 75.9
Sopen01g051790 Solanum pennellii HOM05D007015 ORTHO05D007679 5.2e-43 177.9 113 74.3
FvH4_2g08750 Fragaria vesca HOM05D007015 ORTHO05D007679 8.9e-43 177.2 114 73.7
Sabra04G0102600 Salix brachista HOM05D007015 ORTHO05D007679 8.9e-43 177.2 116 75.9
FAN24G0062 Fragaria x ananassa HOM05D007015 ORTHO05D007679 1.5e-42 176.4 114 73.7
Solyc01g109600.4 Solanum lycopersicum HOM05D007015 ORTHO05D007679 1.5e-42 176.4 113 73.5
Hund06231 Selenicereus undatus HOM05D007015 ORTHO05D007679 2.0e-42 176.0 121 71.9
RcHm_v2.0_Chr6g0264211 Rosa chinensis HOM05D007015 ORTHO05D007679 2.6e-42 175.6 114 72.8
TWI79G1149 Tripterygium wilfordii HOM05D007015 ORTHO05D007679 4.4e-42 174.9 114 74.6
Ah.01g019410 Amaranthus hybridus HOM05D007015 ORTHO05D007679 7.5e-42 174.1 120 71.7
Aqoxy5G01645 Aquilegia oxysepala HOM05D007015 ORTHO05D007679 7.5e-42 174.1 116 73.3
EL10Ac9g21726 Beta vulgaris HOM05D007015 ORTHO05D007679 7.5e-42 174.1 131 67.2
MSTRG.20084 Avicennia marina HOM05D007015 ORTHO05D007679 1.3e-41 173.3 124 68.5
AUR62011326 Chenopodium quinoa HOM05D007015 ORTHO05D007679 1.3e-41 173.3 129 66.7
DCAR_028986 Daucus carota HOM05D007015 ORTHO05D007679 1.3e-41 173.3 113 75.2
Rhsim11G0176800 Rhododendron simsii HOM05D007015 ORTHO05D007679 1.7e-41 172.9 113 76.1
AUR62016734 Chenopodium quinoa HOM05D007015 ORTHO05D007679 1.1e-40 170.2 129 65.9
vmacro02110 Vaccinium macrocarpon HOM05D007015 ORTHO05D007679 1.4e-40 169.9 115 73.9
SEGI_27995 Sequoiadendron giganteum HOM05D007015 ORTHO05D007679 1.9e-40 169.5 116 69.0
MSTRG.27699 Avicennia marina HOM05D007015 ORTHO05D007679 7.0e-40 167.5 123 69.9
ClCG02G005030 Citrullus lanatus HOM05D007015 ORTHO05D007679 9.2e-40 167.2 114 76.3
CDE04G3710 Ceratophyllum demersum HOM05D007015 ORTHO05D007679 1.2e-39 166.8 113 72.6
MELO3C012524.2 Cucumis melo HOM05D007015 ORTHO05D007679 1.2e-39 166.8 114 76.3
SGA_v2.0_scaffold32G13158 Striga asiatica HOM05D007015 ORTHO05D007679 1.6e-39 166.4 118 66.9
CsaV3_7G023540 Cucumis sativus L. HOM05D007015 ORTHO05D007679 4.6e-39 164.9 114 75.4
Eucgr.I01267 Eucalyptus grandis HOM05D007015 ORTHO05D007679 4.6e-39 164.9 115 70.4
MBI16_g42991_MAGBIO Magnolia biondii HOM05D007015 ORTHO05D007679 4.6e-39 164.9 117 69.2
MSTRG.5397 Avicennia marina HOM05D007015 ORTHO05D007679 7.8e-39 164.1 113 69.9
SalBow3G2347 Salvia bowleyana HOM05D007015 ORTHO05D007679 1.0e-38 163.7 110 70.9
Sc14g0002090 Simmondsia chinensis HOM05D007015 ORTHO05D007679 3.3e-37 158.7 121 66.9
Sed0022084 Sechium edule HOM05D007015 ORTHO05D007679 5.6e-37 157.9 113 72.6
unitig_744.g24247 Utricularia gibba HOM05D002700 ORTHO05D003228 7.3e-37 157.5 114 68.4
HPP92_013431 Vanilla planifolia HOM05D007015 ORTHO05D007679 9.5e-37 157.1 122 63.9
HPP92_027117 Vanilla planifolia HOM05D007015 ORTHO05D007679 9.5e-37 157.1 122 63.9
Sed0027719 Sechium edule HOM05D007015 ORTHO05D007679 2.1e-36 156.0 114 71.9
Pp3c1_20790 Physcomitrium patens HOM05D007015 ORTHO05D007679 3.1e-35 152.1 119 64.7
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 4.0e-35 151.8 103 74.8
Lj9C372G4 Lonicera japonica HOM05D007015 ORTHO05D007679 5.2e-35 151.4 156 54.5
AagrBONN_evm.TU.Sc2ySwM_117.322 Anthoceros agrestis HOM05D007015 ORTHO05D007679 2.0e-34 149.4 114 65.8
Pp3c14_3730 Physcomitrium patens HOM05D007015 ORTHO05D007679 2.0e-34 149.4 119 62.2
Lj9C370G1 Lonicera japonica HOM05D007015 ORTHO05D007679 1.7e-33 146.4 146 55.5
ATR0733G065 Amborella trichopoda HOM05D007015 ORTHO05D007679 4.1e-32 141.7 92 75.0
Zm00001eb215850 Zea mays HOM05D007015 ORTHO05D007679 9.2e-32 140.6 116 62.9
SMO367G0892 Selaginella moellendorffii HOM05D007015 ORTHO05D007679 1.6e-31 139.8 115 60.0
Os03g0723600 Oryza sativa ssp. japonica HOM05D007015 ORTHO05D007679 4.6e-31 138.3 117 58.1
CBR_g34278 Chara braunii HOM05D007015 ORTHO05D007679 2.6e-26 122.5 109 55.0
TPR.G20759 Trifolium pratense HOM05D007015 ORTHO05D007679 8.4e-09 64.3 31 100.0
SEGI_10950 Sequoiadendron giganteum HOM05D001089 ORTHO05D007679 8.7e-06 54.3 114 28.9
unitig_37.g12243 Utricularia gibba HOM05D001089 ORTHO05D000920 8.7e-06 54.3 112 34.8


User provided reference genes

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