Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19359 Trifolium pratense HOM05D007739 ORTHO05D009838 7.5e-98 360.5 185 100.0
Ca_06221_v3 Cicer arietinum L. HOM05D007739 ORTHO05D009838 4.0e-75 285.0 183 79.8
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 1.1e-59 233.8 183 68.9
Glyma.02G280600 Glycine max HOM05D007739 ORTHO05D009838 9.0e-59 230.7 185 67.6
Glyma.14G034000 Glycine max HOM05D007739 ORTHO05D009838 1.7e-57 226.5 185 65.9
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 3.8e-57 225.3 184 67.9
VMungo0647G2062 Vigna mungo HOM05D007739 ORTHO05D009838 7.6e-50 201.1 241 51.5
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 1.6e-39 166.8 185 54.6
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 4.8e-36 155.2 190 53.2
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 6.9e-35 151.4 190 49.5
Actinidia11663 Actinidia chinensis HOM05D007739 ORTHO05D009838 9.1e-35 151.0 189 50.8
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 9.1e-35 151.0 162 56.2
CiPaw.14G114800 Carya illinoinensis HOM05D007739 ORTHO05D009838 9.4e-32 141.0 191 50.3
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 7.9e-31 137.9 187 44.4
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 8.8e-30 134.4 190 44.7
PGR119G1777 Punica granatum HOM05D007739 ORTHO05D009838 2.6e-29 132.9 204 44.6
Potri.009G072000 Populus trichocarpa HOM05D007739 ORTHO05D009838 2.4e-27 126.3 192 43.2
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 1.5e-24 117.1 194 44.3
Nitab4.5_0001095g0030 Nicotiana tabacum HOM05D007739 ORTHO05D009838 2.5e-24 116.3 198 43.4
Nitab4.5_0006104g0010 Nicotiana tabacum HOM05D007739 ORTHO05D009838 3.2e-24 115.9 219 39.7
DCAR_002115 Daucus carota HOM05D007739 ORTHO05D009838 3.6e-23 112.5 193 44.0
TAR633G2358 Trochodendron aralioides HOM05D007739 ORTHO05D009838 8.8e-22 107.8 188 40.4
Sc03g0010980 Simmondsia chinensis HOM05D007739 ORTHO05D009838 2.6e-21 106.3 187 38.5
ECA233G0993 Erigeron canadensis HOM05D007739 ORTHO05D009838 4.4e-21 105.5 196 39.3
Peaxi162Scf00469g00320 Petunia axillaris HOM05D007739 ORTHO05D009838 4.4e-21 105.5 189 37.6
AL6G23160 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 9.7e-21 104.4 194 37.1
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 9.1e-19 97.8 192 35.9
Cc01_g05640 Coffea canephora HOM05D007739 ORTHO05D009838 1.2e-18 97.4 194 40.7
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 1.6e-18 97.1 191 37.2
Sopen07g027120 Solanum pennellii HOM05D007739 ORTHO05D009838 2.0e-18 96.7 204 38.7
Migut.D00651 Erythranthe guttata HOM05D007739 ORTHO05D009838 2.7e-18 96.3 197 37.1
SalBow6G6289 Salvia bowleyana HOM05D007739 ORTHO05D009838 3.5e-18 95.9 204 35.8
A10p25460 Brassica napus HOM05D007739 ORTHO05D009838 1.7e-17 93.6 188 36.2
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 1.7e-17 93.6 193 36.8
PGSC0003DMG400020420 Solanum tuberosum HOM05D007739 ORTHO05D009838 1.7e-17 93.6 200 37.5
Solyc07g055110.3 Solanum lycopersicum HOM05D007739 ORTHO05D009838 2.2e-17 93.2 198 38.4
BraA10t44610Z Brassica rapa HOM05D007739 ORTHO05D009838 1.9e-16 90.1 191 34.6
MSTRG.21351 Avicennia marina HOM05D007739 ORTHO05D009838 3.2e-16 89.4 205 37.6
Cpa.g.sc157.69 Carica papaya HOM05D007739 ORTHO05D009838 5.5e-16 88.6 183 37.7
BolC9t59287H Brassica oleracea HOM05D007739 ORTHO05D009838 1.6e-15 87.0 183 35.0
CARHR200750 Cardamine hirsuta HOM05D007739 ORTHO05D009838 8.0e-15 84.7 171 38.0
SGA_v2.0_scaffold29G12264 Striga asiatica HOM05D007739 ORTHO05D009838 8.0e-15 84.7 184 37.0
C09p64530 Brassica napus HOM05D007739 ORTHO05D009838 1.0e-14 84.3 183 34.4
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 1.4e-14 84.0 193 37.3
Oeu001493.2 Olea europaea HOM05D007739 ORTHO05D009838 2.3e-14 83.2 214 34.6
A03p38660 Brassica napus HOM05D007739 ORTHO05D009838 6.8e-14 81.6 196 33.2
BraA03t13013Z Brassica rapa HOM05D007739 ORTHO05D009838 6.8e-14 81.6 196 33.2
Lsat_1_v5_gn_5_70921 Lactuca sativa HOM05D007739 ORTHO05D009838 6.8e-14 81.6 184 35.3
Sp3g12450 Schrenkiella parvula HOM05D007739 ORTHO05D009838 3.4e-13 79.3 190 35.3
CARHR089070 Cardamine hirsuta HOM05D007739 ORTHO05D009838 5.7e-13 78.6 205 31.7
THA.LOC104815614 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 1.3e-12 77.4 186 31.7
AL3G26440 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 1.7e-12 77.0 198 32.3
C03p46780 Brassica napus HOM05D007739 ORTHO05D009838 2.8e-12 76.3 202 32.7
BolC3t16943H Brassica oleracea HOM05D007739 ORTHO05D009838 4.8e-12 75.5 202 32.2
BcaC01g03953 Brassica carinata HOM05D007739 ORTHO05D009838 6.3e-12 75.1 205 32.2
AT3G14190 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 1.1e-11 74.3 211 31.3
THA.LOC104815612 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 1.1e-11 74.3 186 31.2
Thhalv10021564m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 2.4e-11 73.2 195 32.3
BcaB04g18824 Brassica carinata HOM05D007739 ORTHO05D009838 7.0e-11 71.6 187 31.6
Carub.0003s1380 Capsella rubella HOM05D007739 ORTHO05D009838 5.9e-10 68.6 190 32.1
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 7.7e-10 68.2 61 62.3
C01p50440 Brassica napus HOM05D007739 ORTHO05D009838 7.7e-10 68.2 182 33.5
BcaNung07312 Brassica carinata HOM05D007739 ORTHO05D009838 1.0e-09 67.8 182 33.5
BolC1t04996H Brassica oleracea HOM05D007739 ORTHO05D009838 2.9e-09 66.2 193 31.6
Nn7g36621 Nelumbo nucifera HOM05D007739 ORTHO05D009838 5.0e-09 65.5 126 37.3
unitig_578.g16651 Utricularia gibba HOM05D007739 ORTHO05D009838 5.5e-08 62.0 156 35.3
Aa31LG8G1440 Aethionema arabicum HOM05D007739 ORTHO05D009838 7.2e-08 61.6 89 43.8
Eucgr.J00706 Eucalyptus grandis HOM05D007739 ORTHO05D009838 3.0e-06 56.2 58 50.0
A01p39500 Brassica napus HOM05D007739 ORTHO05D009838 4.0e-06 55.8 176 29.0


User provided reference genes

Program Settings