Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19243 Trifolium pratense HOM05D000192 ORTHO05D000123 3.0e-60 235.0 118 100.0
TPR.G25122 Trifolium pratense HOM05D000192 ORTHO05D000123 3.1e-28 128.6 75 89.3
TPR.G25143 Trifolium pratense HOM05D000192 ORTHO05D000123 1.2e-27 126.7 75 86.7
TPR.G25097 Trifolium pratense HOM05D000192 ORTHO05D000123 2.0e-27 125.9 78 87.2
TPR.G25102 Trifolium pratense HOM05D000192 ORTHO05D000123 1.1e-25 120.2 79 81.0
Medtr5g023350 Medicago truncatula HOM05D000192 ORTHO05D000123 1.4e-25 119.8 75 80.0
Medtr5g023370 Medicago truncatula HOM05D000192 ORTHO05D000123 1.6e-24 116.3 75 76.0
Medtr5g023580 Medicago truncatula HOM05D000192 ORTHO05D000123 4.6e-24 114.8 77 80.5
Medtr5g023320 Medicago truncatula HOM05D000192 ORTHO05D000123 1.0e-23 113.6 75 76.0
Medtr5g023390 Medicago truncatula HOM05D000192 ORTHO05D000123 1.3e-23 113.2 75 74.7
Medtr5g023340 Medicago truncatula HOM05D000192 ORTHO05D000123 1.7e-23 112.8 75 74.7
Medtr5g023530 Medicago truncatula HOM05D000192 ORTHO05D000123 8.7e-23 110.5 75 70.7
Medtr5g023600 Medicago truncatula HOM05D000192 ORTHO05D000123 8.7e-23 110.5 75 74.7
Medtr5g023550 Medicago truncatula HOM05D000192 ORTHO05D000123 1.5e-22 109.8 75 70.7
TPR.G28904 Trifolium pratense HOM05D000192 ORTHO05D000123 1.9e-22 109.4 76 77.6
Medtr5g023520 Medicago truncatula HOM05D000192 ORTHO05D000123 2.5e-22 109.0 76 72.4
Medtr5g023470 Medicago truncatula HOM05D000192 ORTHO05D000123 3.3e-22 108.6 75 69.3
Medtr5g023460 Medicago truncatula HOM05D000192 ORTHO05D000123 7.3e-22 107.5 75 74.7
Psat2g150800 Pisum sativum HOM05D000192 ORTHO05D000123 7.3e-22 107.5 72 81.9
Glyma.01G160800 Glycine max HOM05D000192 ORTHO05D000123 1.6e-21 106.3 79 70.9
Glyma.11G083100 Glycine max HOM05D000192 ORTHO05D000123 2.1e-21 105.9 74 75.7
TPR.G25130 Trifolium pratense HOM05D000192 ORTHO05D000123 2.8e-21 105.5 77 74.0
Glyma.01G160900 Glycine max HOM05D000192 ORTHO05D000123 1.8e-20 102.8 75 69.3
Psat0s2508g0040 Pisum sativum HOM05D000192 ORTHO05D000123 1.8e-20 102.8 72 77.8
Glyma.11G083000 Glycine max HOM05D000192 ORTHO05D000123 9.0e-20 100.5 80 66.2
Glyma.01G160500 Glycine max HOM05D000192 ORTHO05D000123 2.6e-19 99.0 79 69.6
Glyma.01G160700 Glycine max HOM05D000192 ORTHO05D000123 2.6e-19 99.0 79 69.6
Phvul.002G113600 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 2.6e-19 99.0 76 67.1
Phvul.002G113700 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 3.4e-19 98.6 76 68.4
VMungo1215G1182 Vigna mungo HOM05D000192 ORTHO05D000123 3.4e-19 98.6 76 65.8
Phvul.002G113300 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 7.6e-19 97.4 74 67.6
Psat2g150560 Pisum sativum HOM05D000192 ORTHO05D000123 9.9e-19 97.1 74 74.3
Psat2g150680 Pisum sativum HOM05D000192 ORTHO05D000123 9.9e-19 97.1 74 74.3
TPR.G17448 Trifolium pratense HOM05D000192 ORTHO05D000123 9.9e-19 97.1 73 74.0
Glyma.11G083200 Glycine max HOM05D000192 ORTHO05D000123 1.3e-18 96.7 76 67.1
Psat2g150760 Pisum sativum HOM05D000192 ORTHO05D000123 1.3e-18 96.7 76 75.0
Phvul.002G113400 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 2.9e-18 95.5 76 65.8
Glyma.11G083401 Glycine max HOM05D000192 ORTHO05D000123 1.1e-17 93.6 68 75.0
Lj2g0008788 Lotus japonicus HOM05D000192 ORTHO05D000123 1.9e-17 92.8 76 64.5
VMungo1215G2151 Vigna mungo HOM05D000192 ORTHO05D000123 7.1e-17 90.9 74 66.2
VMungo1215G2216 Vigna mungo HOM05D000192 ORTHO05D000123 9.3e-17 90.5 74 63.5
TPR.G14978 Trifolium pratense HOM05D000192 ORTHO05D000123 4.6e-16 88.2 83 60.2
VMungo1215G0125 Vigna mungo HOM05D000192 ORTHO05D000123 6.0e-16 87.8 75 61.3
Lalb_Chr05g0211981 Lupinus albus HOM05D000192 ORTHO05D000123 7.9e-16 87.4 86 61.6
Medtr8g074420 Medicago truncatula HOM05D000192 ORTHO05D000123 1.3e-15 86.7 72 63.9
VMungo0251G3742 Vigna mungo HOM05D000192 ORTHO05D000123 1.3e-15 86.7 85 60.0
Medtr8g074510 Medicago truncatula HOM05D000192 ORTHO05D000123 1.8e-15 86.3 73 61.6
TPR.G15235 Trifolium pratense HOM05D000192 ORTHO05D000123 1.8e-15 86.3 54 79.6
Glyma.02G042700 Glycine max HOM05D000192 ORTHO05D000123 3.0e-15 85.5 72 59.7
Lj2g0007645 Lotus japonicus HOM05D000192 ORTHO05D000123 3.9e-15 85.1 70 65.7
Lalb_Chr16g0391561 Lupinus albus HOM05D000192 ORTHO05D000123 5.1e-15 84.7 73 58.9
Medtr8g074450 Medicago truncatula HOM05D000192 ORTHO05D000123 5.1e-15 84.7 73 63.0
Lalb_Chr05g0211971 Lupinus albus HOM05D000192 ORTHO05D000123 1.1e-14 83.6 73 64.4
Lalb_Chr05g0212011 Lupinus albus HOM05D000192 ORTHO05D000123 1.1e-14 83.6 73 64.4
Lalb_Chr05g0229751 Lupinus albus HOM05D000192 ORTHO05D000123 1.5e-14 83.2 73 61.6
Phvul.003G268300 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 1.5e-14 83.2 87 57.5
Psat7g102560 Pisum sativum HOM05D000192 ORTHO05D000123 1.5e-14 83.2 78 60.3
arahy.Tifrunner.gnm1.ann1.3KF6VB Arachis hypogaea HOM05D000192 ORTHO05D000123 1.9e-14 82.8 84 58.3
arahy.Tifrunner.gnm1.ann1.A8GCEE Arachis hypogaea HOM05D000192 ORTHO05D000123 1.9e-14 82.8 84 58.3
Lj4g0008126 Lotus japonicus HOM05D000192 ORTHO05D000123 1.9e-14 82.8 94 50.0
Lj2g0018274 Lotus japonicus HOM05D000192 ORTHO05D000123 2.5e-14 82.4 73 61.6
Lalb_Chr09g0321351 Lupinus albus HOM05D000192 ORTHO05D000123 9.6e-14 80.5 73 58.9
Lalb_Chr05g0211991 Lupinus albus HOM05D000192 ORTHO05D000123 1.3e-13 80.1 74 64.9
TPR.G40194 Trifolium pratense HOM05D000192 ORTHO05D000123 1.3e-13 80.1 42 92.9
Lalb_Chr19g0128981 Lupinus albus HOM05D000192 ORTHO05D000123 2.1e-13 79.3 74 62.2
Lalb_Chr25g0282301 Lupinus albus HOM05D000192 ORTHO05D000123 2.8e-13 79.0 74 62.2
Psat7g102600 Pisum sativum HOM05D000192 ORTHO05D000123 2.8e-13 79.0 78 57.7
Lj2g0016809 Lotus japonicus HOM05D000192 ORTHO05D000123 3.7e-13 78.6 73 58.9
Phvul.003G268200 Phaseolus vulgaris HOM05D000192 ORTHO05D000123 3.7e-13 78.6 93 49.5
arahy.Tifrunner.gnm1.ann1.4YX886 Arachis hypogaea HOM05D000192 ORTHO05D000123 6.2e-13 77.8 71 59.2
arahy.Tifrunner.gnm1.ann1.6UEV59 Arachis hypogaea HOM05D000192 ORTHO05D000123 6.2e-13 77.8 71 59.2
arahy.Tifrunner.gnm1.ann1.8Q9CA2 Arachis hypogaea HOM05D000192 ORTHO05D000123 1.8e-12 76.3 74 58.1
QL06p052508 Quercus lobata HOM05D000192 ORTHO05D000123 1.8e-12 76.3 78 52.6
Lalb_Chr05g0212001 Lupinus albus HOM05D000192 ORTHO05D000123 3.1e-12 75.5 85 54.1
TPR.G14985 Trifolium pratense HOM05D000192 ORTHO05D000123 4.0e-12 75.1 72 58.3
arahy.Tifrunner.gnm1.ann1.03D2PE Arachis hypogaea HOM05D000192 ORTHO05D000123 1.2e-11 73.6 75 56.0
VMungo0251G0348 Vigna mungo HOM05D000192 ORTHO05D000123 2.0e-11 72.8 94 46.8
Cfa007048 Carpinus fangiana HOM05D000192 ORTHO05D000123 7.6e-11 70.9 68 60.3
Medtr5g023540 Medicago truncatula HOM05D000192 ORTHO05D000123 7.6e-11 70.9 57 63.2
Duzib147G0483 Durio zibethinus HOM05D000192 ORTHO05D000123 1.3e-10 70.1 95 46.3
Glyma.02G042800 Glycine max HOM05D000192 ORTHO05D000123 2.2e-10 69.3 87 47.1
Thecc.01G008800 Theobroma cacao HOM05D000192 ORTHO05D000123 2.2e-10 69.3 89 48.3
Duzib187G1975 Durio zibethinus HOM05D000192 ORTHO05D000123 4.2e-09 65.1 89 44.9
COL.COLO4_22518 Corchorus olitorius HOM05D000192 ORTHO05D000123 5.5e-09 64.7 89 48.3
TWI73G0614 Tripterygium wilfordii HOM05D000192 ORTHO05D000123 5.5e-09 64.7 85 43.5
Potri.005G103700 Populus trichocarpa HOM05D000192 ORTHO05D000123 9.3e-09 63.9 73 53.4
Lj2C489T14 Lonicera japonica HOM05D000192 ORTHO05D000123 1.2e-08 63.5 72 51.4
Potri.005G103600 Populus trichocarpa HOM05D000192 ORTHO05D000123 1.2e-08 63.5 73 54.8
COL.COLO4_27795 Corchorus olitorius HOM05D000192 ORTHO05D000123 1.6e-08 63.2 87 46.0
Lj2C489T15 Lonicera japonica HOM05D000192 ORTHO05D000123 1.6e-08 63.2 73 47.9
TWI09G0500 Tripterygium wilfordii HOM05D000192 ORTHO05D000123 1.6e-08 63.2 85 41.2
CiPaw.08G180200 Carya illinoinensis HOM05D000192 ORTHO05D000123 2.1e-08 62.8 72 50.0
Lj2C489T11 Lonicera japonica HOM05D000192 ORTHO05D000123 3.5e-08 62.0 72 47.2
Sabra05G0085800 Salix brachista HOM05D000192 ORTHO05D000123 6.0e-08 61.2 78 50.0
COL.COLO4_29038 Corchorus olitorius HOM05D000192 ORTHO05D000123 7.9e-08 60.8 88 44.3
arahy.Tifrunner.gnm1.ann1.B3YEKY Arachis hypogaea HOM05D000192 ORTHO05D000123 1.3e-07 60.1 79 51.9
Lj2C489T10 Lonicera japonica HOM05D000192 ORTHO05D000123 1.8e-07 59.7 72 45.8
MD15G1234800 Malus domestica HOM05D000192 ORTHO05D000123 1.8e-07 59.7 95 42.1
Prupe.7G178200 Prunus persica HOM05D000192 ORTHO05D000123 1.8e-07 59.7 67 49.3
Sabra05G0085700 Salix brachista HOM05D000192 ORTHO05D000123 1.8e-07 59.7 73 56.2
Ciclev10027282m.g Citrus clementina HOM05D000192 ORTHO05D000123 3.0e-07 58.9 81 44.4
COL.COLO4_27786 Corchorus olitorius HOM05D000192 ORTHO05D000123 3.9e-07 58.5 67 49.3
COL.COLO4_27794 Corchorus olitorius HOM05D000192 ORTHO05D000123 3.9e-07 58.5 89 46.1
Lj2C490T3 Lonicera japonica HOM05D000192 ORTHO05D000123 3.9e-07 58.5 87 42.5
COL.COLO4_27788 Corchorus olitorius HOM05D000192 ORTHO05D000123 5.1e-07 58.2 89 42.7
Dinv40164 Davidia involucrata HOM05D000192 ORTHO05D000123 5.1e-07 58.2 64 48.4
Gohir.A11G108800 Gossypium hirsutum HOM05D000192 ORTHO05D000123 5.1e-07 58.2 67 44.8
FAN23G0911 Fragaria x ananassa HOM05D000192 ORTHO05D000123 6.7e-07 57.8 93 41.9
QL02p095082 Quercus lobata HOM05D000192 ORTHO05D000123 6.7e-07 57.8 82 34.1
GSVIVG01023927001 Vitis vinifera HOM05D000192 ORTHO05D000123 1.1e-06 57.0 89 37.1
DCAR_027626 Daucus carota HOM05D000192 ORTHO05D000123 1.5e-06 56.6 64 46.9
Gohir.A12G034400 Gossypium hirsutum HOM05D000192 ORTHO05D000123 1.5e-06 56.6 67 44.8
Manes.02G112000 Manihot esculenta HOM05D000192 ORTHO05D000123 1.5e-06 56.6 64 48.4
CSS0034507 Camellia sinensis var. sinensis HOM05D000192 ORTHO05D000123 1.9e-06 56.2 93 38.7
Duzib052G0931 Durio zibethinus HOM05D000192 ORTHO05D000123 1.9e-06 56.2 71 38.0
Potri.005G103800 Populus trichocarpa HOM05D000192 ORTHO05D000123 1.9e-06 56.2 93 38.7
Thecc.02G048100 Theobroma cacao HOM05D000192 ORTHO05D000123 1.9e-06 56.2 67 44.8
CANSAT25G2374 Cannabis sativa HOM05D000192 ORTHO05D000123 2.5e-06 55.8 90 36.7
Eucgr.I02280 Eucalyptus grandis HOM05D000192 ORTHO05D000123 2.5e-06 55.8 68 44.1
Gohir.A05G176100 Gossypium hirsutum HOM05D000192 ORTHO05D000123 2.5e-06 55.8 67 41.8
MD02G1120800 Malus domestica HOM05D000192 ORTHO05D000123 2.5e-06 55.8 74 44.6
MD02G1121000 Malus domestica HOM05D000192 ORTHO05D000123 2.5e-06 55.8 90 45.6
COL.COLO4_27787 Corchorus olitorius HOM05D000192 ORTHO05D000123 3.3e-06 55.5 88 42.0
FAN26G1606 Fragaria x ananassa HOM05D000192 ORTHO05D000123 3.3e-06 55.5 93 40.9
QL93p0107_0395 Quercus lobata HOM05D000192 ORTHO05D000123 3.3e-06 55.5 76 36.8
FAN28G2601 Fragaria x ananassa HOM05D000192 ORTHO05D000123 4.3e-06 55.1 93 40.9
TAR376G1126 Trochodendron aralioides HOM05D000192 ORTHO05D000123 4.3e-06 55.1 67 38.8
QL02p095005 Quercus lobata HOM05D000192 ORTHO05D000123 5.6e-06 54.7 76 36.8
arahy.Tifrunner.gnm1.ann1.M41MI0 Arachis hypogaea HOM05D000192 ORTHO05D000123 7.4e-06 54.3 79 48.1
arahy.Tifrunner.gnm1.ann1.RD8EBH Arachis hypogaea HOM05D000192 ORTHO05D000123 7.4e-06 54.3 79 48.1
COL.COLO4_17953 Corchorus olitorius HOM05D000192 ORTHO05D000123 7.4e-06 54.3 71 39.4
Gohir.D11G113200 Gossypium hirsutum HOM05D000192 ORTHO05D000123 7.4e-06 54.3 67 41.8
Gorai.007G121700 Gossypium raimondii HOM05D000192 ORTHO05D000123 7.4e-06 54.3 67 41.8
QL02p095033 Quercus lobata HOM05D000192 ORTHO05D000123 7.4e-06 54.3 76 35.5
TAR625G0904 Trochodendron aralioides HOM05D000192 ORTHO05D000123 7.4e-06 54.3 88 37.5
Nn8g40862 Nelumbo nucifera HOM05D000192 ORTHO05D000123 9.6e-06 53.9 74 43.2


User provided reference genes

Program Settings