Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 6.8e-103 377.5 212 100.0
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 2.7e-83 312.4 212 83.0
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 2.3e-66 256.1 215 71.6
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 1.1e-63 247.3 211 59.7
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 9.0e-63 244.2 209 73.2
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 1.0e-58 230.7 212 59.9
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 1.3e-58 230.3 199 65.3
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 1.8e-58 229.9 203 63.5
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 3.7e-56 222.2 196 57.1
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 1.4e-44 183.7 184 62.5
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 3.6e-43 179.1 195 59.0
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 4.7e-43 178.7 210 52.9
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 1.8e-42 176.8 154 55.8
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 1.1e-41 174.1 195 48.7
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 1.1e-41 174.1 187 52.9
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 2.0e-41 173.3 194 51.0
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 2.6e-41 172.9 196 55.1
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 3.3e-41 172.6 191 51.8
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 1.7e-40 170.2 182 59.9
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 1.7e-40 170.2 187 49.2
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 2.2e-40 169.9 200 44.0
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 4.8e-40 168.7 191 51.8
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 6.3e-40 168.3 198 51.0
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 1.4e-39 167.2 192 56.8
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 1.4e-39 167.2 202 52.0
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 1.4e-39 167.2 194 47.4
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 5.3e-39 165.2 202 54.0
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 5.3e-39 165.2 192 57.8
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 1.2e-38 164.1 153 65.4
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 2.2e-37 159.8 191 51.8
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 3.8e-37 159.1 197 46.7
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 5.0e-37 158.7 187 57.8
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.9e-36 156.8 208 49.0
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 1.9e-36 156.8 157 51.6
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 2.5e-36 156.4 184 45.7
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 9.4e-36 154.5 152 58.6
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 2.1e-35 153.3 153 53.6
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 2.1e-35 153.3 160 62.5
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 4.7e-35 152.1 158 63.9
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 6.1e-35 151.8 191 41.4
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 1.4e-34 150.6 194 52.1
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 1.4e-34 150.6 154 50.6
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 1.8e-34 150.2 181 53.6
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 2.3e-34 149.8 154 54.5
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 4.0e-34 149.1 190 47.4
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 2.6e-33 146.4 187 57.8
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 4.4e-33 145.6 165 47.9
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 7.5e-33 144.8 165 46.1
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 7.5e-33 144.8 97 66.0
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 9.7e-33 144.4 147 66.0
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 9.7e-33 144.4 187 53.5
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 1.3e-32 144.1 161 57.1
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 1.7e-32 143.7 110 64.5
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 2.2e-32 143.3 160 51.2
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 2.2e-32 143.3 202 49.0
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 8.2e-32 141.4 153 47.1
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 1.1e-31 141.0 150 53.3
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 1.8e-31 140.2 193 40.9
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 5.3e-31 138.7 194 40.2
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 5.3e-31 138.7 146 61.0
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 9.1e-31 137.9 153 54.2
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 7.7e-30 134.8 194 49.0
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 7.7e-30 134.8 194 49.0
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 7.7e-30 134.8 194 49.0
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 1.0e-29 134.4 137 47.4
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 1.3e-29 134.0 143 54.5
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 2.2e-29 133.3 179 48.0
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 2.2e-29 133.3 195 40.0
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 8.5e-29 131.3 143 49.0
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 2.5e-28 129.8 163 49.7
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 4.2e-28 129.0 200 41.5
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 1.2e-27 127.5 134 59.7
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 2.7e-27 126.3 157 48.4
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 2.7e-27 126.3 160 42.5
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 3.6e-27 125.9 174 49.4
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 6.1e-27 125.2 99 56.6
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 6.1e-27 125.2 182 41.2
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 6.1e-27 125.2 99 56.6
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 6.1e-27 125.2 99 56.6
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 6.1e-27 125.2 195 37.9
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 8.0e-27 124.8 165 54.5
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 8.0e-27 124.8 180 47.2
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 1.4e-26 124.0 179 40.8
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 3.0e-26 122.9 194 42.3
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 1.2e-25 120.9 175 38.9
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 2.0e-25 120.2 151 43.7
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 5.7e-25 118.6 101 52.5
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 3.7e-24 115.9 100 53.0
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 3.7e-24 115.9 100 53.0
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 4.8e-24 115.5 120 51.7
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 8.3e-24 114.8 162 47.5
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 1.4e-23 114.0 100 52.0
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 2.4e-23 113.2 101 52.5
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 4.1e-23 112.5 192 38.0
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 1.0e-21 107.8 155 51.0
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 1.1e-20 104.4 100 52.0
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 1.5e-20 104.0 194 39.7
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 1.5e-20 104.0 91 47.3
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 4.2e-20 102.4 98 45.9
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 2.1e-19 100.1 63 68.3
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 4.7e-19 99.0 109 41.3
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 3.0e-18 96.3 143 48.3
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 3.4e-17 92.8 102 47.1
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 6.6e-13 78.6 62 56.5
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.4e-10 70.9 60 45.0
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 1.8e-10 70.5 99 38.4
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 7.5e-09 65.1 61 42.6
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 3.7e-08 62.8 87 46.0


User provided reference genes

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