Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19090 Trifolium pratense HOM05D000814 ORTHO05D411675 2.1e-38 162.2 98 100.0
Medtr7g095500 Medicago truncatula HOM05D000814 ORTHO05D001161 4.7e-14 81.3 88 63.6
Psat3g062280 Pisum sativum HOM05D000814 ORTHO05D001161 1.0e-13 80.1 88 65.9
Glyma.03G157000 Glycine max HOM05D000814 ORTHO05D001161 6.8e-13 77.4 61 65.6
TPR.G19109 Trifolium pratense HOM05D000814 ORTHO05D001161 1.2e-12 76.6 63 65.1
arahy.Tifrunner.gnm1.ann1.KV2ITS Arachis hypogaea HOM05D000814 ORTHO05D001161 2.0e-12 75.9 61 65.6
Glyma.19G159200 Glycine max HOM05D000814 ORTHO05D001161 4.4e-12 74.7 61 63.9
arahy.Tifrunner.gnm1.ann1.MD1FPQ Arachis hypogaea HOM05D000814 ORTHO05D001161 9.8e-12 73.6 61 63.9
Ca_08632_v3 Cicer arietinum L. HOM05D000814 ORTHO05D001161 1.3e-11 73.2 88 63.6
Phvul.001G154400 Phaseolus vulgaris HOM05D000814 ORTHO05D001161 2.2e-11 72.4 61 62.3
VMungo1383G0383 Vigna mungo HOM05D000814 ORTHO05D001161 2.2e-11 72.4 61 62.3
Lj1g0022849 Lotus japonicus HOM05D000814 ORTHO05D001161 3.7e-11 71.6 61 63.9
Cfa006185 Carpinus fangiana HOM05D000814 ORTHO05D001161 2.4e-10 68.9 60 58.3
Glyma.02G144800 Glycine max HOM05D000814 ORTHO05D001161 7.0e-10 67.4 62 61.3
Phvul.007G174400 Phaseolus vulgaris HOM05D000814 ORTHO05D001161 9.1e-10 67.0 62 61.3
VMungo0720G1592 Vigna mungo HOM05D000814 ORTHO05D001161 1.6e-09 66.2 62 59.7
Lj5g0007657 Lotus japonicus HOM05D000814 ORTHO05D001161 3.5e-09 65.1 65 56.9
COL.COLO4_09048 Corchorus olitorius HOM05D000814 ORTHO05D001161 5.9e-09 64.3 60 56.7
TPR.G25711 Trifolium pratense HOM05D000814 ORTHO05D001161 5.9e-09 64.3 89 60.7
Gohir.A12G003000 Gossypium hirsutum HOM05D000814 ORTHO05D001161 7.7e-09 63.9 60 56.7
Lalb_Chr06g0162821 Lupinus albus HOM05D000814 ORTHO05D001161 7.7e-09 63.9 89 59.6
Thecc.01G272800 Theobroma cacao HOM05D000814 ORTHO05D001161 1.0e-08 63.5 60 56.7
QL12p020409 Quercus lobata HOM05D000814 ORTHO05D001161 1.3e-08 63.2 61 55.7
Haze_04658 Corylus avellana HOM05D000814 ORTHO05D001161 1.7e-08 62.8 61 54.1
Gohir.D12G002700 Gossypium hirsutum HOM05D000814 ORTHO05D001161 1.7e-08 62.8 60 55.0
Gorai.008G002500 Gossypium raimondii HOM05D000814 ORTHO05D001161 1.7e-08 62.8 60 55.0
Glyma.10G029300 Glycine max HOM05D000814 ORTHO05D001161 2.2e-08 62.4 90 60.0
Duzib133G0521 Durio zibethinus HOM05D000814 ORTHO05D001161 2.9e-08 62.0 60 56.7
TWI12G0611 Tripterygium wilfordii HOM05D000814 ORTHO05D001161 3.8e-08 61.6 60 53.3
Psat6g059240 Pisum sativum HOM05D000814 ORTHO05D001161 5.0e-08 61.2 92 56.5
Duzib211G0103 Durio zibethinus HOM05D000814 ORTHO05D001161 6.5e-08 60.8 59 54.2
Gohir.D08G073100 Gossypium hirsutum HOM05D000814 ORTHO05D001161 1.5e-07 59.7 60 53.3
Gohir.A08G066700 Gossypium hirsutum HOM05D000814 ORTHO05D001161 2.5e-07 58.9 60 53.3
PGR044G2656 Punica granatum HOM05D000814 ORTHO05D001161 2.5e-07 58.9 60 50.0
arahy.Tifrunner.gnm1.ann1.K5B77E Arachis hypogaea HOM05D000814 ORTHO05D001161 3.2e-07 58.5 71 50.7
Manes.05G080600 Manihot esculenta HOM05D000814 ORTHO05D001161 4.2e-07 58.2 62 51.6
Sed0024326 Sechium edule HOM05D000814 ORTHO05D001161 5.5e-07 57.8 61 52.5
MD11G1279900 Malus domestica HOM05D000814 ORTHO05D001161 9.4e-07 57.0 61 49.2
Cpa.g.sc52.111 Carica papaya HOM05D000814 ORTHO05D001161 1.2e-06 56.6 63 52.4
RcHm_v2.0_Chr6g0290221 Rosa chinensis HOM05D000814 ORTHO05D001161 6.1e-06 54.3 63 46.0
Lsat_1_v5_gn_5_184701 Lactuca sativa HOM05D000814 ORTHO05D001161 8.0e-06 53.9 58 48.3


User provided reference genes

Program Settings