Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 0.0e+00 1372.5 707 100.0
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 0.0e+00 1276.2 707 93.1
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 0.0e+00 1268.8 707 93.1
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 0.0e+00 1209.5 707 88.4
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 0.0e+00 1207.2 708 87.9
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 0.0e+00 1206.8 710 87.9
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 0.0e+00 1196.0 707 86.8
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 0.0e+00 1179.9 709 86.3
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 0.0e+00 1167.5 707 85.9
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 0.0e+00 1104.0 794 74.4
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 5.5e-290 1000.7 588 89.1
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 3.9e-288 994.6 718 72.0
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 8.8e-288 993.4 730 72.7
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 5.7e-287 990.7 722 73.0
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 1.2e-281 973.0 719 71.2
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 2.0e-279 965.7 718 72.0
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 9.7e-279 963.4 718 72.0
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 1.4e-277 959.5 715 71.2
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 7.0e-277 957.2 729 70.2
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 9.1e-277 956.8 727 70.6
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 1.2e-276 956.4 731 70.5
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 1.0e-275 953.4 709 72.1
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 8.5e-275 950.3 722 70.5
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 9.4e-274 946.8 719 69.4
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 2.1e-273 945.7 717 71.0
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 3.6e-273 944.9 713 70.8
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 1.8e-272 942.6 727 70.4
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 7.5e-271 937.2 722 69.4
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 9.1e-269 930.2 729 69.5
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 2.9e-267 925.2 725 70.6
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 6.5e-267 924.1 718 69.9
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 4.7e-265 917.9 718 68.8
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 1.2e-263 913.3 714 69.3
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 5.7e-263 911.0 715 68.4
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 9.8e-263 910.2 713 69.3
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 1.7e-262 909.4 721 68.2
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 2.2e-262 909.1 733 67.4
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.7e-262 908.3 716 69.7
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 2.4e-261 905.6 716 69.4
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.1e-261 905.2 716 69.1
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 3.1e-261 905.2 715 69.0
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 4.1e-261 904.8 716 69.1
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 5.4e-261 904.4 716 69.3
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 3.8e-259 898.3 708 68.8
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 1.1e-258 896.7 720 68.2
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 3.2e-258 895.2 726 66.7
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 7.2e-258 894.0 708 68.4
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.1e-257 892.5 708 68.5
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 8.8e-256 887.1 718 66.7
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 4.4e-255 884.8 717 68.6
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 5.7e-255 884.4 724 67.0
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.5e-252 874.8 721 66.2
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 1.0e-248 863.6 709 65.9
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 2.6e-247 859.0 722 64.3
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 3.7e-246 855.1 707 65.6
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 4.9e-246 854.7 636 70.8
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 9.2e-245 850.5 731 63.6
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 2.3e-243 845.9 736 64.0
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 2.5e-242 842.4 713 64.5
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 1.6e-241 839.7 939 53.4
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 8.0e-241 837.4 712 65.0
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 3.4e-239 832.0 529 81.7
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 2.2e-238 829.3 720 61.9
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 1.1e-237 827.0 719 63.1
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.1e-237 827.0 732 62.4
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 2.0e-236 822.8 722 62.2
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 3.9e-235 818.5 720 61.8
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 1.1e-234 817.0 721 62.1
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 1.9e-234 816.2 593 72.8
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 5.6e-234 814.7 724 61.2
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 5.2e-232 808.1 716 61.6
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 1.5e-231 806.6 723 61.7
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 2.6e-231 805.8 720 61.5
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 3.4e-231 805.4 721 60.7
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 1.3e-230 803.5 711 63.6
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 2.9e-230 802.4 709 62.5
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 2.7e-228 795.8 703 63.0
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 3.5e-228 795.4 711 62.2
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 1.0e-227 793.9 924 51.6
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 7.3e-226 787.7 742 60.4
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 4.7e-225 785.0 768 57.4
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 1.4e-224 783.5 726 60.5
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 4.0e-224 781.9 720 61.1
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 5.2e-224 781.6 719 60.4
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 7.6e-223 777.7 726 59.4
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 9.2e-221 770.8 720 60.0
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 2.7e-220 769.2 724 59.4
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 4.6e-220 768.5 720 59.9
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 7.8e-220 767.7 720 59.7
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 4.3e-218 761.9 721 59.6
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 1.8e-216 756.5 729 58.6
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 5.2e-216 755.0 744 57.8
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 2.9e-214 749.2 720 59.2
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 4.6e-212 741.9 714 59.1
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 3.4e-207 725.7 547 71.8
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 3.2e-205 719.2 739 57.0
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 1.9e-202 709.9 735 54.6
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 3.7e-201 705.7 727 54.7
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 7.1e-197 691.4 624 61.7
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.1e-196 689.9 578 66.6
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 5.6e-194 681.8 619 61.4
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 6.2e-193 678.3 709 56.3
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 3.1e-176 622.9 598 59.0
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 1.5e-170 604.0 592 57.6
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 1.4e-155 554.3 515 59.2
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 3.3e-133 479.9 767 41.7
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 6.8e-131 472.2 793 40.2
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 5.8e-122 442.6 461 57.7
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 4.0e-115 419.9 709 38.4
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 2.1e-103 380.9 291 68.0
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 3.4e-98 363.6 265 68.3
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 3.1e-91 340.5 451 49.0
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 4.0e-75 287.0 447 43.0
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.3e-70 271.2 313 55.0
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 2.4e-59 234.6 369 43.6
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.7e-57 228.4 182 67.6
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 1.0e-54 219.2 186 61.8
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 1.8e-51 208.4 153 73.2
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 3.2e-48 197.6 283 46.3
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 1.7e-41 175.3 133 69.2
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 2.5e-40 171.4 156 54.5
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 1.2e-39 169.1 107 84.1
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 1.2e-39 169.1 126 72.2
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.2e-37 162.5 97 84.5
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 9.1e-35 152.9 126 62.7
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.5e-32 145.6 144 57.6
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 3.3e-24 117.9 150 46.7
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 5.4e-19 100.5 107 49.5
unitig_736.g22376 Utricularia gibba HOM05D005929 ORTHO05D425945 1.8e-06 58.9 72 48.6
CAN.G363.39 Capsicum annuum HOM05D005929 ORTHO05D007869 3.1e-06 58.2 140 32.9
MBI16_g22817_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 6.8e-06 57.0 35 80.0


User provided reference genes

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