Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19016 Trifolium pratense HOM05D007434 ORTHO05D009541 1.4e-44 182.6 92 100.0
Lj4g0021906 Lotus japonicus HOM05D007434 ORTHO05D009541 6.1e-16 87.4 93 54.8
Phvul.003G245500 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 1.1e-12 76.6 88 53.4
Lalb_Chr05g0226641 Lupinus albus HOM05D007434 ORTHO05D009541 1.8e-12 75.9 93 51.6
Lalb_Chr09g0333721 Lupinus albus HOM05D007434 ORTHO05D009541 9.2e-12 73.6 91 51.6
Glyma.05G084000 Glycine max HOM05D007434 ORTHO05D009541 3.5e-11 71.6 88 52.3
Phvul.002G020200 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 1.0e-10 70.1 100 49.0
Lalb_Chr05g0213231 Lupinus albus HOM05D007434 ORTHO05D009541 1.3e-10 69.7 95 49.5
Lj2g0026149 Lotus japonicus HOM05D007434 ORTHO05D009541 1.7e-10 69.3 95 49.5
Glyma.11G057300 Glycine max HOM05D007434 ORTHO05D009541 2.3e-10 68.9 96 53.1
Glyma.17G176700 Glycine max HOM05D007434 ORTHO05D009541 8.6e-10 67.0 89 51.7
Medtr5g017710 Medicago truncatula HOM05D007434 ORTHO05D009541 8.6e-10 67.0 98 46.9
Glyma.01G184900 Glycine max HOM05D007434 ORTHO05D009541 1.5e-09 66.2 95 50.5
MELO3C007552.2 Cucumis melo HOM05D007434 ORTHO05D009541 5.6e-09 64.3 88 44.3
arahy.Tifrunner.gnm1.ann1.0D7IHD Arachis hypogaea HOM05D007434 ORTHO05D009541 7.3e-09 63.9 86 44.2
CsaV3_6G043150 Cucumis sativus L. HOM05D007434 ORTHO05D009541 3.6e-08 61.6 88 43.2
arahy.Tifrunner.gnm1.ann1.T0173K Arachis hypogaea HOM05D007434 ORTHO05D009541 4.7e-08 61.2 82 43.9
Lalb_Chr09g0323081 Lupinus albus HOM05D007434 ORTHO05D009541 4.7e-08 61.2 94 44.7
ClCG01G016730 Citrullus lanatus HOM05D007434 ORTHO05D009541 1.8e-07 59.3 94 41.5
Glyma.17G176500 Glycine max HOM05D007434 ORTHO05D009541 1.8e-07 59.3 97 43.3
TPR.G21269 Trifolium pratense HOM05D007434 ORTHO05D009541 5.2e-07 57.8 96 39.6
Gorai.003G021800 Gossypium raimondii HOM05D007434 ORTHO05D009541 8.9e-07 57.0 80 43.8
Gohir.A02G159900 Gossypium hirsutum HOM05D007434 ORTHO05D009541 1.2e-06 56.6 80 43.8
Gohir.D03G020700 Gossypium hirsutum HOM05D007434 ORTHO05D009541 1.2e-06 56.6 80 43.8
Glyma.05G083900 Glycine max HOM05D007434 ORTHO05D009541 1.5e-06 56.2 95 43.2
Phvul.003G245601 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 2.0e-06 55.8 95 44.2
COL.COLO4_11386 Corchorus olitorius HOM05D007434 ORTHO05D009541 2.6e-06 55.5 86 43.0
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 2.6e-06 55.5 93 40.9
Sed0015330 Sechium edule HOM05D007434 ORTHO05D009541 3.4e-06 55.1 90 40.0
Sed0003827 Sechium edule HOM05D007434 ORTHO05D009541 5.7e-06 54.3 98 40.8
A07p17070 Brassica napus HOM05D012520 ORTHO05D013638 7.5e-06 53.9 91 40.7
BraA07t29434Z Brassica rapa HOM05D012520 ORTHO05D013638 7.5e-06 53.9 91 40.7
Actinidia12058 Actinidia chinensis HOM05D007434 ORTHO05D009541 9.8e-06 53.5 35 65.7
FAN23G2206 Fragaria x ananassa HOM05D007434 ORTHO05D009541 9.8e-06 53.5 102 41.2


User provided reference genes

Program Settings