Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19009 Trifolium pratense HOM05D006144 ORTHO05D006357 2.1e-143 512.3 248 100.0
Psat4g089200 Pisum sativum HOM05D006144 ORTHO05D006357 6.8e-86 321.2 238 68.9
Ca_22186_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 4.5e-45 185.7 228 46.9
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 1.5e-29 134.0 101 61.4
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 3.2e-27 126.3 241 36.9
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 4.2e-27 125.9 100 59.0
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 4.2e-27 125.9 100 58.0
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 6.1e-26 122.1 101 59.4
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 7.9e-26 121.7 101 58.4
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 1.3e-25 120.9 103 56.3
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 3.0e-25 119.8 103 56.3
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 6.7e-25 118.6 101 59.4
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 8.7e-25 118.2 100 58.0
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 1.3e-23 114.4 158 41.1
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 4.1e-22 109.4 103 55.3
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 3.8e-20 102.8 104 44.2
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 9.4e-19 98.2 173 38.7
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 6.1e-18 95.5 104 43.3
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 1.1e-16 91.3 116 44.8
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 1.1e-16 91.3 118 41.5
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 2.5e-16 90.1 111 43.2
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 7.4e-16 88.6 116 41.4
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 1.7e-15 87.4 116 43.1
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 2.2e-15 87.0 124 39.5
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 3.7e-15 86.3 124 40.3
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 3.7e-15 86.3 124 39.5
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 3.7e-15 86.3 132 37.1
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 8.2e-15 85.1 217 32.7
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 1.1e-14 84.7 106 36.8
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 1.8e-14 84.0 106 36.8
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 2.0e-13 80.5 107 37.4
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 7.7e-13 78.6 105 34.3
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 1.3e-12 77.8 213 31.5
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 1.3e-12 77.8 114 41.2
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 1.3e-12 77.8 107 33.6
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 3.8e-12 76.3 104 35.6
Cpa.g.sc55.178 Carica papaya HOM05D006144 ORTHO05D006357 6.5e-12 75.5 248 27.8
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 6.5e-12 75.5 130 35.4
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 6.5e-12 75.5 100 42.0
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 8.5e-12 75.1 170 34.7
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 9.4e-11 71.6 122 34.4
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 9.4e-11 71.6 104 35.6
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 3.6e-10 69.7 91 40.7
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 2.3e-09 67.0 114 35.1
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 5.1e-09 65.9 104 31.7
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 1.5e-08 64.3 70 41.4
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 1.5e-08 64.3 101 28.7
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 3.3e-08 63.2 125 36.8
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 3.3e-08 63.2 117 35.9
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 4.4e-08 62.8 65 43.1
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 5.7e-08 62.4 65 41.5
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 7.4e-08 62.0 132 29.5
Sabra05G0109200 Salix brachista HOM05D006144 ORTHO05D006357 9.7e-08 61.6 82 40.2
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.3e-07 61.2 91 35.2
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.2e-07 60.5 105 31.4
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 2.8e-07 60.1 115 33.0
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 2.8e-07 60.1 107 35.5
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 1.4e-06 57.8 176 32.4
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.4e-06 57.8 97 32.0
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 1.4e-06 57.8 109 34.9
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.8e-06 57.4 97 33.0
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 2.4e-06 57.0 69 36.2
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 2.4e-06 57.0 69 36.2
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 3.1e-06 56.6 77 39.0
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 5.3e-06 55.8 103 34.0


User provided reference genes

Program Settings