Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19008 Trifolium pratense HOM05D010906 ORTHO05D011864 1.5e-47 192.6 99 100.0
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 1.3e-11 73.2 111 42.3
Ca_21180_v3 Cicer arietinum L. HOM05D010906 ORTHO05D011864 2.2e-11 72.4 81 53.1
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 8.3e-11 70.5 116 44.0
Lalb_Chr05g0213241 Lupinus albus HOM05D008581 ORTHO05D011864 1.4e-10 69.7 112 49.1
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 4.1e-10 68.2 106 45.3
Glyma.11G057100 Glycine max HOM05D008581 ORTHO05D011864 1.2e-09 66.6 103 47.6
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 2.3e-08 62.4 110 50.9
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 2.3e-08 62.4 110 50.9
Ca_21178_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 3.9e-08 61.6 113 46.0
Ca_22185_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 3.9e-08 61.6 113 46.0
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 3.9e-08 61.6 111 37.8
Phvul.002G020000 Phaseolus vulgaris HOM05D008581 ORTHO05D011864 4.3e-07 58.2 103 44.7
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 5.6e-07 57.8 125 38.4
A04p17870 Brassica napus HOM05D010906 ORTHO05D011864 5.6e-07 57.8 102 42.2
BraA04t17407Z Brassica rapa HOM05D010906 ORTHO05D011864 5.6e-07 57.8 102 42.2
arahy.Tifrunner.gnm1.ann1.HVX4VE Arachis hypogaea HOM05D010906 ORTHO05D011864 7.3e-07 57.4 100 39.0
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 7.3e-07 57.4 119 42.9
VMungo1215G0067 Vigna mungo HOM05D008581 ORTHO05D011864 9.5e-07 57.0 108 44.4
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 1.6e-06 56.2 115 40.0
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 1.6e-06 56.2 111 39.6
arahy.Tifrunner.gnm1.ann1.7MI303 Arachis hypogaea HOM05D010906 ORTHO05D011864 2.8e-06 55.5 100 38.0
Glyma.01G185100 Glycine max HOM05D008581 ORTHO05D009966 2.8e-06 55.5 106 43.4
BcaB06g27898 Brassica carinata HOM05D010906 ORTHO05D011864 3.6e-06 55.1 102 41.2
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 3.6e-06 55.1 113 36.3
Lsat_1_v5_gn_4_167560 Lactuca sativa HOM05D008581 ORTHO05D009966 4.7e-06 54.7 100 37.0
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 4.7e-06 54.7 122 40.2
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 6.2e-06 54.3 127 37.0
A09p56910 Brassica napus HOM05D010906 ORTHO05D011864 6.2e-06 54.3 99 37.4
C08p39870 Brassica napus HOM05D010906 ORTHO05D011864 6.2e-06 54.3 99 37.4
BolC8t51559H Brassica oleracea HOM05D010906 ORTHO05D011864 6.2e-06 54.3 99 37.4
BraA09t41083Z Brassica rapa HOM05D010906 ORTHO05D011864 6.2e-06 54.3 99 37.4


User provided reference genes

Program Settings